Crocodylus porosus (Australian saltwater crocodile): 109308477
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Entry
109308477 CDS
T07440
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03030
DNA replication
cpoo03410
Base excision repair
cpoo03420
Nucleotide excision repair
cpoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109308477 (RFC4)
03410 Base excision repair
109308477 (RFC4)
03420 Nucleotide excision repair
109308477 (RFC4)
03430 Mismatch repair
109308477 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoo03032
]
109308477 (RFC4)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109308477 (RFC4)
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109308477 (RFC4)
DNA replication proteins [BR:
cpoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109308477 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
109308477 (RFC4)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109308477 (RFC4)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109308477 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
109308477 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_assoc_2
AAA_lid_RFC1
Rad17
AAA_22
AAA_11
AAA_30
DUF815
AAA_16
SLFN-g3_helicase
AAA_24
AAA_28
Mg_chelatase
AAA_14
AAA_5
AAA_19
RuvB_N
TIP49_C
KH_DUF2096_C
AAA_23
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
109308477
NCBI-ProteinID:
XP_019388334
Ensembl:
ENSCPRG00005010711
UniProt:
A0A7M4EVV9
LinkDB
All DBs
Position
Unknown
AA seq
365 aa
AA seq
DB search
MQAFLKGPAAISTRPPAAKERAAAAVGSSSGDGKRLKPVPWVEKYRPKCVDEIAFQDEVV
AVMKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELFRQRVLELNASDERGIQVI
REKVKSFAQLTVSGNRSDGKACPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLI
CNYISRIIEPLTSRCSKFRFKPLSDKIQEQRLLDISEKENVKISSEAVSYLVQVSEGDLR
KAITFLQSATRLTGGKEITEKVVTEIAGVVPKEAIHGVLAACQSGSFEKLETVTKNLINE
GYAASQLVNQLHDVIVESEDLSDKQKSTIAEKLADVDKCLTDGADEYLQLISLCAIMMQQ
LTQNS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcttgaagggcccggccgccatcagcacccggcccccggctgctaaggag
cgggcggcggcggccgtgggcagcagcagcggcgacggcaagagactcaagcctgtgcct
tgggtggagaagtatcgccctaagtgcgtggatgagattgcgttccaggacgaagttgtt
gctgtgatgaaaaaatccttggaaggagctgatcttcccaatcttttgttctatggccct
cctggaacgggaaagacttccactattttggcagcagccagagaactttatgggcctgaa
ctgtttcggcagagagttcttgagttaaatgcttctgatgaacgtggaatacaagtgatt
cgagaaaaagtgaagtctttcgctcagctaactgtatctggaaaccgttcagatggaaag
gcttgtcctccattcaagattgtgatcctggatgaagcagattctatgacctcagcagca
caggcagccttaagacgcactatggagaaggaatctaaaacaacacgtttctgtcttatt
tgtaactacatcagcaggataattgaacccttgacatctcgatgctccaaattccgtttc
aagcctctttcagataaaattcaggaacagagactactagatatttctgaaaaggaaaat
gtcaaaatcagcagcgaggcagtatcttaccttgttcaagtgtcagaaggagacttaaga
aaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaagagatcacagag
aaggttgtcaccgaaattgctggggtggtccctaaagaagcaatccatggagttcttgct
gcctgtcaaagtggctcttttgaaaagctggaaacagtaacgaagaatctgataaatgag
gggtatgctgctagtcagcttgtcaaccagctccatgatgttattgttgagagcgaagat
ctcagtgacaagcagaaatccacaatagcagagaaacttgctgatgtggacaaatgcctg
actgatggtgctgatgagtacttgcagctgatcagcctctgtgccatcatgatgcagcag
ctgactcaaaacagctag
DBGET
integrated database retrieval system
