Crocodylus porosus (Australian saltwater crocodile): 109308840
Help
Entry
109308840 CDS
T07440
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109308840 (VPS50)
Membrane trafficking [BR:
cpoo04131
]
Protein recycling
Others
EARP complex
109308840 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
109308840
NCBI-ProteinID:
XP_019388816
Ensembl:
ENSCPRG00005013792
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQENVHDLSPIENFRIPSKEEFRELREQPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELEKLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYAKELE
RVTSLQTGLQLAAVICTNGRRHLNTAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHETHDRDEGAALSSV
SDGSNAVGAEETNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
IISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLEELRMFLENETWELCPVKAS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTVTLFEQYCNGGNPFEIQANNKDEETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDVPVKSISRETLKSRKRSDY
SLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFELTGLGLSSSRLRTTLNRIQESLIDLEVSADSTVTLTAVEERKEKVPSLHLSHLVVL
TSGNTLYGLAERVVATESLVFLAEQFEFLQPHLDTVMPAAKKPFLQQFYSQTVSTASELR
KPIYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctcatgacccgccagggtctcagaagtcctcaggagaatgtt
catgacctcagtcctattgagaattttcggattcctagcaaggaggaattcagagagctg
cgggaacaaccaactgatcctcaagcacagcaagaaataattaatagcattgaagaagtg
tatttttccaatgattcatttgatattgttaagtatgaattggagaagcttcctcctgtc
cttagtcttcaggaattggaagaatacagagataaattaaagcaacaacaagccgctgta
tctaaaaaggttgcagacttgattcttgaaaagcagcctgcatatgctaaggaacttgaa
cgtgttacatctttacagactggccttcagttagctgctgtcatttgcacgaatggaaga
aggcacctgaacactgcaaaggaaggctttacacaagctagcttggggcttcttgcaaat
caaagaaaacggcaattgcttattgggctactaaaatctctgagaacaataaaaacactg
caaagaactgatgtacgtttaagtgaaatgttggaggaggaggattatccaggagctatc
caactatgcttggaatgtcagaaagcagccagcactttcaaacactacagttgtataagt
gaattgaattctaaactgcaagacactttggagcaaatagaggaacaattagatgtggct
ctgtccaaaatatgcaagaactttgatatcagtcattataccaaggtgcagcaagcttat
agattacttggaaagacacagacagcaatggaccaactacatatgcacttcactcaagcc
attcacaacactgtttttcaagtagttcttgggtatgtagaactgtgtgcaggaaacaca
gacaccaaatttcagaagctacagtacaaggacctctgcacccatattacatctgacagc
tacattccatgtcttgctgatctctgcaaagcactttgggaagtcatgcttagctattat
cgaaccatgcaatggcatgagacacatgatcgagatgagggagctgctttatcttcagtt
tcagatggcagcaatgcagttggagctgaggagaccaattttgaccgcagttatgtaaaa
aagaaattagagcatggactttcaagaatatggcaggatgttcagctgaaagtgaagaca
tatctgctaggaacagacctatctaacttcaaatatgatgatttcatttttgtactagat
attatcagcaggctgatgcaagttggagaagaattttgtggaagtaagtcggaagttttg
caagaatctattagaaaacaaagtgttaactacttcaaaaattatcacagaacccgtctt
gaagaactccgaatgttcttggagaatgagacctgggagctttgtcctgttaaggcaagc
tttagtattttacagcttcatgagtttaaattcatggagcagtcacgttcaccatccgtg
tcacctagtaagcagcctgcttcagcaatttctacaacagtcactttatttgagcaatat
tgcaatggaggaaacccatttgaaattcaagccaataataaagatgaggagacagaagat
gtacttgcttctaatgggtatgaatctgacgaacaggaaaagagtgcatatcaagagtat
gacagtgacagtgatgttccagaagagctgaaaagagattatgtggatgaacagacagga
gatgtccctgtaaaaagcatttctcgagagaccctgaaaagcaggaagagatcagattat
agcctcaacaaggtgaatgcccccattctgacaaacactacgctgaatgtaataaggctt
gttgggaaatacatgcagatgatgaacattctgaaaccaattgcatttgatgtgatccac
ttcatgtcccaactgtttgattactatctatatgcagtatatacattttttggccgaaat
gacacgtttgaattaacaggactgggtctcagcagtagcaggctgcgaaccacactgaac
aggatccaagagagcctgattgatctggaggtctctgctgatagcactgttaccctcaca
gctgtggaagagagaaaggaaaaagtgccaagcctgcatctcagtcatctggtagttttg
acatctggaaatacactgtatggtttggcagagagagtggtagccacagaatcattggta
tttttggctgagcagtttgagttccttcagccacatcttgatactgtgatgcctgctgcc
aagaaaccctttctccagcagttctattctcagactgtgtcaactgccagtgaactacgc
aagccaatttattggattgttgctgctaaagctattgactatgaacagatgctgctcctc
atggctaatgtgaaatgggacgtgaaggaaatcatgtcacagcacaatatatatgtagat
tccctattaaaggaattcgaacagtttaacaggaggttaaatgaggtgtctaaaagagtc
cgtattccattaccagtatcaaatattctttgggagcactgcataagattagctaacaga
actcttgtggaaggttacgccaatgtcaagaagtgcagcaatgagggacgtgccttgatg
caactggactttcagcagtttttaatgaagctggaaaagctcactgacattaggccaatt
cctgataaggaatttgtggagacctacattaaagcttactatctaactgaaaatgacatg
gagcgctggattaaggaacatagggaatattctaccaagcaactgaccaatctggtgaac
gtttgtctgggatcccacatcaacaaaaaagcaagacagaaactgctggccgctattgat
gacatagacagacctaaaagataa
DBGET
integrated database retrieval system
