Crocodylus porosus (Australian saltwater crocodile): 109307796
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Entry
109307796 CDS
T07440
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04137
Mitophagy - animal
cpoo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109307796 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109307796 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109307796 (VCP)
03009 Ribosome biogenesis [BR:
cpoo03009
]
109307796 (VCP)
04131 Membrane trafficking [BR:
cpoo04131
]
109307796 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109307796 (VCP)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109307796 (VCP)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109307796 (VCP)
Membrane trafficking [BR:
cpoo04131
]
SNARE
SNARE associated proteins
Others
109307796 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109307796 (VCP)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109307796 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
109307796
NCBI-ProteinID:
XP_019387431
Ensembl:
ENSCPRG00005015313
UniProt:
A0A7M4FDC4
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGSDSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaaggagatgacttatcaactgcaattctgaagcagaag
aacagacccaatcggttaattgtcgatgaagccatcaatgaggacaatagcgttgtatca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacactgttttgctaaaa
ggaaagaagaggagagaggcagtctgcattgtcctgtcagatgatacctgctcagatgag
aagatccgcatgaatagggtggttcgcaacaacctccgagtgcgcctgggtgatgtgatc
agcatccagccttgcccagatgtgaagtacggcaaacgcatccatgtgctgccaatcgac
gacacagtagaggggatcacaggaaatctgtttgaggtctaccttaagccatacttcctg
gaagcatatagacctatcagaaaaggagacatcttcctggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagaccccagcccttattgcatagtggctccagatacc
gtgatccattgcgaaggggagcccatcaaacgagaggatgaggaggagtcattgaatgaa
gtgggctatgatgacattggaggctgcaggaagcagctagctcagatcaaggagatggta
gagctccctctcagacaccctgctctcttcaaggccattggtgtgaagcctccccgtggg
atactgctgtatggtccccctggcactggtaaaaccctgattgctcgtgcagtggccaat
gaaactggagctttcttcttcctgatcaatggtcctgagattatgagcaagctggctgga
gagtcggagagtaatctgaggaaagcctttgaagaagctgaaaagaatgctcctgccatc
atcttcattgacgaactggatgccattgctccaaagagagagaagacacatggagaggtg
gaacgccgcatagtgtctcagctgctgactctgatggatggcctgaagcagagagcacat
gtgattgttatggcagcaaccaacagacctaacagcattgacccagccctcaggcgattt
ggtcgttttgacagagaggtagatatcggtattcctgatgccacgggacgcctggaaatc
ctgcagattcacacaaagaacatgaagctggctgatgacgtggatttggagcaggtggcc
aacgagacccacggccacgttggtgctgacttggctgctctctgctcagaagctgctctt
caggccatcaggaagaagatggatctcatagacttggaagatgaaaccattgatgctgaa
gtgatgaactccttggctgtcaccatggatgacttcaggtgggctctgagccagagcaac
ccctcagctctgcgggagacagtagtcgaagtgccccaagttacctgggaggatattggt
ggcctagaggatgtcaagagagaactccaggagctcgtacagtaccctgtggagcaccca
gacaaattcctcaaattcggcatgactccctccaaaggggtcctgttctatgggccccct
ggctgtggtaagacgctgctggctaaagccattgccaatgaatgccaggcaaacttcatc
tccatcaaggggccggagctgctcaccatgtggtttggtgaatccgaggcaaacgtgcgt
gagatctttgacaaggcccgccaagcagctccctgtgtgctcttcttcgatgagctggac
tccattgcaaaggcccgaggtgggaacattggggatggtggtggcgctgcagaccgtgtc
attaatcagatccttaccgaaatggatggcatgtccaccaagaagaacgtattcatcatt
ggtgccaccaacaggccagacatcatcgatccagccatcctgcgtcctggccgtctggat
cagctcatctacatccccctgcctgatgagaagtcccgggttgctatccttaaagccaac
ctgaggaagtcacctgttgccaaggacgtggatctggagttcctggctaaaatgaccaac
ggtttttccggagctgacctgacggagatctgccagcgtgcctgcaaactggccatccgt
gagtccattgagagtgagatccggcgggagcgtgagaggcagaccaacccctcggctatg
gaagtggaggaggatgaccctgtccccgagatccgcagagaccactttgaggaggccatg
cgcttcgctcgccgctccgtcagcgacaacgacatcaggaaatatgagatgtttgcacag
actctacagcagagccgtggcttcggcagcttcaggttcccatccggtaaccagggaggt
gctggcccaagccaaggcacgggaggtggcagcggcggcaatgtgtacagcgaagacaac
gatgatgacctctacgggtaa
DBGET
integrated database retrieval system