Crocodylus porosus (Australian saltwater crocodile): 109309299
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Entry
109309299 CDS
T07440
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109309299 (COL25A1)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109309299 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109309299
NCBI-ProteinID:
XP_019389508
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MGGGGKDVPPAAGCPSAPGTGGHGHGAPLLAALLSVLAAASCGYLGLRTSQLQARVSAIE
SAHGGFSAAAAASRLLPGCSLDQLQSVVQETVERLLAQKSYEHLAKIRIAREVPPECNCP
PGPPGKRGKRGRRGETGPPGLPGRNGYPGPIGMDGKLGQPGPQGPPGPKGEKGDQGDQGP
RMVFPKINHGFLSADQQLIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGV
PGEPGKPGEQGLLGPQGPPGQKGSLGVPGIPGKDGQTGDPGLPGAAGERGTPGLKGDPGE
RGEKGDAGENGPKGAMGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP
GFIGPQGEPGLPGLPGTKGEKGESGPPGKGERGEPGAAGPKGKTGEPGTRGPKGSKGDTG
DKGDTGALGPRGPPGQKGDQGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGLK
GEPGSPGIPGADGDQGPKGSKGDMGEPGMSGEKGGIGLPGLPGANGMKGEKGDVGLPGPQ
GPSIIGPPGSPGPHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEPGQKGDRGPLGLPGASG
LDGKPGPRGIDGPIGPHGPAGPKGDRGEKGAVGDPGPRGPYGLPGEKGKKGKKGPKGEKG
EQGAPGLDAPCPLGPDGLPMPGCWQK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcgggaaggacgtgccacctgccgcgggctgcccgagcgcgccgggcaca
ggcggccacggacacggggcgccgctgctggccgcgctgctctcggtgctcgccgccgcc
tcctgcgggtacctggggctgaggaccagccagctccaggcccgggtctcggccatcgag
agcgcccacgggggcttctctgccgccgccgccgcctcccgcctgctgcccggctgctcc
ctggaccagctccagtccgtggtgcaagagacagtggagcggctcctcgctcagaaatcc
tatgagcatttggcaaaaataagaatagcaagagaagtgcctccagagtgcaactgtcca
ccaggccctccagggaaacgaggtaagaggggcagaagaggagagacaggacctcctggt
ctaccagggcgaaatggctatccgggtccgattggtatggatggaaagctgggtcaacct
ggtcctcaaggtcctcctggtccaaaaggggagaagggagatcaaggtgatcagggccct
cggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctcattaaa
cgccgcctcattaagggggaccaaggacaggctggaccccctggtcctccagggccacca
ggaccccgaggtcctccaggagatactgggaaagatggccctcgagggatgcctggagta
ccgggagagccaggaaaaccaggcgagcaaggattgctgggacctcaggggcctccagga
caaaaggggtctcttggagtgcctggtattccaggaaaggatggacaaacgggtgatcca
ggtttgcctggtgcagctggagaaaggggaacacctggacttaagggggatccaggagaa
cgcggagaaaagggtgatgctggagaaaatggacccaaaggtgccatgggtgaaaagggt
gaccctggatcatctgctgcaggaattaagggagaacctggagaatctggtcgtccagga
caaaagggtgaaccaggtctccctgggcttcctggactccctgggataaagggtgagcca
ggtttcattggtccacagggagaacctgggctaccaggattaccaggaacaaagggtgaa
aaaggggagtcaggacctcctgggaaaggtgaacgaggtgaacctggagctgctggacca
aaggggaaaacaggcgaacctggaactagaggcccaaaggggtcaaagggtgacactggt
gacaaaggtgatacaggtgcactaggtccaaggggcccacctggacaaaagggtgatcaa
ggtgcaacagagatcattgactataatggcaacatccatgaagctctgcagaggattact
actctaactgtcacgggtccaccagggccaccaggacctcaaggactacaaggactaaag
ggtgaaccaggatctccaggaattccaggagctgatggggatcagggtccgaaaggctca
aagggagacatgggtgagcctggcatgtcaggagaaaagggtggaattggactgcctggc
ttaccaggagccaatggtatgaaaggagaaaaaggagatgttggtttgccgggtcctcaa
ggtccttctatcataggaccacctggatcaccaggtccacatggtccaccaggccctatg
ggaccccatggactgcctggcccaaagggtgaaccagggttgaatggtcttaaaggattg
aagggtgaaccaggtcaaaagggtgacagagggcccctgggtcttccaggagcatctggc
ttagatgggaagccaggaccccggggtatagatggcccaattggtccacacggcccagca
ggtcctaaaggagacagaggtgaaaagggagctgtaggtgaccctggacccagaggacca
tatggtttgcctggggaaaagggaaagaaaggcaaaaaggggcctaaaggggagaaagga
gaacagggtgcccctggattagatgcaccttgcccattggggccagatggattaccaatg
cctggctgttggcaaaagtga
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