Crocodylus porosus (Australian saltwater crocodile): 109309609
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Entry
109309609 CDS
T07440
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109309609 (PCDH18)
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109309609 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
G1_gp67_N
Syndecan
PAH
BBS1
Androgen_recep
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
109309609
NCBI-ProteinID:
XP_019389896
Ensembl:
ENSCPRG00005007637
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MNCKNLQMHQISSKMHFIFLSALMIISFNKDVLGRNLKYRIFEEQRVGSVIARLSEDVAD
VLLKMPNPSSVRFRAMQRGNSPLLVVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITL
PTEHLQLFHVEVEVLDINDNSPQFSRALIPIEISESAAVGTRIPLDSAFDPDVGENSLHT
YSLAANDFFNIEVRSRTDGAKYAELIVVRELDRELKSSYELQLTASDKGVPQRSGSSTLK
ISISDSNDNSPVFEQQSYIIQLLENSPVGTLLIDLNATDPDEGANGKVVYSFSSHVSSKI
IETFKIDSEKGYLTLLKQVDYETTKSYEIDAQAQDLGPNSIPAHCKIIIKIVDVNDNKPE
INLNLMSLEKEEIAYISEGSPLDTFVALVRVQDKDSGMNGEIVCKLHGHGHFKLQKTYEN
NYLILTNATLDREKRSEYSLTVIAEDKGMPSLSSVKHFTVQISDENDNPPRFQTNRYEVV
ILENNSPGAYITSVVATDPDLGDNGQVTYTILESYILGSSITTYVTIDPSNGAIYALRTF
DHEEENQIAFVVQARDGGSQQLVSNTTVVLTIIDENDNAPVIVGPALRNSTAEISIPKDA
GSGFLVTRIKAIDRDSGMNSELSCSIAADNENSIFVMDPKSCDIHINVSIESVPSKEWEF
SVIVQDKGSPQLSTKALLKCTVFEYVYSFSSTEAPFVSQPSLDVSMITIISLGSICAVLL
VIMVIFATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSH
HRASPSSSPTLERGQLSSRQSHHSHQSLNSLVTISSNHVPENFALELTHATPAVEQVSQL
LSMLHQGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRESPID
RLLGEGFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEF
QSQQQLLQQQQQQQQQQQQQQHALEEDSQAADASEKKKSFSTFGKDCQGEEDSGDTCTSS
LLSEMSSVFQRLLPPSLDNYTECNEMDRSNSLERRKGHLASKTVNYPQGVAAWAASTHFQ
NPANNNGPTLGTHSSAQPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVA
EINKLLQDVRQN
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaattgcaagaacttacaaatgcaccaaatcagtagtaaaatgcactttatatttctt
tctgcactgatgataatatctttcaacaaagatgtcttgggcaggaatttgaaatacagg
atctttgaggagcagagagttggatcagtaattgcaagactatcagaggatgtagctgat
gttttattaaaaatgccaaacccttcttcagttcgttttcgagccatgcaaagggggaat
tctcccttacttgtagtccgggaggataatggagagatcagcataggagctaaaattgac
cgggaacaactctgccagaaaaacttaaactgctccatagagtttgatgtgatcactctg
cctactgaacatctgcagcttttccatgttgaagttgaagtgctggatattaatgacaac
tccccccagttttctagagctctcatacctattgaaatttcagagagtgcagctgtagga
acccggatccctttggacagtgcttttgatccagatgttggggaaaattcccttcacact
tactcacttgctgcaaatgatttttttaatattgaagtgcgatcaaggactgacggtgct
aagtatgcagagctcattgtggtaagagaactggatcgggagttgaagtcaagctacgaa
ctccaactcactgcttcagataagggggtgcctcagcgatctggatcatccaccctaaaa
ataagtatttctgactctaatgacaacagtcctgtgtttgaacaacagtcttacataatt
caactcttagaaaattcaccagttggtactttgctcatagacctcaatgctactgatcca
gatgagggcgctaatggtaaagttgtatattcattcagtagtcatgtgtcttccaaaatt
atagagacttttaaaatagattcagaaaaaggatatctgacccttctcaagcaagtggac
tatgaaaccaccaaatcctatgaaatagatgcacaggctcaagatctgggtccaaattct
atccctgctcactgcaaaattataataaaaattgtggatgttaatgataacaaacctgaa
attaatttaaacttgatgtctcttgagaaagaggaaatagcttacatatcagaagggtca
cctctggatacatttgttgctttagtcagggtacaagacaaggactctggaatgaatgga
gagatagtttgcaagctccatgggcatggccactttaaacttcagaagacatatgaaaat
aactatttaatcttgactaatgccactctagatagagaaaagagatctgaatacagcttg
actgtaatagcagaagacaagggaatgccaagtctctcctcagtaaaacactttactgtc
caaatcagtgatgaaaatgacaacccaccccgcttccagacaaacagatatgaagttgtt
atcttagaaaataattctccaggagcatacatcacatctgttgtggccacagatccagat
ctaggagacaatggacaggtgacttacactatcttggagagctatattttgggaagctcc
ataaccacctatgtgactattgacccatctaatggtgcaatttatgcactcagaactttc
gatcatgaagaagaaaatcagattgcctttgtggttcaagctagagatggaggaagtcag
caacttgttagtaataccactgttgtgttaactatcattgatgaaaatgataatgcccct
gtaattgtgggtcctgccctgcgcaacagtactgcggaaatctcaatccctaaagatgct
ggaagtggcttccttgtcaccaggataaaggccatagatagagactctggtatgaactct
gaactaagttgttctatagcagctgacaatgaaaacagtatttttgtaatggaccccaaa
tcatgtgacatccatatcaatgtcagcatagaatctgttccatctaaggaatgggagttt
tctgtgattgttcaggataaaggcagccctcaacttagcaccaaagcacttctgaaatgt
actgtttttgaatatgtatattcattttcaagtacagaagctccttttgttagccagcct
tccctggatgtctctatgataacaattatatccttaggatcaatatgtgcagtgctgttg
gtcattatggttatctttgctacaagatgcaatcgagagaaaaaggacaccagatcctat
aactgtcgtgtggcagaatccacttaccagcaccacccaaaaagaccctcaagacagata
cacaaaggggacattacccttgtgccaactgtgaatggcactttacccatcagatctcat
cacagagcttctccttcatcctctccaacattagaaagagggcagctgagcagtcgacag
agccaccatagtcaccaatcactaaacagtctggtgacaatctcatcaaatcatgtgcca
gagaatttcgcactggaactcacccatgctactcctgctgttgagcaggtttctcagctt
ctctcaatgcttcatcaaggccagtatcagccaagaccaagttttagaggaaataaatat
tccagaagctacagatatgccctacaagatatggacaaatttagcttaaaagacagtggc
cgtggcgatagtgaagcaggagacagtgattatgatttgggaagagagtctccaattgac
agacttcttggggaaggattcagtgaccttttccttactgatgggagaattcctgcagca
atgaggctatgcacagaggaatgccgagttctgggacactctgaccagtgctggatgcca
cctttgccctctccatcttctgattacagaagtaacatgtttattccaggggaggaattt
cagtcacagcaacagctgctgcagcagcagcagcagcagcagcagcagcagcagcagcag
caacatgcactagaagaagattcacaggctgcagatgctagtgagaagaaaaagagcttt
tcaacctttggtaaagattgtcagggtgaggaagattcaggggacacatgtacctcatct
ctcctctctgaaatgagcagcgtctttcagcgcttgttgcctccttcactggacaactat
acagaatgcaatgaaatggatcgctcaaactcactagagcgcaggaagggacatttggca
tccaagactgtaaattacccacaaggggtagcagcatgggcagccagtacacatttccaa
aaccctgcaaacaacaatgggcctactctggggactcactcaagtgcacagccttcttct
aaatggcttccagccatggaggaaattccagaaaactacgaagaagatgattttgacaat
gtgcttaaccacctcaatgatggtaaacatgaactaatggatgctagtgagctggtagca
gaaattaacaagctgctgcaagatgtccggcagaactag
DBGET
integrated database retrieval system
