Crocodylus porosus (Australian saltwater crocodile): 109308586
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Entry
109308586 CDS
T07440
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109308586 (TRPC1)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109308586 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
109308586
NCBI-ProteinID:
XP_019388517
Ensembl:
ENSCPRG00005000420
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAALYQSVDPSASASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKRLLEEN
SSGEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILL
NHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHA
VGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLV
EVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHIDKRGLLEERMNLSRL
KLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGFFWPVLSLCYLL
APKSRVGQIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILW
LIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFPAFDERIMWD
AFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFS
FTIGLTQLYDKGFPVNNDKDCTGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTR
FSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLS
YFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDEN
YQKVMCCLVHRYLTSMRQKMQSTDRATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFY
PRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgtaccagagtgttgacccgtcggcctcggcctcggcctcccccaacaag
ctgctggcgctgaaggatgtgcggcaggtgaaggaggagaccactctggacgagaagctc
ttcctgctcgcctgcgacaaaggtgattattacatggttaagagactgttggaagagaac
agctctggtgaaatgaacataaattgcgtggatgtgcttgggagaaacgctgttaccata
accattgagaatgaaaatttggacatactccagctgcttttggattatggctgccagtca
tcagatgcacttttggttgctattgactcagaagtagtgggagctgttgatatactactt
aatcatcgaccaaaacgatcttcaagaccaactattgtaaaactaatggaacgtattcag
aacccagagtactcaacaaccatggatgtagcacctgtcattttagctgctcatcgaaac
aactatgagatccttaccatgctactgaaacaggatatatcattacccaaacctcatgct
gtgggctgtgaatgcacactgtgtactgcaaaaaataagaaagatagtctacggcactcc
aggtttcgtcttgacatctataggtgtttggccagtccagctttaataatgttaacagag
gaggatcctatcctaagagcttttgaacttagtgcagacttaaaagaattaagtcttgtt
gaagttgaattcagaaatgattatgaggagttagcccagcagtgcaaaacctttgctaaa
gacttgcttgcacaggcacgaaactcacgtgagcttgaagttattctaaaccacacatcc
agtgatgagcatatagataaacgaggattgttagaagagaggatgaatttgagtcgctta
aagcttgccatcaagtataatcaaaaggagtttgttgcccagtctaactgtcagcagttt
ctcaatactgtatggtttggacagatggcaggctaccgacgcaaacacacttgtaagaag
attttgactgttttgacagttggctttttttggccagtgctgtccctgtgttacttgtta
gctccaaaatcacgagtaggtcaaataattcacactccttttatgaagtttattattcat
ggagcttcatatttcacgttcctgttgttgcttaacttgtactcacttgtctataatgaa
gataagaagaacacaatggggccagcacttgagagaatagattatcttctgatactatgg
cttattggaatggtgtggtcagatgttaaaagactctggtatgatggcttagaagacttc
ttagaagaatctcgtaatcagctaagttttgtcatgaattctctgtatctggcaaccttt
gctctcaaagttgttgctcataacaagttccctgcctttgatgagaggataatgtgggac
gcattccatcctacacttgtggcagaaggtctctttgcttttgctaatgttctcagttac
cttcgactcttcttcatgtataccaccagctctatcctagggccactgcagatttcaatg
ggtcagatgctacaagattttggaaaattcttggggatgttccttcttgtcttgttttca
ttcacaattggattgacccaactgtatgataaaggatttcctgtcaacaacgacaaggac
tgtaccgggatcttctgtgaacagcaaagcaatgacacatttcattcgtttattggcacc
tgcttcgctctgttctggtacatattctctctagcacatgtagcaatctttgtcactaga
tttagctatggtgaagagttgcaatcttttgtgggggctgtaattgttgggacctacaac
gtagtggttgtgattgtccttaccaagcttctagtggcaatgcttcataaaagttttcag
cttatagcaaatcatgaagataaagaatggaaatttgctcgtgccaaactttggcttagt
tactttgatgacaaatgcacactgcctccacctttcaatgtcattccttcgcccaagacc
atctgctatctctttaacagcctcagtaaatggatttgctctcatacttcaagtggcaaa
gtaaaacgtcagaatagtttgaaggaatggagaaatttgaagcaaaagagggatgagaat
taccaaaaggtgatgtgttgtttagtccatcgttacctgacctccatgaggcagaagatg
caaagcacggatcgggcgactgtggaaaacttgaatgaactacgacaagatttatcaaaa
tttcgaaatgaaatgagggacctacttggttttaggacctcaaaatatgctatgttttat
ccaagaaactag
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