Crocodylus porosus (Australian saltwater crocodile): 109307275
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Entry
109307275 CDS
T07440
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109307275 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpoo02000
]
109307275 (ABCA4)
Transporters [BR:
cpoo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109307275 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
Pep1_7
Motif
Other DBs
NCBI-GeneID:
109307275
NCBI-ProteinID:
XP_019386627
Ensembl:
ENSCPRG00005015301
LinkDB
All DBs
Position
Unknown
AA seq
2330 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLSLFLSLVWLRNANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFQRPTPGESPGVVSNYKNSILARVYQDVQEVLLEAPETH
DLGRMWEQLRTMTQFMETIRTNPERIAGRGLRIRDILKDGETLTSYLLDVVGLSDFVVFQ
LMNSQVRPEQFAYGVPDLALEDIACSRMLLDRFIIFSSRKGLPAVHRAMCALSQGSLQRI
ENVLYANVDFFKLFRLLPTVLDSNSAGVDLQYWRIVLSDVFQALRELARRSSIQDLLEVM
QPFFQDGEPASLDHLMNSLSDLFCGYPEGGGTRVFSFNWYEDNNYKAFLGIESTKKESIH
FYDNTTTPFCNALIQHMESNPLTRIAWSVAKPLLMGKILFAPDSPAVRQILKNANSTFEE
LGRLRLLTKAWEEVGPQLWHFFQDSQQLNMIRDTLKHPTVRDFLNTQLDNEGLTAEYVIN
FLHNGSPESREEGMADFDWRNIFNATDQALRLLHQFLECLTLDKFEGHADETQLTHRALH
LLEENRFWAGVVFPDMHHMTSKVPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVED
LRYIWGGFAYLQDMIDHGIIKTQTNTEVPTGIYLQQMPYPCFVDDVFMITLNRSFPIFMV
LAWIYSVSMIVKSIVLEKEMRLKEALKNRGVTNGVIWYTWFLDSFIMMALSTFLLTALIA
HGQVLHYTDPLILFLFLLTFSAATIMQCFLLSTFFSKANLAAACSGVIYFTLYLPHIVCF
NWQDRLTVHLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWDNIKTSPLEGDKYSFDWSI
RMMLFDAFLYGIFAWYLDNVFPGDYGIPRPWYFPLQESYWFGSEFPKAKKTAAGDDNSPE
EDGADKVKEEEKSKIMTQKDIKQEETSGNQGEKDSKEKKCKHKRKKDPDEQEKPKAKAQD
TAITMNPFFEPEPSDLVPGVCIQNLVKIFGNSTKPAVDGITVTFYEGQITAFLGHNGAGK
TTTLSVLTGLFPPTSGTVLVGGEDIQMHMDSIRQKIGMCPQYNILFNHLTVAEHILFYAQ
LKGRSKKEAELELEMMLEEIGLPHKRNEEAQNLSGGLQRKLSVAIAFVGEAKVVVLDEPT
SGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRIAIISQGKLYCSGSPIFLKN
IFGTGFYLTLVRKMKNIRCKERKDVTHCSCDSHCSCPCSNCASSHKEGAPEQELDGDLNQ
LTTLIHHHIPEAKLIENIGQELIYLLPSKDFKQSSYASLFRELEETLDDLGLSSFGISDT
PLEEVFLKVTAGADPATQNTGSGQENGSAPTRISTEKNEKAEQTPSAVNSTSQTPIGLAE
DDSEGKASYQYKGFQLIHQQIKALLIKRFCHATRSQKDFLAQIVLPSSFVLLALILTLIV
PPFGEYPSLTLHPGIYGHQFVFFSNERPGSEQMVSLTDAFLNKPGFGNRCMKEQPLPNYP
CSNMSTAWNVPTVSSNVTNVFWVHTWSPDNPTPSCKCSTHKKLTMLPECPPGAGGFPPPQ
RVQWSTEILQDLTYRNITDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGKLPVLHVTG
VQIADFLRDLGLMLNVKGGHASMAASNEMSDFLKYMETEENVKVWFNNKGWHAMVIFLNI
ANNGVLRANLQKGQSPEEYGITVINHPLNLTKEQLSEVTILTTSVDAAVAICVIFAMSFI
PASFVLYLIQERVTKAKHLQFVSGVTAAVYWLTNFFWDIVNYVVSAVMVVGIFIGFKKKA
YTSPSNLPVLIALLLLYGWAVIPMMYPAAYLFSVPSTAYVALSCINLFIGINSSAITFVL
ELFENNPSLLKFNNKLKNLLLIFPHFCLGRGLIDLAMNQAVTDVYARFGEERVSNPFQWD
FIGKNLFAMAVEGIVYFAFNLFMQHRFFHTRWFYYPVTTPINDEDEDVAEERQRILKGGS
KTDILTLKELTKLYTTGQRPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTDVTT
GDAVVAGNSILTNISDVHQSMGYCPQFDAIDDLLTGREHLRLYACLRGVPGKEIERVAEW
GIQKLGLHMYADQLAGTYSGGNKRKLSTAIALIGCPPLILLDEPTTGMDPQSRRLLWNAI
VSVIKEGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQHLKYKFGDGYIVTLKIKA
PKPGVPPDPTSAEHFIHANFPGSLQKEKHYNMLQYQICSSSLAKIFRLLLSNKESLSIEE
YSVSQTTLDQVFVNFAKQQMEDETIPLHPRAAGARREVKVYPDTPAQTSA
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttcagacaggtcagacttctgctatggaagaactggatactcagaaaaagg
caaaagcttcgttttctggtggagcttgtatggcctctgtcattatttctttcccttgtc
tggctgaggaatgctaacccactctaccgccaacatgaatgtcattttccaaataaagca
atgccatctgcaggaacactgccatggttacatggcatcttctgtaacatgaacaatcct
tgcttccaaagacccactcctggagagtcccctggcgttgtgtctaactacaaaaattcc
atattagcaagagtatatcaggatgttcaagaggtcttactggaagctcctgaaacccat
gacttaggccgaatgtgggagcagctgcgcacgatgacccaatttatggaaaccataagg
accaatcctgaaagaattgcaggaagaggactgcggatccgagacatcttgaaagacggg
gagactctaacctcctacctactggatgttgttggcctctcagactttgtggttttccag
cttatgaattctcaagtacgccctgaacagtttgcctacggagtccccgacttggctctg
gaggacattgcctgcagcaggatgctacttgaccgcttcattatcttcagcagccgaaaa
ggtctgcctgctgtgcacagagcaatgtgtgccctctcccaggggagcctccaaagaata
gaaaatgtcttgtatgcaaatgttgatttcttcaagcttttccggctgcttcccactgtt
ttagacagtaactcagcaggtgttgacctgcagtactggaggatagtgctctctgatgtg
tttcaagcactgcgagagctagccaggagatcaagcatacaggaccttctggaggttatg
cagccatttttccaagacggagagccagcatccttagaccatctgatgaactccttgtct
gatcttttctgtggctacccagagggaggtggtaccagagtgttctccttcaactggtat
gaagataataactacaaggcttttcttgggattgaatccaccaagaaggaatccattcat
ttttatgacaacacaaccacacctttttgtaatgcactgatccagcacatggaatcaaac
cctttgaccagaatagcctggagtgttgcaaagcccctgctgatgggaaaaatcctcttt
gctcctgattctcctgctgtaaggcaaatactgaaaaatgcaaactccacctttgaggaa
cttgggcgcctcagactgttgaccaaagcctgggaagaagtgggacctcagctgtggcat
ttttttcaagacagccagcagctaaacatgatccgagacacgttgaagcaccccacagtg
agagacttcttgaacacacaactggataatgaaggtttaaccgctgaatatgtgatcaac
tttctccataatggctccccagagagccgagaggaaggcatggcagactttgattggcgg
aatatcttcaatgccacagaccaggccttgcgtttgttgcatcagtttcttgagtgcttg
accctggataaatttgaaggtcatgctgatgaaacccaactgacacatcgtgcccttcac
ctgctggaggaaaacagattctgggctggagttgtctttcctgacatgcatcacatgacc
agcaaggtgccacctcatgtgaaatacaagatccggatggacatagatgcagtggagaaa
acaaataaaatcaaagacaggtactgggatcctggtccaagagctgacccagtggaggat
ttacgttacatctggggagggtttgcatatctgcaagacatgattgatcatgggatcata
aagactcagaccaacactgaagtgccaacaggaatctacctgcagcaaatgccctatccc
tgctttgtagatgatgtctttatgatcaccctgaaccgctccttccccatcttcatggtg
ctggcttggatctattcagtttccatgatcgtgaagagcattgttctggagaaagaaatg
agactgaaagaggccttgaagaacaggggagtcactaatggggtgatctggtacacctgg
tttctagacagcttcatcatgatggctctgagtacatttctcctaacggcattaattgcg
catggccaggttcttcattataccgatcccctcatcctttttctgtttctgctgacattc
agtgcagccaccatcatgcagtgtttcttgctcagcaccttcttctccaaagccaatctg
gcagctgcctgcagtggagtcatctacttcaccctctacctgccccacattgtctgcttc
aactggcaggatcgtttgactgttcatctgaagattctggcaagtttgctttctcaagtg
gcttttgggtttggtacagagtacttatcacgctatgaagagcaaggtcttgggctgcag
tgggacaacattaaaactagtcctttggaaggagacaagtacagttttgattggtccata
aggatgatgctttttgatgcttttctatatggaatatttgcctggtacctcgataatgtt
tttccaggagactatggaataccccgaccttggtatttccctctgcaggagtcttattgg
tttgggtctgaattcccaaaagctaagaaaacagcagctggtgatgacaacagtccagaa
gaagatggtgcagacaaggtcaaagaagaggaaaagagcaaaatcatgacacagaaagac
atcaagcaggaggaaacgagtggcaaccagggggagaaggacagcaaagaaaaaaaatgt
aaacataaaaggaaaaaagatcctgatgagcaagagaaacctaaagcaaaggcacaggac
acagctataaccatgaaccccttttttgaacctgaaccttcagacttggtcccaggagtg
tgcatacagaacttggtgaagatatttggaaacagcacaaagccagcagtggatggaata
accgttactttttatgagggccagatcacagcctttcttggccacaatggagcaggaaag
acaaccaccctgtcagtcctgacaggcttgttcccacccacatctggaactgtcctggtt
ggcggtgaggatatccaaatgcacatggactctattcgacagaaaataggcatgtgccct
cagtacaacattttattcaatcaccttactgtagcagagcacatcttgttttacgcccaa
ctgaaagggagatccaaaaaagaagccgagctggagctggagatgatgctggaagagata
ggtctcccccataaaaggaatgaagaggctcaaaacctgtcaggtggcttgcagagaaag
ctatctgttgccattgccttcgtcggtgaggcaaaggtggttgtcttggatgagcccacc
tctggagttgatccatattccaggaggtctatctgggatcttctactgaagtatcgttca
ggcagaaccattattctctcaacccatcatatggacgaggctgacatcctcggagaccgg
attgccatcatatcccaagggaaactgtactgctcaggctctcccatcttcctgaagaac
atctttggaactggcttctatcttaccttggtccgcaagatgaaaaatatccgatgtaaa
gaacgaaaagatgtgacccactgcagctgtgactctcattgttcctgcccctgctccaac
tgtgcatcttcacacaaggagggagctcctgaacaagaactggatggggatctgaatcag
ctaacaaccctaattcatcatcatattcctgaagcaaaattaattgaaaacattggtcag
gaactcatctaccttttgcccagtaaagattttaaacaaagctcttacgccagcctcttc
agagaattggaggaaactctggatgacctaggactcagcagttttgggatttcagacaca
ccacttgaagaggtgtttctgaaggtcactgcaggggctgaccccgcaacacagaacaca
ggaagtggtcaagaaaatggctctgctcccacaagaatctccactgagaaaaatgagaag
gctgaacaaaccccctcagcagtgaacagcacctctcaaactcccataggcctggcagaa
gatgacagtgaaggcaaagcttcctatcagtataaaggtttccagcttatccaccagcaa
atcaaggcactgcttatcaaacggttctgccatgctacccggagccaaaaggacttcctt
gctcagattgttctcccttctagttttgtgttgctggctttaatacttacactcattgtc
cctccatttggagaatatcccagtttaacactgcaccctgggatctatggacaccagttt
gttttcttcagcaatgagcgccctggcagtgagcagatggtttccctcactgatgccttc
ttgaataaaccaggatttggcaatcgctgcatgaaagaacagcctcttccgaactacccg
tgcagtaatatgtcaactgcctggaacgtaccaactgtttcttctaatgtaaccaacgtg
ttttgggtccatacatggagccctgataatcctacaccctcctgcaagtgcagcacccac
aagaaactcactatgcttcctgaatgccctccaggagctggaggctttcctcctcctcag
cgagtacagtggagcacagaaattcttcaagatctcacctacagaaacatcacagatttc
ctggtgaaaacctatcccacacttataaaagggagtttgaagagcaaatattgggtcaat
gaacaaaggtatggaggaatttccattggaggaaaactccctgttcttcatgtcactgga
gttcagattgctgattttttgagagatcttggcttaatgctcaatgtgaaagggggccac
gcttcaatggctgcttctaacgaaatgtctgatttccttaagtacatggaaacagaagaa
aatgttaaggtgtggtttaataacaaaggctggcatgccatggtcatcttcctcaacata
gccaacaatggggtcctgagagccaatctacagaaaggccaatcccctgaggaatatggg
atcactgttataaatcatcctctgaacctcaccaaggagcagctctctgaagtcaccata
ctgaccacatcagtggatgccgctgtcgccatctgtgtgatttttgccatgtcctttatc
ccagccagttttgttctgtatctgattcaagaacgggtgacaaaagccaagcaccttcag
tttgtcagtggtgtgactgctgctgtttactggttaaccaacttcttttgggacatagtg
aactatgttgtgagtgccgttatggttgtgggtatattcattggcttcaagaagaaagca
tacacttctccaagcaatctccctgtgcttatagcattgctgcttctgtatggatgggca
gtaattcccatgatgtacccagcagcctaccttttcagtgtccctagcacagcatatgtt
gcattgtcctgtattaatctcttcattgggatcaacagcagtgccattacatttgtcctg
gagctgtttgaaaataacccgtctttgctgaaattcaataacaaattgaaaaacttgctg
ctgatcttcccacatttttgcctgggaaggggacttattgacctagccatgaaccaagca
gtgactgacgtatacgccaggtttggtgaggagcgtgtctcgaatccattccagtgggac
tttattggaaagaatttgtttgccatggcagtggaagggattgtatactttgctttcaac
ctcttcatgcagcatcgttttttccacacaagatggttttattatcctgtcacaacaccc
attaatgatgaagatgaggatgttgcagaggaaagacaaagaattttgaaaggaggaagc
aaaacagatatcttaacattaaaagaactgacaaagctttatacaactggacaaagacca
gcagtagacagactctgcgtgggcattcgtcctggagagtgctttggccttctgggagtg
aatggtgctggcaagacgacaactttcaaaatgctgactggggacactgatgtgacaact
ggagatgctgtggtggctggcaacagtatattgaccaacatctctgacgtccatcaaagc
atgggctactgccctcagtttgatgctattgatgacctgctcacaggtcgggaacatctc
cgtctctatgcatgcctgcgaggagtcccaggaaaggaaatcgagagggttgctgagtgg
ggtattcagaagctgggtctccacatgtatgctgaccagctggcaggcacatacagtggt
ggcaacaaacgcaaactttccactgccatcgcactgataggctgccctcctctcatccta
ctagatgaaccaactacaggaatggatcctcagtcccgacgcctcctatggaacgccatt
gtcagtgtgatcaaagaagggcgagctgtggttctgacgtcacacagcatggaagaatgt
gaagctctctgtactcgtctagccataatggtgaaggggaccttcaaatgcttgggcact
attcaacatctaaaatacaaatttggagatggctatattgtcacattgaaaatcaaagcc
ccgaagcctggagtgcctccagatcccacctcagccgagcacttcatacatgcaaacttc
cctgggagtttacagaaagagaaacactacaacatgctgcagtaccagatatgctcctcc
tcgctggccaagatctttcggttacttctctccaacaaggaaagcctgagtattgaagaa
tattctgtttctcaaacaactttagatcaagtgtttgtgaactttgctaagcaacagatg
gaagatgagacaattcctttacaccctcgtgcagctggagccaggagagaagtgaaggtg
tacccagatactcctgcacagacatctgcatag
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integrated database retrieval system
