KEGG   Crocodylus porosus (Australian saltwater crocodile): 109308315
Entry
109308315         CDS       T07440                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cpoo01009]
    109308315 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpoo04121]
    109308315 (TRIM42)
Protein phosphatases and associated proteins [BR:cpoo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109308315 (TRIM42)
Ubiquitin system [BR:cpoo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109308315 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Ig_J_second BORCS7
Other DBs
NCBI-GeneID: 109308315
NCBI-ProteinID: XP_019388105
Ensembl: ENSCPRG00005004672
LinkDB
Position
Unknown
AA seq 732 aa
MGRTLCLCCLFWPCCPGCHCCPPILTKEEECCLCWRFLFTEERNCNCFPCTYHEDRSCQC
CHCTCSENPNCIWCCCSFSTDEDCKCCCCATDENTVCQCYESTCCRNVTRSPYHLRIPRR
NHSRLSLPGPRIRSDTSVITLDKDVSGHSFRDQLTCPACNQLYLHPFMLPCKHCVCGDCI
GKRKAKAEVSENFFILICPVCNKAHCLPYSNKIQLKKNLLRAKLAKRYMQKHGLIRWRFD
RTQASIYCQACKEKKRKASKRCLTCQMNFCKECLSLYHRDDSAQEHVFTKAYQADQEQSN
CLVHSSSPISEYCVDDHELICDYCKNSLHSEHETLPLIVACSREAGALFNAIAKFKKVRY
GVDNDLLETFVLKNNFKSYKDTKRKEIRNGFLRLRSILHEREKEIMELLENLEFKKQRGI
TEYMEHASKKLAYMDSLLQYSKEALKEENQIAFLQSSNSLVNEIEDAITNIYQPNPCLRE
DPIQNLKLNFEELSTNLNGIFPTSVRIKQSDDKVNKYPYPSNSGIIVPTRVSSTHLSKPK
IALQSPSLTSLCDPNVLKKETYGRPKSTPPLYPKQSNKMFACWDTSEISREETSPSIIHS
PEMIEDASLTAPGLVIIYQTLAYPKSAKIYWTCPTEDVDFFDVEFYEVIDITTDNVIQTQ
LAGQLSGIKHQNLEIHNLDPSTEYLFKVRAVNTNGAGQWSEICKVITPDEREKVQGRWGL
LRSIHSSLHKEL
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgggcaggactttatgtttatgttgcttattttggccatgttgcccaggctgccattgc
tgtccgccgatcttaacaaaggaagaagaatgctgcttatgttggcgtttcttatttact
gaggagcggaattgcaactgttttccctgcacttaccatgaagatcgatcttgccagtgt
tgccattgtacatgttcagagaacccaaattgtatttggtgctgctgctctttctcaact
gatgaagactgtaagtgttgctgctgtgccaccgatgagaataccgtttgtcagtgttat
gaaagcacatgctgcagaaatgttacccgttcaccctaccatctaagaatcccaaggaga
aatcattcaaggctgtctttaccaggccctagaattagaagtgatacatctgtcattaca
ttggacaaggatgtctcagggcatagttttcgtgatcaactcacctgtccagcatgtaac
caactgtacctccacccatttatgcttccctgtaaacactgtgtttgtggggattgtata
ggtaaaaggaaagccaaggctgaagtgtctgagaactttttcattctcatatgcccagtg
tgtaacaaagcacattgccttccctattctaataaaattcagctgaagaagaatttactg
agagccaaactggctaagagatatatgcagaaacatggccttatcaggtggagatttgac
agaactcaggcatcaatttattgtcaagcttgcaaagagaagaaaagaaaggcatccaaa
agatgtctgacatgtcagatgaatttttgtaaagaatgtctaagtttatatcatagagat
gattctgctcaagagcacgtttttaccaaagcctatcaagcagatcaagaacagtcaaac
tgtttagtacattccagttcacctatctctgaatactgtgttgatgaccatgagctaatc
tgtgactactgcaagaactcactgcacagtgaacatgagacattgcctctgatagtggca
tgctcaagggaggctggtgccctcttcaatgctattgcaaaatttaaaaaagtccggtat
ggggttgataatgacttattggaaacctttgtgttaaaaaacaactttaaatcctacaag
gacactaaaaggaaagagatcagaaatggattcttaagattacgaagcatactccatgaa
agagagaaagagattatggaattgcttgagaaccttgaatttaaaaaacagagaggaatt
acagaatatatggagcatgcttccaaaaaactcgcttacatggacagccttcttcagtat
tctaaggaagctttgaaggaagagaatcaaattgcatttcttcaatcttcaaattctttg
gtaaatgaaatagaagatgcaatcactaacatttaccagcctaacccatgccttagagaa
gatcccattcagaatcttaaactgaactttgaagagctttcaaccaacttgaatggaatt
ttcccaacctctgttaggataaagcaatcagacgataaagtaaacaaatatccctacccc
tctaattctggcataattgttccaacgcgtgtttccagtactcatttatcaaagccaaaa
atagcacttcaaagtccctctttaacatcgctgtgtgacccaaatgtactaaaaaaagaa
acgtatggaagaccaaaatccacacctcctctttatcctaaacagagtaataaaatgttt
gcatgttgggatacatctgaaatttcacgtgaagaaacatctcccagtattattcatagt
ccagaaatgattgaagatgcgtcattgacagctccaggtctagtcattatctaccaaacg
cttgcctacccaaagtctgccaaaatttactggacatgccctacagaagatgtggacttc
tttgatgtagagttctatgaagtcattgatattactactgataatgttatccagacacaa
ctagctggacagctaagtgggataaagcatcaaaaccttgagatacataatctagatcca
agtacagaatatctctttaaagttcgtgctgtaaatacaaatggtgcaggtcaatggagt
gaaatctgcaaggtcattacaccagatgaacgtgaaaaagtccaaggtagatggggctta
ctgcggagtatccactcttctctgcataaagaactctaa

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