KEGG   Crocodylus porosus (Australian saltwater crocodile): 109307796
Entry
109307796         CDS       T07440                                 
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04137  Mitophagy - animal
cpoo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109307796 (VCP)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    109307796 (VCP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoo03019]
    109307796 (VCP)
   03009 Ribosome biogenesis [BR:cpoo03009]
    109307796 (VCP)
   04131 Membrane trafficking [BR:cpoo04131]
    109307796 (VCP)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpoo04147]
    109307796 (VCP)
Messenger RNA biogenesis [BR:cpoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109307796 (VCP)
Ribosome biogenesis [BR:cpoo03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    109307796 (VCP)
Membrane trafficking [BR:cpoo04131]
 SNARE
  SNARE associated proteins
   Others
    109307796 (VCP)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    109307796 (VCP)
Exosome [BR:cpoo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109307796 (VCP)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_5 AAA_33 AAA_2 AAA_22 TIP49 AAA_14 NPHP3_N RNA_helicase Vps4_C AAA_28 nSTAND3 Parvo_NS1 Mg_chelatase AAA_17 IstB_IS21 ATPase_2 AAA_18 AAA_7 ATPase DUF815 ABC_tran AAA_24 NB-ARC TsaE ResIII Viral_helicase1 NACHT Sigma54_activat SLFN-g3_helicase KAP_NTPase DUF3944 Zot
Other DBs
NCBI-GeneID: 109307796
NCBI-ProteinID: XP_019387431
Ensembl: ENSCPRG00005015313
UniProt: A0A7M4FDC4
LinkDB
Position
Unknown
AA seq 806 aa
MASGSDSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcctcgggatccgattctaaaggagatgacttatcaactgcaattctgaagcagaag
aacagacccaatcggttaattgtcgatgaagccatcaatgaggacaatagcgttgtatca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacactgttttgctaaaa
ggaaagaagaggagagaggcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagatccgcatgaatagggtggttcgcaacaacctccgagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaagtacggcaaacgcatccatgtgctgccaatcgac
gacacagtagaggggatcacaggaaatctgtttgaggtctaccttaagccatacttcctg
gaagcatatagacctatcagaaaaggagacatcttcctggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagaccccagcccttattgcatagtggctccagatacc
gtgatccattgcgaaggggagcccatcaaacgagaggatgaggaggagtcattgaatgaa
gtgggctatgatgacattggaggctgcaggaagcagctagctcagatcaaggagatggta
gagctccctctcagacaccctgctctcttcaaggccattggtgtgaagcctccccgtggg
atactgctgtatggtccccctggcactggtaaaaccctgattgctcgtgcagtggccaat
gaaactggagctttcttcttcctgatcaatggtcctgagattatgagcaagctggctgga
gagtcggagagtaatctgaggaaagcctttgaagaagctgaaaagaatgctcctgccatc
atcttcattgacgaactggatgccattgctccaaagagagagaagacacatggagaggtg
gaacgccgcatagtgtctcagctgctgactctgatggatggcctgaagcagagagcacat
gtgattgttatggcagcaaccaacagacctaacagcattgacccagccctcaggcgattt
ggtcgttttgacagagaggtagatatcggtattcctgatgccacgggacgcctggaaatc
ctgcagattcacacaaagaacatgaagctggctgatgacgtggatttggagcaggtggcc
aacgagacccacggccacgttggtgctgacttggctgctctctgctcagaagctgctctt
caggccatcaggaagaagatggatctcatagacttggaagatgaaaccattgatgctgaa
gtgatgaactccttggctgtcaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagacagtagtcgaagtgccccaagttacctgggaggatattggt
ggcctagaggatgtcaagagagaactccaggagctcgtacagtaccctgtggagcaccca
gacaaattcctcaaattcggcatgactccctccaaaggggtcctgttctatgggccccct
ggctgtggtaagacgctgctggctaaagccattgccaatgaatgccaggcaaacttcatc
tccatcaaggggccggagctgctcaccatgtggtttggtgaatccgaggcaaacgtgcgt
gagatctttgacaaggcccgccaagcagctccctgtgtgctcttcttcgatgagctggac
tccattgcaaaggcccgaggtgggaacattggggatggtggtggcgctgcagaccgtgtc
attaatcagatccttaccgaaatggatggcatgtccaccaagaagaacgtattcatcatt
ggtgccaccaacaggccagacatcatcgatccagccatcctgcgtcctggccgtctggat
cagctcatctacatccccctgcctgatgagaagtcccgggttgctatccttaaagccaac
ctgaggaagtcacctgttgccaaggacgtggatctggagttcctggctaaaatgaccaac
ggtttttccggagctgacctgacggagatctgccagcgtgcctgcaaactggccatccgt
gagtccattgagagtgagatccggcgggagcgtgagaggcagaccaacccctcggctatg
gaagtggaggaggatgaccctgtccccgagatccgcagagaccactttgaggaggccatg
cgcttcgctcgccgctccgtcagcgacaacgacatcaggaaatatgagatgtttgcacag
actctacagcagagccgtggcttcggcagcttcaggttcccatccggtaaccagggaggt
gctggcccaagccaaggcacgggaggtggcagcggcggcaatgtgtacagcgaagacaac
gatgatgacctctacgggtaa

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