KEGG   Crocodylus porosus (Australian saltwater crocodile): 109307718
Entry
109307718         CDS       T07440                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    109307718 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpoo04131]
    109307718 (WDR7)
Membrane trafficking [BR:cpoo04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    109307718 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd CFAP251_N WDR55 Beta-prop_EML EIF3I ASA1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR41 DSE1_N Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_HPS5 PEP5_VPS11_N PAC11 Beta-prop_WDR19_1st WDR72_alpha-sol Beta-prop_SCAP WDR90_beta-prop_4th Tricorn_2nd LRS4 PD40 DNAI3_WD Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 109307718
NCBI-ProteinID: XP_019387295
Ensembl: ENSCPRG00005014111
UniProt: A0A7M4F993
LinkDB
Position
Unknown
AA seq 1458 aa
MAGNSLVLPIVLWGRKAPTHCISTLLLMDDVSMIVTGCHDGQICLWDLSLNLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFT
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIVTSEVSHIQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENGQTWAGGDFVSADKVIIWTEDGQSFIYKLPASCLPASDSFRSDV
GKAVENLIPPLLYSVLDRANKQLLICPPVTRFFYGRRECFHKLLIQGDSSGRLCIWSVPN
TLEQQDIAEGLQMTVSTSLQEAFNKLTPHPAGIIDQLSLIPNSSEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRALRGHRNKITCLLYPHQVSSRY
DQKYLVSGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQGIKTNLTDPDIHILFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFRAGKRAAVLFQQVKETIKENIKEHLLDDDDEDEEAMRQRREDSDPEY
RSSKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNDVLDDICLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPSYNQSMGKPSYDGVELTRKMSITEGLGRGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPELPKVKAPPPPVSSPAAQGQIKQGWSQLAAMHC
VMLPDLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKETIDAWAP
YLPQYIDSVISPGVTAEAIQTGTASPDSSSTEAKVQEEEHDLVDDDITAGCLSSLPQIKK
ISTSYEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLA
RHTCKALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADA
EKQLANITMGLPLNPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQ
NIHTTTLARAKGEILRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPA
ICRFYMVSYYERSHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATY
SNTDSHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALKLARLIWTS
NRNVILMAHDGKEHRFMV
NT seq 4377 nt   +upstreamnt  +downstreamnt
atggcaggaaatagccttgttctacctatagttctttggggtcgcaaagcaccaacgcac
tgcatatcaacccttctgttaatggatgatgtgtcaatgattgtcacaggatgccatgat
ggacagatatgtctctgggacctttcattaaatctggagattaatcccagagctctgttg
tttggtcacacagcttcaattacttgtttgtccaaggcctctgcctccagtgaaaaacag
tatatagtgagtgcatctgaaagcggggagatgtgtctctgggatgtgaatgatgggaga
tgcatagaatttactaaattagcctgcacacacactggcatacagttctatcagtttaca
gttgggacccaacgtgaagggaggctgctatgccatgggcattatccagaaattcttgtt
gtggatgctaccagccttgaggtcctatattctttagtgtcaaagatttctcctgactgg
atcagctctatgagtattattaggtcccacagaacacaagaggatactgttgtggcagtt
tcagtgactggtattctgaaagtatggattgtaacttctgaagttagtcacattcaagat
acagaaccaatatttgaagaggagtctaaaccaatttattgtcagaactgccaaagtatt
tccttctgtgcatttacccagagatctcttttggtagtatgctcaaagtactggagggtg
tttgatgctggagattattctctgttatgttcagttcccagtgagaatggacagacctgg
gctggcggtgactttgtatcggccgataaagtaatcatatggacagaagatggccaaagt
tttatttacaaactaccagccagttgcctaccagctagtgattcatttcgcagtgatgtt
ggcaaagctgttgaaaacttaattcctcctttgctgtacagtgtattggacagagcaaat
aagcagttactaatttgtcctcctgtcactcggttcttctatggacgcagagaatgtttc
cataaacttctaatccaaggagactcttcagggagactgtgtatttggagtgtgccaaat
acacttgagcaacaagacattgctgaagggttgcaaatgacagtttcaacttccttgcaa
gaagcttttaataaactcactcctcatcctgctggaattattgatcaattgagtttaata
ccaaacagcagtgaaccactcaaagttacagctagtgtatatattccagcacatggacgc
ctggtttgtggtcgtgaagatggaagcattattattgtgccagcaacacaaactgctata
gttcagcttcttcaaggagagcacatgctcaggagaggttggccacctcacagagctctc
agaggtcatcgtaacaaaatcacatgtttactgtaccctcatcaggtttcatctcgttat
gaccaaaaatatttggtatcaggtggtgtggatttttcagtcattatatgggacatattt
tctggcgaaatgaaacatattttctgcgtgcatggcggagagataacgcagctcctagtt
ccaccggaaaattgtagtgcaagagtccagcactgcatttgctctgttgccagtgaccac
tcagtaggacttctgagtctgcgagagaaaaaatgcatcatgcttgcttctcgtcatctt
ttccctattcaagtaattaagtggagaccttcagatgattacctggtggtaggatgttca
gatggatctgtatatgtctggcaaatggacactggtgcactggatcgttgtgtgatggga
ataacagcagttgagatcttgaatgcttgtgatgaggcagttcctgctgcagtagactcc
ctcagtcacccagctgtaaacctaaaacaggccatgactagacgtagccttgctgcttta
aaaaatatggcccaccagaaattacagacccttgccactaaccttctggcttctgaagct
tctgacaaagggaatttgcctaaatattcacataactctctgatggttcaaggtataaag
actaacctaacagacccggatatccacatcctcttctttgatgtagaagctctgattatt
cagctactgacagaagaagcgtctaggcctaacactgcacttatttccccagagaattta
cagaaagcatctggcagttccgacaaggggggctcttttcgggctggcaaacgagcggca
gttctcttccagcaggtcaaggaaacaatcaaagagaacataaaagaacatcttctggat
gatgatgatgaggatgaagaagcaatgaggcagagaagagaagacagtgacccagaatat
cgctccagcaaatctaaaccattaaccctattagaatataatcttaccatggacacagca
aaactttttatgtcctgtctccatgcctggggtttgaatgatgttcttgatgacatttgc
cttgatcgccttgggatgcttaagccacactgttctgtgtccttcggtctactatctaga
ggaggccatatgtctctgatgcttcctagctataaccagtccatgggcaagccatcctat
gatggtgtagaattaacaaggaaaatgtctattacagagggactgggaagggggacttat
ggagtatcacgtgcagtcaccacccagcacctcctatctattatctctctggcaaatacc
ttaatgagtatgactaatgcaacttttattggcgatcatatgaagaaaggaccaaccagg
cctccaaggccaggcactccagagctgcctaaagtgaaggctcctccaccccctgtttca
agtcctgcagctcaagggcaaattaaacaaggatggagtcaactagctgctatgcactgt
gtcatgctccctgatctattgggattggataaatttagacctcctcttcttgaaatgctt
gcacgcaggtggcaagatcgatgcttagaggtaagagaagctgcccaggccttattgtta
gcagaactgagaagaattgaacaggcaggacggaaagaaacaattgatgcatgggctcca
tatttgccacaatatattgacagtgttatatcccctggagtgacagcagaagctattcag
actggtactgcaagtccagattcatccagcacagaagccaaagttcaagaagaggagcat
gatctggttgatgatgacatcacagcaggttgtctgtctagcctcccacaaattaaaaag
atatctacatcatatgaagagagacggaagcaagctactgctattgtcttgctaggagta
atcggagcagaatttggagctgaaatagaacctccaaagttactgaccagaccacgcagt
tccagtcagattcctgaagggtttggtttaaccagtggtggatcaaattattccttggcc
aggcatacatgcaaggcattgacatttctgctgctgcagccacccagccccaaacttcct
ccacacagcaccatccgcagaactgcaattgatctgattgggcgaggttttactgtttgg
gagccatacatggacgtctctgctgtattaatgggccttttggagctctgcgctgatgct
gagaaacagcttgctaacatcacaatggggttgcctctgaatccagcagctgactccgcc
cgctctgcacgacatgctctctcgctcattgccactgccagaccacccgccttcataaca
actattgccaaggaggttcacagacacactgccttggcagcaaacactcagtctcaacaa
aatattcacaccacaaccctcgctcgagctaaaggagagatcctgagagtcattgaaatt
cttattgaaaagatgccgacagatgtggtcgatctccttgtagaggttatggacatcatc
atgtattgccttgaaggatccttagtcaagaaaaagggacttcaggaatgctttccagcc
atatgcaggttctacatggtcagctattatgagcgcagtcacagaatagcagtgggagct
cgccatggttcagtagccctctacgacatccggactggaaaatgtcagactatccatggc
cataaaggaccaataaccgctgttgcttttgctcctgatggacggtatcttgccacttat
tccaacacagatagccatatctccttttggcagatgaacacctctctcctgggaagtatt
ggaatgctgaattcggcaccccagctccgctgcattaaaacataccaggtgccccctgtc
cagcctgcctcccccggctcacacaatgcactcaaactggcccggctgatctggacttct
aatcgcaacgttattctcatggctcatgatggcaaagaacatcgatttatggtctag

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