Crocodylus porosus (Australian saltwater crocodile): 109306992
Help
Entry
109306992 CDS
T07440
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109306992 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRA2_N
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
109306992
NCBI-ProteinID:
XP_019386161
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MTRKRSCAHVCASLYLHVHASLCAHVCEHLCLHVDASVPTCTGLCIHVCPRVRASVCAAA
YVSGGAGTEGGAVPAAGSRASQELRYTREKLGEAAAYTAQMLIQTARPAGANLLTPAALR
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLCYKSGVPVIENGMIERMIEKLFPCM
ILTPLDCFWDGAKLQGGSAYLPGRPDIRWSNLDPRQLMEELGQFTPLEGFRELLDKAEVG
QAYMGRPCLQPSDAQCPPSAPNRRTQQSPDVAAELAGGCHGFSRKFMRWHEELILGGATR
DPQGRLQSAEALQSMFLLMSPRQLYEHFKDDYEIHDLNWSEEKAGAILEAWQRAFVEVAQ
AAVPGNSSQVVHAFSSATLSDIMKSFSDVSAVRVAGGYLLMLAYACVTMLRWDCAKSQGA
VGLAGVLLVALSVASGLGLCSLLGIAFNAATTQVLPFLALGIGVDDMFLLAHAFPKAGPH
VPFKVRPPCRGWEGMGCLDPPSPLGAPGPGGPVQALARCDTAGQRVVTVLPPTPASSTRD
LLAQLDEASGAPTCLPLPACRWDLAHFARRKYAPLLLRAHSKGVVALLFVGLLGLSLYGA
TQVRDGLALTDVVPRGTAAHAFLAAQAHYFSSYHAFVVTTGGFHYPGAQAALLGLHRALG
TLRHVVRGPDRQLPRMWLHYFQDWLRGLQVAFDREWASGRITRDSYRNGSEDGALAYKLL
IQTGNPQQPLDYDQLTTRRLVDADGLVPPDTFYISLTVWASNDPLGLAASQANFYPPPPE
WVHDKYDATGENLRIPAAQPLEFAQVPFYLSGLRHTADFVEAIEGVRAVCEEAARRHGVR
SYPSGDPFLFWEQYLGLRRWLLLALSIALACTFLVCALLLLNPWTAGIIVLVLAMMTVEL
FGLMGLMGIKLSAVPVVILIASVGIGVEFTVHVALGFLTAVGSRDRRSALALEHVFAPVL
DGGISTLLGVLMLASSEFDFIMRYFFSVLSVLTVLGLLNGLVLLPVLLSVIGPPAEVPPV
DNSSRLPSPEPLPPPIAHHGFYVGRPSAWHSPDAAPEAPPAAGPGNEDSPGSAQACILLQ
AGKDPRFPCITVVKAFEVGPEPLGQEPTAGDRPPRAHPTAPPPTYATVTATASVTLALHP
SLPGAARGYAHAAFEDSESDSHEDPPGAQHTRHGCHATATSR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgacacggaagcggtcgtgtgcccacgtgtgtgccagcctgtatctgcatgtgcacgca
tctctgtgtgcacatgtgtgcgagcatctgtgtctacatgtggatgcatccgtgcccacg
tgtacaggcctctgcatccatgtgtgcccgcgtgtgcgcgcgagtgtgtgcgcggccgcg
tacgtgtctggcggggccggcactgagggcggcgctgtgcccgcagccggcagccgcgcg
agccaggagctgcgctacacgcgggagaagctgggcgaggcggcggcctacacggcacag
atgctgatccagacggcgcgccccgccggcgccaacctgctcacgcccgccgcgctgcgc
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaagctgtgctacaagtcgggc
gtgcccgtcatcgagaacggcatgatcgagcggatgatcgagaagctcttcccgtgcatg
atcctgacgcccctcgactgcttctgggacggcgccaagctgcaggggggctccgcctac
ctcccgggccgccccgacatccgctggagcaacctggacccccggcagctgatggaggag
ctggggcagttcacgccgctcgagggcttccgggagctgctggacaaagcggaggtgggg
caggcctacatggggcggccctgcctgcagcccagcgacgcccagtgcccccccagcgcc
cccaaccgccgcacccagcagagccctgacgtggcagccgagctggccggcggctgccac
ggcttctcccgcaagttcatgcggtggcacgaggagctgatcctgggcggcgccaccagg
gacccgcagggccggctgcagagcgccgaggccctgcagagcatgttcctgttgatgagc
ccgcggcagctgtacgagcacttcaaggacgactacgagatccacgacctcaactggagc
gaggagaaggcgggcgccatcctggaggcctggcagcgggccttcgtggaggtggcgcag
gccgcggtcccggggaacagctcgcaggtggtccacgccttctccagcgccacgctgagt
gacatcatgaagtccttctccgacgtcagcgccgtgcgcgtggccggcggctacctcctt
atgctggcctacgcctgcgtgaccatgctgcgctgggactgcgccaagtcgcagggcgcc
gtgggcctggccggcgtcctgctcgtggccctgtccgtggcctccggccttgggctctgc
tccttgctcggcatcgccttcaacgcggccaccacgcaggtgctgcccttcctggcgctg
ggcatcggtgtggatgacatgttcctgctggcgcacgccttccccaaagccggtccccac
gtccccttcaaggtgaggcccccgtgccgggggtgggaagggatgggctgcttggacccc
ccctccccactgggggcaccgggcccagggggcccggtgcaagccctggcccggtgcgac
accgcagggcagcgcgtggtcacagtcctgccgcccacgcccgccagctccacccgcgac
ctgctggcccagctggacgaggcctcgggggcgcccacctgcctacctctgccagcctgc
cgctgggacctggcccacttcgcccgccgcaagtatgcgccactgctgctgcgggcgcac
agcaagggcgtggtggcactgctgttcgtcgggctgctggggctgagcctgtacggcgcg
acgcaggtgcgggacgggctggcactgacagacgtggtgccgcgaggcacggccgcccac
gccttcctggcagcgcaagcccactacttctcctcctaccatgccttcgtggtcaccact
ggtggcttccactaccccggcgcccaggccgcgctgctgggcctgcaccgtgccctgggc
accctgcgccatgtggtgcgagggcctgaccgccagctgccgcgcatgtggctgcactac
ttccaggactggctgcgggggctccaggttgccttcgaccgggagtgggcgtctgggcgc
atcacccgcgacagctaccgcaacggctcagaggacggtgctctggcatataagctgctc
atccagacgggcaacccgcaacaacccctcgactacgaccagctgacaacacggcgcctg
gtggacgcggatgggctggtgccacccgacaccttctacatcagcctgacggtctgggcc
agcaatgacccgctggggctggcagcctcacaggccaacttctacccgccgccgcctgag
tgggtgcacgacaagtacgacgctactggcgagaatctgcgcatcccggcggcgcagccc
ctggagtttgcacaggtgcccttctacctgagcgggctgcggcacacggccgacttcgtg
gaggccatcgagggcgtgcgggctgtgtgtgaggaagcggcgcggcgccacggtgtgcgc
agctaccccagcggcgaccccttcctcttctgggagcagtacctgggcctgcggcgctgg
ctgctgctggcgctcagcatcgcgctggcctgcaccttcctggtctgtgccctgctgttg
ctcaacccctggacggccggcatcattgtgctggtgctggccatgatgacagtggagctc
tttgggctgatggggctgatgggcatcaagctgagcgccgtgcccgtcgtcatccttatc
gcctctgtgggcatcggcgttgagttcaccgtccatgttgcactgggcttcctgacggct
gtgggtagtcgggaccggcgctcggcgctggcgctagagcacgtcttcgcacccgtgctg
gacggcggcatctccaccctgctcggcgtcctcatgctcgccagctctgagttcgacttc
atcatgaggtacttcttctccgtgctgtctgtcctcaccgtgctgggactcctcaacggg
ctggtgctgctgcccgtcctgctctcggtcattgggccccctgccgaggtccctccagtg
gataacagcagccgcctgccgtcgccggagcccctcccgccgcccattgcccaccacggc
ttctatgtggggcgcccgtcagcctggcacagccctgacgcggcccccgaggcccccccg
gccgcagggcctggcaacgaggactcccctggcagcgcccaggcctgcatcctgctccag
gccggcaaggacccccgctttccctgcatcaccgtggtgaaagccttcgaggtggggcca
gagcccctgggacaggagcccacggccggagaccgcccgccccgtgcccaccccacagcc
ccaccacccacctacgccacggtgacagccacggcctcagtgacgttggcactgcacccc
agcctgcctggtgctgcccgcggctatgcccatgctgccttcgaggacagtgagtccgac
agccacgaggacccgcctggcgctcagcacacccgccatgggtgccacgccactgccacg
tcccgctag
DBGET
integrated database retrieval system
