Crocodylus porosus (Australian saltwater crocodile): 109308606
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Entry
109308606 CDS
T07440
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109308606 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109308606 (TRIP12)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109308606 (TRIP12)
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
HECT type E3
109308606 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
109308606
NCBI-ProteinID:
XP_019388552
Ensembl:
ENSCPRG00005002144
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGVQPQDDAVGGRSHLGQAKHKAHSPPENRKSISKAPKVQ
SNTTSEQSKGHFPKRGCSSSTVIIPQQDDPDRVNTSERQKTGQVPKKDNSRGVKRSASPD
YSRTNSPSSAKKPKALQHAETSSETNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKGG
ATGSSRSQKRKRTENSSCIKSGSAVESTGVEERSAKPTKLASKSVTSAKAGCSTITDSSS
SASTSSSSSAVGSTSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQSKAGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETAKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESETLLTSPPKA
CTNGSGTLGTTTTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRL
KRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQY
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVLNPLEVYLISIPPENITFEDPSLDVILLLRVLHAISRYWY
YLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCS
VEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFE
SVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggtccaaccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagaatagaaagtctatttcaaaggcacccaaagtgcag
tctaatactacttctgagcagtccaagggacactttcctaaaagaggctgtagttcgtct
actgttataataccacaacaagacgacccagacagagttaatacttcagaaagacaaaaa
acggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtccagat
tacagcaggaccaattcacctagctctgctaaaaaacccaaagcacttcagcacgctgaa
acttcctcagaaacaaacaagccacattctaaatctaagaaaagacacttagaccaagaa
caacagttgaagtctgcacaattgccatcaacgagcaaggctcacaccagaaagggtgga
gctactggtagctcccgaagtcagaaaaggaaaaggacagaaaattcatcttgtataaag
agtggttcagcagttgaatcaactggcgttgaagagaggtcagcaaaacccaccaagctg
gcttcaaaatcagtgacctcagccaaagctgggtgtagcaccatcactgattcttcctct
tcagcttctacatcctcctcttcttctgctgttggctctacttctactgtacctcagggt
gctagagtgaaacaaggaaaagaccagagcaaggccaggcgttcccgttctgcatccagt
cccagtccccgaaggagcagcagagataaagaacagagtaaagcgggtggctcatcaaag
tttgattgggctgctcgcttcagccccaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcttcgaagtcagaaacagcaaaacctggaccatcaggattacaggctaaacta
gctagtttaagaaaatctacaaagaagcgcagtgagtcaccacctgctgagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaaaatggctgatcct
gataacaaccaggatggagttaattcttcagctgcacggacagatgaagctccacaagga
gctgcagcttctagttcagttgctggagctgtaggcatgacaacctctggagaaagtgaa
tcagatgattctgagatgggaaggctgcaagctctgttagaggctaggggtcttccccct
cacctttttggccctcttggtcctcggatgtcgcagctctttcacaggacaattggaagt
ggagctagttctaaagcccagcagcttctacagggtctccaggccactgatgaaagccag
cagttacaagcagtaattgagatgtgccagttgttggttatggggaatgaagaaacttta
ggaggatttcctgtcaagagtgttgtaccagctttgataacattgctacagatggaacat
aactttgacattatgaaccatgcttgtcgagccttaacgtacatgatggaagcacttccc
aggtcatctgctgtagtggtagatgcaattcctgtctttttggaaaagctgcaagttatt
cagtgtattgatgtggcagagcaggcattgactgccttggagatgttatctcgcagacat
agtaaagctatattgcaggcaggtggcttggcagactgcttgctgtatctggagttcttc
agcataaatgcccagcggaatgcactagccattgctgctaattgctgccagagcatcaca
cctgatgagtttcactttgttgcagattctctgccattgcttacacaaagattaacccat
caggacaaaaagtctgtagaaagcacttgtctctgttttgcacgtctggtagacaatttc
cagcatgaagagaatttgcttcagcaagttgcttctaaggatttgctcacaaatattcaa
caactcctggtagtgactcctcccatcctgagctctgggatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacacttgcagttcaacttatgaagcaaaat
attgcagaaacacttcacttccttctctgtggagcctcaaatgggagttgtcaggaacaa
attgaccttgttcctcgaagtcctcaagaactttatgagcttacttctcttatctgtgaa
ctgatgccttgcctgcctaaggaaggaatttttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagatggtgcaatatggcaatggcgagatgacaggggtctttggcat
ccttataacaggattgatagccggataattgaggcagctcatcaggttggcgaggatgag
ataagtctgtctacattagggcgtgtttatactattgacttcaattctatgcagcaaatc
aatgaggacactggaacagcacgtgccattcagcgaaaaccgaaccccttagccaatact
aacactagtggacattcagaattaaagaaggatgatgctcgagcgcagctaatgaaagag
gatccagagttggcaaaatcctttattaaaacattatttggtgttctttatgaagtgtat
agctcttcagctggacctgctgttagacataagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgtattgaaaaaccatgcagtttcaagtcat
attgcctccatgttgtcaagccaagaccttaagatagtagttggagcccttcagatggct
gagatcttaatgcagaaattacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaatctagcagagtctgagactttgttgacaagtccaccaaaagca
tgcactaatggatcaggaacgctgggtaccactaccacaataagcactggaacagctact
gctgccagtaatgcagctgcagacttgggctctcccagcttacaacacagcagagaagat
tctctggacctgagtccacaggggcgactaagtgatgttctaaagaggaaacgactgcca
aaacgcggaccccgaaggccaaagtattcgcccccaagagatgatgacaaggtagacaat
caagctaaaagccctacaactactcagtctcctaaatcttccttcttggcaagcttgaat
cctaaaacatggggaagattaagcacacagtccaatagtaacaacattgaaccagcacgc
acagcaggagtcagtggtcttgcaagggctgcttcaaaggacaccatatccaataacaga
gagaaaattaagggttggattaaggaacaagcccataaatttgtggaacgttattttagc
tctgagaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgca
actgaacaactcaacctccaggtggatggtggaactgagtgccttgtagaaatccgtagc
atagtctcagagtctgatgtctcctcatttgaaatccagcatagtgggtttgtgaaacaa
ctcctgctttacttgacatctaaaagtgagaaagatgctgtaagcagagagatcagatta
aaaaggttccttcatgtgttcttttcttctccacttcctggagaagaaccccttggaaga
ttagagccattagaaaatgcacctttgttggcattagtgcacaaaatgaacaactgcctc
agtcagatggagcagtttccagtcaaagtgcatgatttcccaagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaatttttcaacacacatcagtta
aaatgccagctgcagagacatccagattgtgctaatgtgaaacaatggaaaggtggacct
gtgaagatagatcccctggctttggtacaggccattgaaagataccttgttgttagagga
tatggaagagtaagagaggatgatgaggatagtgatgatgatggatcagatgaagaaata
gatgaatctctggctgctcagttcttaaattcagggaatgtgagacaccgactgcagttt
tacattggcgatcatttgctgccatataatatgactgtatatcaagcagttagacaatat
agtttacaggctgaggaggagagagagtctacagatgatgaaagcaacccattaggaaga
gctggaatttggacaaagacgcacaccatttggtacaaaccagtgcgagaggatgaagat
ggtaacaaggactgtgttgggggtaaaagaggaagggcacaaactgctcccacaaaaact
tctcctagaaactcaaaaaagcatgatgagttgtggcacgatggtgtgtgcccttcagta
ttaaatcctttggaagtttacctcatatctataccaccagaaaacataacatttgaagat
ccttcattagatgttatcctcctcttgagagttttacatgctatcagtcgatattggtat
tatttgtatgataatgcaatctgtaaggagattattccgacctcagaatttatcaacagt
aaactgacagcaaaagcaaacagacagcttcaggatccattggtaatcatgacgggaaac
ataccaacttggctgacagagcttggaaaaacctgcccatttttctttccattcgacact
cggcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcagagattacta
gacactaatccagaaatcaatcagtcagattctcaggatagcagagtagcaccccgactg
gacaggaaaaaacgcactgtgaacagagatgaactgttgaaacaggcggaatctgtgatg
caagatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggtact
ggtctaggccctacactggagttttatgcacttgtatctcaggaactacagagagcagat
ttaggcctctggagaggagaagaagtaactctagccaatccaaaaggaagccaagaaggc
accaagtatattcataatctacaaggattgttcgcacttccctttggtagaacagctaaa
ccagcacacattgcaaaagttaaaatgaaattccgcttcttaggaaaactaatggccaag
gctatcatggattttagattggtggaccttccccttggcctgcctttttacaagtggatg
ttacgacaggaaacttccttaacctcacatgacttgtttagtattgatccagtggtagcc
aaatcaatatatcatcttgaagatattgtgagacagaaaaaaagacttgaacaagataaa
acacagaccaaagaaagtctacagtatgcattggaggcccttactatgaatggttgttca
gtggaagatctaggcctggatttcacacttcctgggtttcccaatatagagctgaaaaaa
ggggggaaagatgtacctgtcacaatccacaatttagaggagtatctcagacttgttata
ttctgggcactgaatgaaggtgtggccagacaatttgattccttcagagatggatttgaa
tcggttttccccctcagccatcttcagtacttctatcctgaggagttggaacagcttctg
tgtggcagtaaaacggatacttgggacgcaaagacactaatggagtgttgcaggccagat
catggttatacgcatgacagccgagctgtgaagtacctgtttgaaattctcagtagtttt
gatagtgagcagcaaagattatttctccagtttgtgactggtagccccaggctgcctgta
ggaggttttagaagtttgaatcctccattgacaattgtacgtaagacatttgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaactatctcaagttgccg
gactattcaactattgagataatgcgagaaaaactcttgatagctgcgagagaagggcag
cagtcattccatctttcctga
DBGET
integrated database retrieval system
