Crocodylus porosus (Australian saltwater crocodile): 109307031
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Entry
109307031 CDS
T07440
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109307031 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109307031 (PRPF38B)
Spliceosome [BR:
cpoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109307031 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
109307031
NCBI-ProteinID:
XP_019386207
Ensembl:
ENSCPRG00005017699
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKAIDQQIKS
RPRKIKKDGKEGMEEIDRHTERRRSRSPRRSLSPRRSPRRSRSRSRHRESHGSSSFDREL
ERERERQRLEREAKEREKERRRSRSADRPIERRRSRSRERHRSRSRSRDRKGDRRDRDRE
REKENERSRKKDRDYDKEKGTERDKERDRSRERSKERRSKGEVEEKRHKDDKDEKKHRED
KRDSKKERKHRSRSRSKNTGKHSRSRSKEKSSKHKNESKEKSNKRSRSGSRGRTDSVEKS
RKRDHSPSKERSRKRSRSKERSHKHDHSDSKDHSDKHDRRRSQSTERESQEKQPKNKDET
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaccccatgatcctcaccaacatcctctcctcgccctacttcaaggtgcag
ctctacgagctcaagacctaccacgaggtggtcgacgagatctacttcaaggttactcat
gttgaaccatgggagaaagggagcagaaaaacagcaggccagacagggatgtgcggaggg
gtacgaggtgttggaactggaggaatagtgtctacagccttttgcctgctctacaaatta
tttactctgaaacttacccgtaagcaagtgatgggccttataactcacacagactctccg
tacattagggctcttggatttatgtatatcaggtacacacagccacctacagatttatgg
gactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtgggggt
tgcgttatgaccattggggagatgctacgttcctttcttactaagcttgaatggttttcc
acgttgtttccaagaattcctgtgccagtccagaaagccattgatcaacagattaaaagc
agacctagaaaaatcaagaaggatggcaaagaaggaatggaagaaatagatcgacacaca
gaacgtagacgttcaaggtctccgagaaggtctctgagccccagaaggtcccccagaaga
tccagaagcagaagtcgtcatcgtgaaagccacggatcatctagttttgatagagagtta
gaaagagagagagaacggcagagactagaacgggaagccaaagagagggagaaagaaaga
cgcagatctcgaagtgctgatcgtccaatagaaaggaggcgaagcagaagcagggagagg
cacagaagccgtagtcgaagccgtgatagaaagggagatagaagagacagggacagagag
cgggagaaagagaatgaacgaagcaggaagaaagatcgagactatgataaggaaaagggt
accgagagggacaaggagagagatcgatctcgagaacggtcaaaagaaaggaggagtaag
ggtgaagtagaagagaaaaggcacaaggatgacaaagatgaaaaaaagcacagggaagac
aagagagattccaaaaaagagagaaagcatagaagtaggagtagaagtaagaatacaggt
aagcacagtagaagcaggagcaaagagaaatcaagcaaacataaaaatgaaagtaaagag
aaatcaaataaacgaagtagaagtggaagcagaggaagaacagatagtgttgaaaaatcc
agaaaacgagaccacagtcccagcaaagagagatcccgaaagcgtagtaggagcaaagaa
cgatcccataaacacgaccacagtgatagcaaggaccattcagataaacatgatcgtcga
aggagccaaagtacagaacgagagagccaagaaaagcaacctaaaaacaaagatgagact
gtgtga
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