Crocodylus porosus (Australian saltwater crocodile): 109307227
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Entry
109307227 CDS
T07440
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109307227 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109307227 (TPR)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109307227 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
Imm70
Motif
Other DBs
NCBI-GeneID:
109307227
NCBI-ProteinID:
XP_019386545
Ensembl:
ENSCPRG00005014136
LinkDB
All DBs
Position
Unknown
AA seq
2369 aa
AA seq
DB search
MAAVLQQVLERAELAKLPKLVQGKLERFLADQQSEIDGLRASHERFRVDSEQQYFEVEKR
LAQSQERLVNQTQECQTLRQELNKLNEQLKSLSEKNKELEAAQDRSAAVQSKLTREKEEL
EAEKRDLVRTSERRSQEVEHLNEDVKRLNDKLMEANAEKVKLQLKLDELETSDVSVKYRE
KRFEQEKELLQNQNNWLNAELKAKTDELLHIAREKGNEILELKCSLENKKEEVSRMEEQV
SGLKQTNENLQKHVEDLLNKLKEAKDQQSGMEGRFHNELNAHIKLSNLYKSAADDSEAKS
DELTRAVEELHKLLKEAGEANKTTQDHLAEVEESKAAMEKELREKISKLEKELVNANELL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEYERSQKAVASLSAKLEQAMKEIQRLQGDTDKANKHAS
VLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVITQHLVSY
RNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLEEALNELEKLREARHLQ
VQLVDSIVRQRDMYRILLAQTTGVVIPVQVSGMLPEEISFASTPKRSIMPQAMSTPAPVS
MTESIEAAEAKAALKQLQEIFENYKKEKAENDKLLNEQNEKLQEQVSDLRSQNAKMSTQL
EFASKRYEMLQDNVESYRREITSLHERTQKLTATTQKHEQIINTMTQDLRGANEKLAVAE
VRAENLKKERDILKMSEVRLTQQRESYLAEQRGQNLLLTNLRAIQAILERSETETKQRLS
NQIEKLEREISQLKKKLESEVEQRHALTKNQDVHLLDLKRQLETETSRHLNTKELLKNAQ
KEISTLKQQLNNTEALLASQSSQRAPGKGQTSTNEDVDDLVSQLRQAEEQVNDLKERLKT
TSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEVRLKDSSEYQAQLEKKLMEAEKEKQE
LQDEKRKAVESMEQQLSELKKSLTAVQSEVQEALQRASTALNNEQQARRDCQEQAKIASQ
AQNKYERELMLHAADVEALQAAKEQVSKNAAVRQQLEEAAQKAESALLECKASWEERERM
LKDEVSKLVSRSEDLEKQNRLLHEQLETLSDKMVTSVKEANPSALNVSLNEEGKSQEQIM
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLEKELQELQDSLNAEREKVQVTARTIA
QHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDVEEYRKLLSEKEANTKRIQQMSEETGR
LKAEIARANASLTTSQNLVQTLRDELTKIRTEKDNLQKELDVKVADIQEKVKTITQVKKI
GRRYKTQYEELKAKHDKVVAETSAQLSAEQQQEQQASVQEVQELKESLSQADVKTKSLES
QIECLQKTIAEKESEARSLQEQISQVQLELTRLHQDLQERTTQEEQLKQQITEKEEKTKK
TLLAAKQKIAQLAGTKEQLTKENDEWKQKNIALEEQKTELEVRMSALKSQYEGRICRLER
ELREQQERHHEQRDEPPESTNKVSEQQRQITLKSTPASGERGIASTSDPPTANIKPTPVV
STPSKVTAAAIPGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPV
EHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSP
TIVEVVQSSQIERPSTSTAVFGTVSATPSSSLPKRPREEEEDSTVENSEQISEETVDVPL
PKKLRGIQRVEPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTRGEYTPMEDSEETSQS
IPIDIGPLQPDQQNTSSSQECQSKRDDVIVIDSDDEEDDDEENEGEQEDYEDEEEDDEDD
DEDPGMGDEGDDSNEGTGSADGNDGYEADEAEGADGTDPGTETEESMGAGESNQRAADSQ
NSGEGSTSAAESTFSHESSREQQPTSASERQAPRPPQSPRRPSHTLPPRLTIHAPPQELG
PPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHS
PQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTP
LQVAAPVTVFTESTAADASEHASQSVPMVTTSTGNLSTTTESGAGDDGDEVFAEAESEGI
TSEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSHQPKPFRRVRLQPPTLRT
GVRGRHFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgctgcagcaggtcttggagcgggccgagctggccaagctccccaagctg
gtgcaggggaagctggagcgcttcctggccgaccagcagagcgagatcgacgggctgcgg
gctagccatgagcgcttccgcgtggatagcgaacaacaatactttgaagttgaaaaacgt
ctggctcagagtcaggaaagacttgtaaatcagacacaagaatgtcagaccctccgtcag
gagttaaataaactaaatgaacagttgaagtccctgagtgagaaaaacaaagaactagaa
gctgctcaggatcgcagtgcagctgtccagagtaagcttaccagagaaaaagaagaattg
gaagctgaaaaaagagatttagttcgaacgagtgagagacgatctcaagaagttgaacat
ttaaatgaggatgttaaacgtttaaatgacaaactcatggaagcaaatgcagaaaaagtt
aaacttcagttaaagctagatgaacttgaaacatcagatgtctctgtgaagtaccgtgag
aaaaggttcgagcaagaaaaagaattgttgcagaatcagaacaattggctaaatgcagag
ttgaaggctaaaacagatgaactcttgcatattgccagggaaaagggaaatgaaatcttg
gagctgaaatgtagcctggagaacaaaaaagaggaggtttctagaatggaggaacaagta
agtggtttaaaacaaacaaatgaaaatctacagaaacatgtggaagatcttttgaataag
ctaaaggaggcaaaagaccagcaatctggtatggagggaagattccataatgagctaaat
gcccacataaaattatctaacttgtataagagtgccgcagatgattcggaagcaaagagt
gatgagttgacgcgagcagtggaggaactacataaacttttgaaagaagcaggtgaagct
aacaagaccacacaggatcatttggctgaggtggaggagtcaaaagctgcaatggaaaaa
gaactgagggagaagattagtaagttagagaaagaactggtgaatgcaaatgaattactt
tctgctacaaaacgtaagggagccatactctctgaggaggaactggcagccatgtctcct
actgctgcagcagttgctaaagtagtaaaaccaggaatgaaattgactgagttgtacaat
gcatatgtagaaacacaggatcagttacttctggagaaactggagaataagagaattaat
aaatacttggatgaaatagttcaggaagttgaagctaaagcaccgattttaaaacgtcag
cgtgaagagtacgaacgctcgcaaaaagctgtagccagtctgtctgcaaagcttgaacaa
gctatgaaggaaattcagcgattgcagggggacactgataaagccaataagcatgcctct
gtccttgaaagagagaatcaaaggctagaaatacaagtgaaagacctttcacagcagatt
agagtgcttttgatggaacttgaggaagccagaggcaatcatgtgattcgtgatgaagaa
gtgagctctgctgatatcagtagctcctcagaagtgataacccagcatctagtctcttac
agaaatattgaagaacttcagcagcagaatcaacgtctcctggtggctcttcgggaattg
ggggaagctagagaaaaagaagaacaggaaacaacttcatctaaaatttctgagctgcag
agtcaacttgaggaagctctcaatgagctagagaagttgcgcgaagcacgtcatcttcaa
gtgcagctagttgattctattgttcgtcagcgtgatatgtatcgtatattgttggcacag
accacaggagttgtcattccagtgcaagtttcaggtatgttaccagaagagatatccttt
gcatccaccccaaaacgttcaataatgcctcaggccatgtcaactcctgctccagtatca
atgactgagtccatagaggcagcggaagctaaagctgcacttaaacagttgcaggaaatt
tttgagaactacaaaaaagaaaaggcagaaaatgacaaattgttaaatgaacagaatgaa
aaacttcaggaacaagtctcagacttgcgatcacagaatgctaagatgtctacacaactt
gaatttgcttccaaacgttatgagatgctgcaggataatgttgaaagttatcgtcgagaa
ataacatctctacatgaaagaacccaaaagcttacggcaacaactcagaaacatgagcaa
ataattaataccatgacacaggacttaagaggagctaatgaaaaacttgcagttgcagag
gtaagagcagaaaacttgaaaaaagagagagatattttaaagatgtctgaagttcgccta
actcagcaacgagaatcttatttagccgaacaaaggggacagaatttgctactaactaat
ctacgagctattcaggcaatattggagcgatctgagacggagactaaacaaaggctcagt
aatcaaatagagaaactagaacgtgagatatcccagttaaagaaaaaactggaaagtgag
gtggaacaaaggcatgcacttaccaaaaatcaagatgttcatctgctggatcttaaaaga
cagcttgagactgaaacaagccgtcaccttaacacaaaggagcttttgaaaaatgcccag
aaagagatttccacactgaaacagcagctcaataatactgaagccctgctagcctcccag
tcatcacagagagctcctgggaaagggcagactagtaccaatgaggatgtggatgatctt
gtaagtcagctaaggcaagctgaggaacaagttaatgatctgaaagaaagattgaagact
acttctagtaatgtggaacagtacagagctatggtacttagtcttgaagaatcccttaat
aaagagaaacaggtgacagaagaagttcgtgcaactgttgaagtccgtctaaaggactcc
tctgagtatcaggcccagctggaaaagaagctgatggaggcagagaaggaaaaacaagaa
cttcaagatgagaaacgtaaagctgtagaaagcatggagcaacagctgtctgaactgaag
aagagcctcactgctgtgcaatctgaagtccaggaagctcttcagagggccagtacagcc
ttaaataatgaacagcaagccagacgagactgtcaggaacaagcaaagatagcttcacaa
gctcaaaataaatatgagagggaattaatgcttcatgcagctgacgttgaagcgctacag
gctgctaaagagcaagtctctaagaatgcagctgtaaggcaacaattagaggaagctgct
cagaaagctgaatctgcattgctggagtgcaaagcttcatgggaagagcgggaaagaatg
ttaaaggatgaagtgtcaaaacttgtctctcgcagtgaagacttagaaaaacaaaataga
ttattacatgaacaactggagactctgagtgataagatggtgacatcagtgaaggaagca
aacccaagtgcattgaatgtttctctcaatgaagaaggcaaatcacaggaacaaatcatg
gaaattcttagatttatacgccgggagaaggagattgctgaaactaggtttgaggtggcc
caggtggaaagcttgcgttaccgtcagagggtggaacacctggaaaaggagcttcaagaa
ctgcaagacagtctgaatgctgagagagagaaggtgcaggtaactgcaaggacaatagct
cagcatgaggaactaatgaaaaagactgaaaccatgaatgttttaatagaaacaaacaaa
atgctgcgggaagagaaggagaggcttgaacaagaattacaacaaatgcaagcaaaggta
cgtaaactagaagcagatatcttgcctttacaagaatctaatgctgagctgagtgagaaa
agtggaatgctgcaggcagagaagaaactactggaagaagatgttaaacgttggaaagcc
aggacccagcatttactgagccaacaaaaagacactgatgttgaagaatatcggaagcta
ctttcagagaaggaggcaaataccaaacgcatacagcagatgagtgaagaaacaggaagg
cttaaagcagaaatagcaagagctaatgcatccctgaccacaagccagaatctcgttcag
actctcagggatgagctaactaaaataagaaccgagaaagataatcttcagaaagagcta
gacgtgaaagtggctgacatacaagaaaaagtcaagactataacacaggttaagaaaatt
gggcgcagatacaagactcagtatgaagagctgaaagcaaagcatgacaaggtggttgct
gagacatcggctcagttgtctgcagaacaacaacaagaacagcaggcctctgttcaggaa
gtacaggagttgaaagaatctcttagccaggctgatgtgaagacaaaatccttggaaagt
cagatagaatgtttacaaaagactatagcagagaaggaaagtgaagccaggagtctacag
gaacagatttctcaagtacagctggaacttactcgtcttcatcaagatctgcaagagaga
actactcaggaagaacagctcaagcaacagataactgagaaggaggagaagactaagaag
actctgctggctgccaagcagaaaatagcacagttggctggtacaaaagaacagctaaca
aaagaaaatgatgagtggaaacaaaagaacattgcattagaagagcagaagaccgaactg
gaggtgcggatgagtgctctcaaatcacagtatgaaggtcgtatatgtcggctggagaga
gagctaagagagcaacaagagagacaccatgaacagagagatgaaccaccggagtccact
aataaggtttcagaacagcagcggcagatcacactcaaatctacaccagcttcaggtgaa
agaggaattgctagcacttcagatcctccaacagcaaacattaagccgactcctgttgtg
tcaactccaagtaaagtaactgctgctgcaatacctgggaataagtctactccacgagct
agtattcgtccgatggttactcctgctactgtaactaatccaactactactccaacagct
acagttatgcctacaacacaggtggaaacccaagaagctatgcagtcagaaggacctgtg
gaacatgttccagtctttggaagtactagcgggtctgtacgttctactagtcctaacgtc
cagacatctctctcccaacccatcttaactgtacagcaacagactcaagctacagctttt
gtgcagccgactcagcagagtcatcctcagattgagccagccaatcaagaaccatccccc
accattgtggaagttgtacagagctcacagattgaaaggccctccacttctacagcagtg
ttcggtacagtttcagctaccccaagttcttcattacccaagcgtccacgagaggaagaa
gaggacagcacagtagaaaactctgaacaaatttcagaagagacagtggatgttcctctt
ccgaagaaactgaggggtatacaaagagtggaacctgaggaggaagtgacagcagaggag
agtactgatggtgaggtagaaactcaaacatacaaccaagattcccaagattccattgga
gaaggggtgactcggggggaatacactcccatggaagacagtgaagaaacttctcagtct
atcccaatagatattggacctcttcaaccagatcagcagaatacctcgtcatcccaagag
tgtcagtccaagcgagatgatgtcatagtgattgacagtgatgatgaagaggatgatgat
gaagaaaatgaaggcgaacaagaagattatgaggatgaagaagaggatgacgaagatgac
gatgaagacccaggcatgggagatgaaggtgatgatagtaatgaaggaacaggaagtgct
gatggtaatgatggctatgaagctgatgaggctgagggtgctgatggtacagatcccgga
actgaaactgaagagagtatgggagcaggtgaaagcaaccagagagcagcagactcgcaa
aacagtggagaagggagtacaagtgctgcagagtccactttctcccatgaaagttcaaga
gaacagcaaccaacatctgcctctgagaggcaggcccctcgaccaccacagtcaccacgc
agaccttcacacacgttacctccacgcttaactattcatgctccaccccaagagctagga
cctccagtacagagaatccagatgactaggagacagtctgtgggacgtggactacaactg
actcctggcatagggggtatgcagcaacacttctttgatgatgaggataggacagtccca
agtactccaacacttgtggtaccacatcgtacagatggatttgcagaagctattcattcc
ccccaggttgctggagttcctagatttaggtttgggcccccagaagatatgccacagacc
agctctagccactcagatcttggtcagcttgcatcacaaggaggtttaggaatgtatgaa
acaccactcttccttgcccatgaagaagaatctggtggccgcagcgtcccaacaactcct
ttgcaggtagcagcaccagtgactgtttttacagaaagcacagcagctgatgcttcagag
cacgcttctcagtctgttccaatggttacaacgtccactggaaatttatccactactaca
gagtctggagcaggcgatgatggagatgaagtttttgcagaggcagaatctgaaggaatt
acttcagaagctggtctagaaattgatagccagcaagaggaggaatctgttcaagcatct
gatgagtcagatcttccttccactagtcaggatcctccttccagctcatcagcagacaca
agcagtcatcagcccaagccatttcgccgtgtccggcttcagccaccaacattaagaact
ggtgttcgtggtcgtcattttaacagacaacggggtgtgactcatgcaatgggaggccga
ggaggccttaacagaggcaatatcagttaa
DBGET
integrated database retrieval system
