Crocodylus porosus (Australian saltwater crocodile): 109308139
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Entry
109308139 CDS
T07440
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109308139 (CHD1)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109308139 (CHD1)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109308139 (CHD1)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109308139 (CHD1)
SLIK complex
109308139 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
109308139
NCBI-ProteinID:
XP_019387961
Ensembl:
ENSCPRG00005005376
UniProt:
A0A7M4EBU8
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MNGHSDEESARNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDASKEKKQVQAKPPKVGGAEFWKSNPSILTVQRSAMLRKQQQQQQQQKAASSDS
GSEEDSSSSDDSVDDSTSETKRKKHKDEDWQMSGSGSVSGTGSDSESREDREKSSCEESE
SDYEPKNKVKSRKPPSRIKPKSGKKSVGQKKRQLDSSDDDDDDDDDDDDYDKRGSRRQAT
VNISYKEAEEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRTGRKGATGAATTIYAV
EADGDPNAGFDKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDL
ETKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLP
YSECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHE
GLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVV
PLSTLTSWQREIQIWASQMNAVVYLGDITSRNMIRTHEWMHLQTKRLKFNILLTTYEILL
KDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL
HFIMPEKFSSWEDFEEEHGKGREVGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRME
MSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDDEFYNKQ
EALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGS
IKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSS
TPFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLS
QFKVANFSNMDEDDIELEPERNSRNWEEIIPEVHRRRIEEEERQKELEEIYMRPRMRNCA
KQISFNGSEGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKS
YKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGQERAGGRLGKV
KGPTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKED
DSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDL
ARKEAQRLSGAGNSKRRKMRTKKNKVLKSAKMKEEVKSDSSLPASEKSDEEEDDYKDEIS
SVKHPNKKIKTEKENEEKPESDIGVKKDTEEKRETKEKENKRDLKREKREKEDKKELKEK
EAKEKRENKIKESTQKEKEVKDEKTNEVKSESKDKTKKTLLADTPVHITASSEPVPISEE
SEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEY
TNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNIGSNVNTHVIR
NPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGK
DHRDWDHYKQDNRYYSDSKHRKLDDHRSRDHRSNLEGNLKDSRSHSDHRSHSDHRIHSDH
RSTADYGHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDH
KSTPEHTWSSRKT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgcaagaaacagcagcggagaatcgagccaatca
gatgatgattctgggtcagcgtcaggttctggatctggttcaagctctggaagcagcagc
gatggaagtagcagccagtcaggtagcagcgactctgactctggttcagagtcaggaagc
cagtcagaatcagagtctgatgcatctaaggagaagaaacaagttcaggctaaaccgcct
aaagttggtggagctgagttttggaaatcgaatccaagtattctaactgttcagagatca
gcaatgctcagaaagcagcagcagcagcaacagcagcaaaaagcagcttcatcagacagt
ggttcagaagaggattcatctagtagtgacgactctgtggatgactcaaccagcgaaacc
aagaggaaaaaacataaagatgaagactggcaaatgtctgggtcaggatcagtctctggg
actggttcagattctgaatcaagggaagatagagaaaaaagcagctgtgaagagagtgaa
tctgactatgagccaaaaaataaagtcaaaagcaggaaacctcccagcagaattaagcca
aaaagtggtaaaaagagtgtaggacagaaaaagaggcagcttgattcatctgatgatgat
gacgacgatgatgatgatgacgatgattatgataaacgaggatctcgtcgccaggcaaca
gtcaacattagttacaaagaagctgaagaagcaaagacagattcagatgacttgctggaa
gtctgtggagaggatgttccacaacctgaagaagatgaatttgaaactatagagaagttt
atggatagtcgcactggacgaaaaggagcaactggtgctgcaactaccatctatgcagtt
gaggcagatggtgatccaaatgcagggtttgacaaatcaaaggagccaggggaaattcag
tatctgattaaatggaaaggctggtcccatatacataacacatgggagactgaagaaacc
ttaaagcaacagaatgtgaaaggaatgaagaaactggacaactataagaaaaaagattta
gaaacaaagcgatggctgaaaaatgcttctccagaagatgtggaatattataactgtcag
caagaacttacagatgatctgcataaacagtatcaaatagttgaaagaataattgctcat
tcaaatcagaagtcagcagcaggttatccagattattactgcaaatggcagggtctccca
tattctgagtgtagctgggaagatggtgctctcattgccaaaaaatttcaggcacgtatt
gatgagtattttagcagaaatcaatccaagaccactccttttaaggactgcaaggtatta
aaacagagaccaaggtttgttgcactaaagaagcagccatcatatattggagggcatgag
ggcttggagttgagagactatcagttaaatggactgaactggcttgctcactcttggtgc
aaggggaacagttgtattcttgcagatgaaatgggcctaggtaaaacaatacagacgatc
tcctttctgaactacctgtttcatgaacatcagttgtatgggcctttcttgctggtagtg
ccactttccactttgacatcttggcaaagagaaattcagatatgggcttctcagatgaat
gctgtggtttatttaggtgatataactagcagaaacatgataagaactcatgaatggatg
catctacagaccaaacggttaaaatttaatatacttttgacaacttatgagattctgcta
aaggataagtcattccttggtggtctaaactgggcatttataggagtggatgaagctcat
cgtttgaaaaatgatgattctcttctgtataaaaccttaatagactttaagtccaaccat
cgtcttcttatcactggaacccctctgcagaactctctcaaagagctttggtctttgctc
cacttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaag
gggagagaagttggctatgcaagtcttcacaaagaacttgagccattcctgttgaggaga
gttaaaaaagatgtagaaaaatctttacctgctaaagttgaacaaattttgaggatggag
atgagtgcattgcagaagcaatattacaagtggattttaaccagaaattataaagccctg
agtaaaggttcaaagggcagtacctcagggtttttgaatatcatgatggaactcaagaag
tgttgtaaccattgctacctcattaaaccaccagatgatgatgaattctataataaacag
gaggccttacagcatttaattcgtagcagcgggaaactcatccttcttgacaagctactg
attcgcctacgggaacgtggcaacagagttcttattttctctcagatggtgcggatgctg
gacatcctagcagaatatttgaagtatcgtcagttcccctttcagagactagatggatca
ataaaaggggaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggat
ttctgcttcttactgtctactagagctggaggtctaggtatcaatttggcatctgctgac
actgtagttatatttgattctgactggaacccacagaatgatttgcaggcacaggcaaga
gctcatagaattgggcaaaagaaacaggtaaatatttatcggctggtcacaaagggatca
gtagaagaagatattctagagagagccaaaaagaaaatggtgttggatcatttggtaatt
cagagaatggacactacaggcaaaactgtactacatacaggttccactccttcaagctct
actccttttaataaggaagagttgtcagctattttaaagtttggtgcagaggaacttttt
aaagaacctgaaggggaagaacaagagccccaagaaatggatatagatgaaatcttgaag
agggctgaaactcgggaaaatgagccaggcccattaactgtaggagatgagttactttcc
caatttaaggtggccaacttttcaaacatggatgaagatgatattgagttggagcctgaa
cgaaattcaagaaactgggaagaaatcattccagaggttcataggcgaagaatagaagag
gaggagaggcagaaggaacttgaagaaatttatatgcgtccaagaatgagaaactgtgct
aaacagattagttttaatgggagtgaaggaagacgtagtcggaatagaagatactctgga
tctgatagtgattctatctccgaaaggaaacgacccaaaaaacgtggaagaccacgaact
attcctcgagagaatattaaaggatttagtgatgcagagattaggcggtttatcaagagt
tacaagaaatttggtggccctctggaaaggttggatgctatagctagagatgctgaatta
gttgataaatctgagacagaccttagacgattgggggagctcgtgcataatggatgcatt
aaggctttaaaagacagttcttctggacaagaaagagcaggaggcagacttggaaaagtt
aaaggcccaacattccgaatatctggagtacaagtgaatgcaaaactggtcatctctcat
gaggaagagttggcaccattgcacaaatccattccttcagatccagaggaaaggaaaaga
tatgtcatcccatgccacaccaaggcagctcattttgatatagattggggcaaagaagat
gattctaatctattaataggcatctatgaatatgggtatggcagctgggaaatgataaaa
atggatcctgacctgagcttgacacagaagattctgccagatgatccagataagaaaccc
caggccaagcaattacagactcgtgcagactacctcattaaattactcaataaagatctt
gcaagaaaggaagcacaaagactttctggtgcaggaaattcaaagcggaggaaaatgaga
actaagaagaataaagtgttaaaatctgcaaaaatgaaagaggaggtaaaaagtgactct
tcactaccagcctcagaaaaatctgatgaagaagaagatgactataaggatgagatctct
tcagtgaaacatccaaataaaaaaataaaaacagaaaaagaaaatgaagaaaagcctgaa
tcagatattggtgtaaagaaggatacagaagaaaagagagagacaaaagaaaaggaaaat
aagagggacctgaaaagggagaaaagagaaaaagaggataagaaagaattaaaagaaaaa
gaagcgaaagagaagagagagaataaaataaaagagtccacacagaaagaaaaagaagta
aaggatgaaaagacaaacgaagtcaaatctgaaagtaaagacaaaactaagaaaactctt
ttagcagatactccggttcacattactgcaagtagtgagccagttcctatatcagaagaa
tctgaagaactggatcagaagacattcagcgtatgtaaagaaagaatgaggcctgtcaag
gcagcactgaagcagctagacagaccagagaaaggcctttcagaaagggaacagctggag
catactagacagtgtttgatcaaaattggggatcacatcactgagtgtctaaaagaatac
acaaatcctgatcaaattaaacaatggaggaaaaacttgtggattttcgtatctaagttt
acagaatttgatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaa
gaatctcagcaacacaatgaccagaatattggcagcaatgtaaatacacatgtgattaga
aatccagatgttgaacgattgaaagagaatacaaaccatgatgacagcagcagggacagt
tattcttctgacagacatttgtcacagtatcatgatcatcacaaagacagacatcaggga
gatgcttacaaaaaaagtgactctaggaaaagaccctattctgccttcagcaatgggaaa
gatcacagggattgggatcactacaaacaggataacagatactacagtgatagtaaacat
agaaagctggatgaccacaggagtagagatcacaggtcaaatctggaaggaaatttaaag
gacagccggtctcattccgatcaccgttcccattcagaccacagaatacactcggatcac
cgatccactgcagattatggccatcataaatcgtccagggattataggtaccactcagac
tggcaaatggaccatagagcttccagtagtggccctaggtcaccactagatcagaggtct
ccttatggctcaagatctcccttaggacacagatctccatttgaacactcatccgaccac
aaaagtacaccagaacatacatggagtagccggaaaacataa
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integrated database retrieval system
