Crocodylus porosus (Australian saltwater crocodile): 109309011
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Entry
109309011 CDS
T07440
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109309011 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109309011 (MYO5C)
04131 Membrane trafficking [BR:
cpoo04131
]
109309011 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cpoo03029
]
109309011 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpoo04812
]
109309011 (MYO5C)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
109309011 (MYO5C)
mRNA cycle factors
P-body specific factors
109309011 (MYO5C)
Membrane trafficking [BR:
cpoo04131
]
Others
Actin-binding proteins
Myosins
109309011 (MYO5C)
Mitochondrial biogenesis [BR:
cpoo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
109309011 (MYO5C)
Cytoskeleton proteins [BR:
cpoo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
109309011 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
109309011
NCBI-ProteinID:
XP_019389109
Ensembl:
ENSCPRG00005012338
LinkDB
All DBs
Position
Unknown
AA seq
1737 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKDYRTGERVLHLRLEDGTELAYSVDPTALPPL
RNPDILVGENDLTALSYLHDPAVLHNLKVRFVESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAM
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDRRHQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASALQPEFKPLKLGSAEEFNYTRMGGSTVIEGVDDR
ADMMETRKTFTLLGLKEDFQMDVFKLLAAILHLGNVQIMAVGDDRSLISLEDKHLDIFCE
LLDLDSEPMAQWLCQRKIITSSETVIKPMTKLQALNARDALAKKIYSHLFDYIVERINQA
LQFTGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPAIDLIEAKMGILELLDEECLLPQGTDENWLQKLYNNFINKNPLFQKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYEVLIEILKSSKFHLCADFFKDNPAPISRF
GSAIKVKPARPVVKAPNKQFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKMPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQHELSLSDKKKVCRTV
LQRLIQDPNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIMIQKNVRGWLQRKKFLRVR
QATIMIQQYFRGQRTVRQAITATALKQTWAAIVIQKYCRGYLVRKLCQLIHVAAVTIQAY
TRGFLARKKYRKMLKEHKAIILQKYARAWLARRRFQNIRRFVLNIQLSYRVQRLQKKLED
QNKENHGLLEKLTSLASTHAHDLDTIQKLELELEKLTTQKRISEDKGKKYKDDKEQKISK
LEKQAKELQEEKEVLQAKLQEKTEEMKDKMDDLTRQLFADVQKEERQRIILEKNFQNQKQ
DYEKEIESLKEEIKTLSEEKIQLQHQIQQDLIIQDGLKMEAEQLTKQLQIIPELQKEIEL
LQAQKIDVEKQAQSQKRELREKMSEVAKQLLDSYDLEDVRSRLSTEDLEHLNEDGEIWFA
YEGLKKATRVLESHFQSQKDIYEKEIEALNFKVEHLSQEINHLQKLFRKENDINDSIRLE
VSRLTSENMVIPDLKQQISELQNQKMDLENHFQEQTAKMKGKMEGISDQLHHNLSKEGTP
RRKLEAENEIYTKEKEKLIAPSQEIQGTNDHLKKQHENEIKRQEASRLAVENMELEEKLD
MKDRMIKKLEDQIRTLTKTIEKANELHVPAAPKEYIGMMEYKKEDEGRIVQNLILDLKPR
GVVVNMIPGLPAHILFMCVRYADYLNDADMLKSFMNIIINGIKQVIKEHIEDFEMVSFWL
SNTYYFLNSLKQYSGEEEFMKHNTPRQNKNCLKHFDLSEYRQILSDLAIHIYHQFIIVME
NNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYSTMCQN
GLDSELLKQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNLQNS
TAKETLEPLSQAAWLLQVNKITDDDAKEICECCTSLSTVQIVKILNSYTPIDDFEKRVAP
SFVRKVQAMLNNREDMPQLMLDTKYLFQVTFPFTPSPYALETIQIPSSFKLGFLTRV
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggctgagctgtacacgcagtacaacagggtttggattcctgataatgaagaa
gtttggcagtcggcagaaatcacaaaggactacagaaccggagagcgtgtgcttcaccta
cgattagaagatggaactgaattggcttactctgttgatccgacagccttgccacctctg
cgaaatcctgacatactcgttggtgaaaatgacctcactgcgcttagctatctccatgac
cctgctgttttacacaaccttaaagttcgttttgtggaatctaagcttatctacacgtat
agcggaatcattctggttgcaatgaacccctacaaacaattaccaatttatggagatgct
attatccatgcatatagtgggcaaaacatgggggacatggatccacacatatttgctgtg
gcagaagaggcttacaagcaaatggcaagaaataacaaaaatcagtccattatagtcagt
ggagaatcaggagctggaaagactgtgtctgctcggtatgctatgagatattttgccatg
gtcagtaagtcaagcagcaatgcacatgttgaggataaagtattggcttccaaccccata
acagaggctgtgggtaatgcaaaaacaacacgcaatgacaacagtagtcggtttgggaag
tacactgaaatcagctttgatcggaggcatcagatcattggagcaaatatgaggacatat
ctacttgagaaatccagggttgtttttcaatcagagaatgaaagaaactaccacatattc
tatcagttgtgtgcatctgctctgcaaccagaatttaagcctcttaaattggggagcgca
gaagaatttaattatacacgaatgggtggcagtactgttattgagggagtcgatgacaga
gcagacatgatggaaactcggaaaacgttcactctcctaggtctgaaggaagattttcaa
atggatgtttttaagttactggcagcaatcctgcacttaggcaatgtgcaaataatggct
gttggtgatgacagatcattaatcagtctggaagataaacatcttgatatattctgtgaa
cttctggatttagatagtgaaccaatggcacagtggttgtgccaacgaaaaattatcact
tcctcagagactgtaataaagccaatgacaaaactacaagctcttaatgccagggatgca
ttggcaaagaaaatctattctcacttgtttgactacattgtggaaagaattaaccaagcc
ttgcagtttactgggaagcagcacacttttattggcgtcctagacatttatggctttgaa
acttttgatgtgaacagttttgaacaattttgtatcaattatgctaatgaaaaactacaa
cagcaatttaacctgcatgtctttaaacttgaacaagaggagtatatgaaggaagatatc
ccatggaccctaatagatttttatgacaatcaaccagccattgaccttattgaagctaaa
atgggaatattggagctgctagatgaagagtgcttgttacctcagggaacagatgagaat
tggcttcaaaagctgtataataattttatcaacaagaacccactctttcaaaagccaaga
atgtcaaacacatcttttatcatccagcactttgctgataaggtagaatataaatgtgaa
ggatttttggaaaaaaacagagatacagtctatgaagttttaattgaaattttgaaaagc
agcaagtttcatctctgtgcagacttttttaaagacaatccagcacccatttcacgcttt
ggttcagctatcaaagtcaaacctgcaagaccagtggtcaaggcccctaacaaacagttt
cggacaacagttggcaataagttccgcagttctttgtatttgcttatggagacacttaat
gcaaccacacctcactatgtccgatgcataaagccaaatgatgaaaagatgccatttgag
tttgactccaagcgggtggctcagcagcttcgagcatgtggtgttctggaaactattcga
attagtgcacagagctatccttccaggtggacatacattgagtttttcagccgttatagc
attctcatgacgcagcatgaactctcgctaagtgacaagaaaaaggtttgcagaactgtt
ttgcagcggctaatccaggatcctaaccagtatcagtttgggcgaacaaaaattttcttt
agagcagggcaggttgcttatttagaaaaactgcggtcagacaaactgaggcaagcgtgc
atcatgatccaaaagaatgtccgaggctggctgcagcggaagaaattcctccgtgtcaga
caagcaactattatgatacagcagtacttccgtggacagcggactgtacggcaagccata
actgctacagccctaaagcaaacatgggcagctatagtcattcagaagtactgtcgagga
taccttgtccgtaaactttgtcagctcatccatgtggctgctgtaacaattcaagcttat
acacgaggatttttagcaaggaaaaaataccgaaagatgctcaaagaacacaaggcaatt
atccttcagaagtatgcccgtgcctggcttgcaaggcgtagatttcagaacattcggcgg
tttgttttgaatattcagctttcatacagggttcagcgattacagaagaaactagaggac
cagaacaaagaaaatcatggcttactggagaaattgaccagcctagcttcaactcatgca
catgacctagatacaatccagaaacttgaattagaacttgaaaaattaaccacacaaaaa
agaatctccgaggataaagggaagaaatacaaggatgacaaggaacagaaaatctcaaaa
cttgagaaacaagctaaagaattgcaagaagagaaagaagttttacaagcgaagctccaa
gagaaaacagaagaaatgaaagataaaatggatgaccttaccagacagctctttgctgat
gtacaaaaagaagaaagacaaagaataatactagagaaaaacttccaaaatcagaagcaa
gactatgaaaaagagattgaatcactgaaggaggaaattaagactctcagtgaagagaaa
attcaactacagcatcaaattcagcaagaccttattattcaggatggcttaaaaatggaa
gcagagcagcttacaaaacagttacagataatacctgaattgcaaaaagaaattgaactg
cttcaggcacagaaaattgatgtggaaaagcaggcccaatctcagaagcgagagttgaga
gagaaaatgtcagaagttgcaaaacaactccttgacagctatgacttagaagatgtaaga
agcaggctctctacagaagatttggaacatttaaatgaagatggagaaatttggtttgct
tacgagggcctgaaaaaagcaacaagagtgttggaaagtcatttccagtctcagaaagac
atttatgaaaaagagattgaagctttgaactttaaagttgaacatctcagtcaagaaatt
aaccatttacagaagttatttaggaaggaaaatgacataaatgacagtattcgactcgaa
gtcagcaggctaacatcagaaaatatggtgatcccagaccttaaacagcagatttctgaa
ctgcaaaaccaaaagatggatcttgaaaaccactttcaagaacagactgcaaagatgaaa
ggaaaaatggaaggaatatctgatcagttgcatcataatctatcaaaggaaggaacccca
aggagaaaactggaagctgagaatgaaatatacacaaaagaaaaagaaaagctgattgcc
ccaagccaagaaattcaggggacaaacgatcacttaaagaaacaacatgaaaatgaaata
aaaaggcaggaggcatctcgccttgctgtggaaaacatggagcttgaagaaaagctagac
atgaaagacaggatgataaagaaactggaggatcagatcaggactcttaccaaaactatt
gaaaaggccaatgaactgcatgtgccagcagcacctaaagaatacattggaatgatggaa
tacaaaaaggaagatgaaggaagaattgttcaaaatctaattcttgatctaaagccacgt
ggtgtggtagtaaatatgataccaggtcttccagctcacatcctatttatgtgtgtgaga
tatgcagactatctcaatgatgctgatatgctgaaatctttcatgaacataatcattaat
gggatcaagcaagttattaaggaacatattgaagattttgaaatggtgtctttttggctc
tccaatacatactattttcttaacagtctgaaacagtatagtggggaagaggagttcatg
aagcacaacactccccgtcagaataagaactgtttgaagcattttgatctttcagagtac
agacagatacttagtgacttggccattcatatctatcaccagttcatcattgtaatggag
aacaacattcagccaatgatagtgccgggcatgcttgaatatgaaagtcttcagggaatt
tctggcttaaaaccaacaggattccgtaaacgttcttctagtatagatgacacagatgcc
tacacaatgacttctatcctgcaacaactcagctatttttatagcacaatgtgccagaat
ggcttggactctgagcttctaaagcaggcagtgaaacagcttttctttctcattggagct
gtcaccctcaatagtctcttcctccgcaaggacatgtgctcttgtaggaaaggaatgcag
ataaggtgcaatatcagctacttagaagaatggcttaaagaaaagaatttgcagaacagc
actgctaaggaaaccctggagcctctctctcaggcagcctggctccttcaagtcaacaag
atcacagacgatgatgccaaggaaatatgtgaatgctgtacatccctgtccactgtgcag
atagtaaagatcctcaattcatacactcctatagatgactttgagaaaagagtggcccca
tcatttgttcgtaaagtccaggccatgctaaataatcgagaagatatgccacagttgatg
ctagacaccaaatatctctttcaagtgacatttccctttaccccctctccatatgcactg
gaaactatacaaatccccagtagtttcaaacttggctttctaacaagagtgtaa
DBGET
integrated database retrieval system
