Crocodylus porosus (Australian saltwater crocodile): 109306460
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Entry
109306460 CDS
T07440
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109306460 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoo01009
]
109306460 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109306460 (PCDH9)
Protein phosphatases and associated proteins [BR:
cpoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109306460 (PCDH9)
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109306460 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
109306460
NCBI-ProteinID:
XP_019385356
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTST
SLVYRLVSKAGDAPLVRVSSTTGEIFTTSNRIDREKLCAGVSYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQALNFGDMP
KYLWEIWVPEKPWVSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDE
FYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQ
QPKSPLSTFAPQKEWVKKDKLVNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNAGNHMT
DIPLANLKSYKQASGAVESPKEHQL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttgaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgccagaaaatgtgcccata
gggaacataccaaaggatctgaacatttctcatatcaatgctgccacagggaccagcacc
agcctcgtctacagactggtgtctaaagccggggatgcccctttggttagagtgtccagc
accaccggagaaatcttcaccacctcgaatcgaatagacagagaaaaactctgtgctgga
gtctcctatgctgaggaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttctttaggctgatcaaaataaaaatcatcgtaaaggataccaatgacaatgcaccc
atgtttccatctcctgtcatcaatatctccataccagaaaacactttgatcaacagccgc
tttccgattccatcagccacagatcctgatactgggttcaacggggtgcagcactatgag
ttgttaaatgggcagagcgtctttggactggatatcgtggaaactcctgaaggagagaaa
tggcctcaactcattgtgcagcagaacttggatagagagcagaaagacacctatgtgatg
aaaattaaagtagaagatggagggagccctcagaaatccagcacagccatactgcaagtc
acagtaagtgatgtcaatgataacaggcctgtttttaaagagagtcaggtggaggttcat
atccctgagaatgcccctgtgggtacctctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagttgcccctgcaaccaaa
agactctttgctctaaacaacactacaggactgataacagttcagaggtccttagatcga
gaagagactgctattcacaaggtgacagtcctggcaagtgatggcagctctactccagct
cgggcaactgttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcctatcaatggcacagtgtacttgtctgagaaagatcctgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctggcaagcccagtctgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcggaag
acgggtgttttaacagcgtccagagtttttgacagagaagagcaagaacgtttcattttt
actgttacggccagggacaatggcacccctcctctgcagagtcaggcagctgtgattgtt
actgtactggatgaaaatgataacagtcccaaatttactcataatcactttcagtttttt
gtatctgagaatttaccaaagtatagtactgtgggggtgatcacagtgactgatgcagat
gcaggggaaaataaagcagtgaccctttccatcctgaatgacaacgagaactttgtgctg
gatccttactctggagttatcaagtccaatgtttcttttgatcgagaacagcagagctct
tacacctttgatgtcaaggccgttgatggaggacagcctcctcgttcttctacagcaaaa
gtaacaataaatgtcatggatgttaatgataatagcccggttgtcatttacccaccttct
aatacttcgtttaagctggtgccactctcggcaatcccaggctcagtagtagcagaagtg
tttgctgtggatatagacactggaatgaatgctgagcttaaatatacaattgtgagtgga
aataacaaaggtttatttcgtattgatccagtgacaggtaacattactctggaagaaaaa
ccagctcctactgatgtgggactgcatcgtctagttgtcaacataagtgatttgggttat
cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttacatttatgacctgatacgcaggactatggaaacgcccttggaccggaacata
ggggacagtagccaaccctatcaaaatgaggactatctgaccatcatgatcgctatcgtg
gcaggtgcgatggttgtcatagtggtgatatttgtcacggttctggttcgctgtcgacat
gcgtctaggttcaaagcagcacagaggagcaagcaaggtgctgaatggatgtctcccaat
caggagaacaagcagaacaagaaaaagaaaaggaagaaaaggaagtctcctaagagctct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgaccttgcaaagcattacaaa
tctgcttccccacagtctgcttttcatcttaaacctgacactccagtttcagtgaaaaag
catcatgtgattcaggaacttcccttggacaacacctttgttggtggttgcgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggcactgaattttggagatatgccg
aagtacttgtgggagatttgggtacctgagaaaccatgggtgtcccagcgccgtgttaca
tttcacctccctgatggctcccaggaaagctgcagtgacagtggtctaggagaccatgag
cctgtgggtagtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaa
ttctatgaccaggcctcaccggacaagaggactgaagctgatggcaactcggaccccaac
tctgatgggcctcttggtccacgaggattagctgaagccacagaaatgtgcactcaagaa
tgcctagttttgggtcactctgataactgttggatgcctcctggcctgggtccataccag
cagccaaagtctcctctctccacctttgcacctcaaaaagaatgggttaagaaggacaaa
ctagtgaatggacacacattaacaagaacctggaaagaagatagcaacagaaaccagttc
agtgatcgaaagcagtatggttccagtgagggccatttcaacgctggcaatcacatgact
gatattcctttggctaacttgaagtcttataaacaggcttcaggagctgttgagagtcca
aaggaacaccagctataa
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integrated database retrieval system
