Crocodylus porosus (Australian saltwater crocodile): 109309662
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Entry
109309662 CDS
T07440
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109309662 (LRBA)
Membrane trafficking [BR:
cpoo04131
]
Endosome - Lysosome transport
Others
Others
109309662 (LRBA)
Endosome - Golgi transport
109309662 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
109309662 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
SUKH_6
WDR90_beta-prop_4th
Tospo_nucleocap
Motif
Other DBs
NCBI-GeneID:
109309662
NCBI-ProteinID:
XP_019390000
Ensembl:
ENSCPRG00005008982
LinkDB
All DBs
Position
Unknown
AA seq
2871 aa
AA seq
DB search
MASEDKQVAQPTGDDGGGGGGRAGAGSTLQPLHPAVPIRGIRMKFAVLAGLVEVGEVSNR
DIVETVFNLLVGGHFDLEMNFIIQEGEGIICMVDLLDKCDATCQAEVWSMFTAILKKSIR
NLQVCTEVGLVEQVLQRIDKADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEKGKW
PPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVN
NINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWYMVT
IVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMTA
VYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKMLLYDGKLSSGIAFMYNP
RATDAQLCLESSPKDNSSIFVHSPHALMLQDVKAVLTHSIQSAMHSVGGVQVLFPLFAQL
DYRQYSSDEVDATVCSTLLAFIMELLKNSIAMQEQMLSCKGFHVIGYSLEKSSKVHVTRA
VLELCLAFAKYLSNLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLILYTYLSTEFIGTVN
IYNAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGLDGPRPNQKEIFSLRALLLMFVK
QLVMKDHGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNGLRV
VYKLLASKSEGIRVQALKVLGYFLKHLAPKRNAEIMLGHGLFSLLAERLMLQTTLISMTT
YNVLFEILTEQICTQVIHKQHPDPDSTVKIENPLSCFTEVLKVIATLLRNSPQCPETLEV
RRAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSEELKITEMVYAIFRILL
YHAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYREYQGKGGEGSSLGLSTPIRTI
SGVSEAVTAGRQEYVEVRDATSACNVGDDNVEHSTQEKEMKPSTECEQQSHLAPSEGKKP
VEENGQKTPELNRALGLDLSLQKEAVESGDPEITTGIAEAIEDSPSKTKGLVEETPDADG
ASPTTQTILEEMLESPEILDKSTPEVEEEDDFVDLKEESSLPLPSEESVPTGSEEHSNLD
NESQVTPAAEQETISEKEPESTPLESEGAEGQDEIKQELASVSEMRSSQIQEVTTQLNSE
PNESLEEEKTLVSETKVTGEDGNALTSEVSVPSEKKIAKLDVSSVASDTERLELRASTSL
EATHSHRPLPETSRQQDSSGQDLAATSDGQRRDSRSTMFRIPEFKWSQMHQRLLTDLLFS
VETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSA
THELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKNMSSGGILRQCLR
LVCAVAVRNCLECQQHTQLKPNAETLKSHKTIQSLTGAGKSSAKSPVDIVTGGVSPIRDL
DRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERKKPHR
SQSFKGSENGSSETTTDVENPSATFDGSTPVSAEDSESTSSVRRRDSGLGEESASGQANN
SDVVAEAVPQCVSAGPDAISEVLCTLSLEVNKSQENQSEAGNELDNKPASSVAAAKNVNV
KDILRSLVSTPADGAAVDASLLPPTFLGALGDTAAEQPVQFHSFDRSVVVPPKKSTGSSS
AATTNLPTHAVSVVSSLDSAQAPDLTRESPGKGSSNSKLPSVPTVSSVPEDSVSNMSITE
RLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLC
SQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFE
SLCAQYSADKREEEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGSSAPSRPRE
FWRLDYWEDDLRRRRRFVRNPLGSTHPEATLKAAVEHGQCKNCFLPIAAAPEEDVLVRGK
QSIKSQALGNQNSESEILLEGDDDTLSSIEEKDLENLTGPVSLCTPAHLVAPSVVAKGTL
SITSSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFTEIRSVFSRRYLLQNTALEIFM
ANRVAVMFNFPDQATVKKVVNCLPRVGIGTCFGLPQTRRISLASPRQIFKASNMTQKWQH
REISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALN
PKRAAFFAERYESWEDDQVPKFHYGTHYSTASFALTWMLRIEPFTTLFLNLQGGKFDHAD
RTFSSVSRAWRNSQRDTSDIKELIPEFYYLPELFVNSNNYNLGVMDDETVVSDVELPPWA
KTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLSS
ITEPVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQQDVIMVL
KFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEID
PLIATNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQ
VVFGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKTNNIGDNLNGDFATPRAI
LTGHDYEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEGPENSLRPKLIQASREG
HCVVYYENGLFCVFSVNGKLQAAMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVWDLK
QLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaggacaagcaagttgctcagccaacaggtgacgatggaggaggcggcggc
ggccgggcgggcgcggggagcacgctgcagccgctgcacccggcagtgcccatccgaggc
atccgcatgaaatttgccgtgctggcggggctagtggaagtcggggaagtgtccaaccgg
gacatcgtggaaactgtgtttaacctgcttgtaggaggccattttgatctggaaatgaac
tttattatccaagaaggagagggtattatatgcatggtagatctgttggataaatgcgat
gccacttgccaggctgaggtatggagcatgtttacagcaatcctgaagaagagtatacgc
aatctgcaagtttgcacagaagttgggcttgttgaacaagtgctccagaggattgataaa
gctgataacatgattgcagatctcttagttgatatgttgggtgtgctggctagctataat
ttgacagttcgagaactaaaattgttcttcagcaaactgcaaggggaaaaaggaaaatgg
ccaccacatgctggcaagctgttgtctgtattaaaacatatgccccagaaatatggacct
gatgccttcttcaactttcccggaaaaagtgctgcagctattgccttgcctcctatagcc
aagtggccctaccagaatggatttacctttcacacttggttaagaatggatcctgtaaac
aatatcaatgtggataaggataagccatacttatattgttttcgaacaaacaaaggactt
ggttattctgctcactttgtaggaggctgtttgattgtgacatcaataaaatcaaaagga
aaaggtttccagcactgtgtgaaatttgatttcaagccacagaagtggtatatggttact
atagttcacatctacaaccgttggaagaacagtgaacttcgatgttatgtgaatggggaa
ctggcatcatatggagaaataacgtggtttgttaataccagtgatacatttgataaatgc
ttcctgggttcttcagaaacagcagatgccaatcgagtgttttgtggacagatgacagct
gtttaccttttcagtgaggctcttaatgctgctcagatctttgccatttatcagcttggg
ctgggatacaagggaacattcaaattcaaggcagaaagtgatctatttcttgctgagcat
cacaaaatgttgctgtatgatggcaaactgtccagtggaattgctttcatgtataatcca
agggctacagatgcacagctctgtttggaatcctcacccaaggataactcatctatcttt
gttcattctccacatgccctcatgctgcaggatgtgaaagcagtcttaactcactccatc
caaagtgctatgcattcagttggaggggtgcaggtactttttcctctgtttgcacagtta
gactataggcaatactcatcggatgaagttgatgcaactgtttgttccacgctgttggct
ttcatcatggagttactgaagaactccatcgctatgcaagaacagatgctttcctgtaag
ggcttccatgtgataggatatagtctggaaaagtcttccaaagtccatgttacccgagct
gtgctagagctatgccttgcctttgctaaatacttgagtaacttgcacaatggagtgccc
ttgctcaagcagctttgtgatcacattcttcttaatccagcaatatggattcatacccca
gcaaaggttcagttgatcttgtacacgtacctgtctactgagttcattggcactgttaac
atatataatgcaattcggcgagttgggacagttcttctggtaatgcacactttaaagtat
tactactgggtagtgaatcctcaagatcgtagtggaatcactccaaaaggattagatgga
ccccgacctaatcagaaagagatattttctctgcgagcactcttactcatgttcgttaaa
cagctggtgatgaaggatcatggagtgaaagaagatgaattacaggctatccttaattat
ctactcactattcatgaggatgacaatttaatggatgtcctgcagttgcttgttgccctg
atgtcagagcatcccagttctatgattcctgctttcgatcaaaggaatggattacgggtt
gtctacaaacttttagcttcgaaaagtgaaggaatcagggtgcaagctttaaaagtgttg
ggctacttcttaaaacatctcgctcccaagagaaatgctgaaatcatgcttggacatgga
ttattctctttgctggctgaaaggctgatgcttcagacaaccttaatcagcatgaccaca
tacaatgttctatttgagattcttactgagcagatttgcactcaagttatacataaacag
catcctgacccagattcaacagtgaagatagaaaatcctctgagttgttttacagaggta
ctgaaagtaattgcgaccctgctacgtaactctccccaatgtccggaaaccctggaggtc
cgtagagcctttctctcggacatgattaaactttttaataacagcagagaaaacaggagg
agtttgctgcagtgctcggtgtggcaggagtggatgctttccctttgctattttaatcct
aagaactctgaagagctgaagataactgaaatggtgtatgccatattccgaatcttgctt
tatcatgcaatcaaatatgagtggggtggctggcgtgtttgggtggatacgctttcaatc
acacattcgaaggtaacttttgaaatgcacaaagagagtctttcccaaatgtacagggaa
taccaagggaaaggaggcgagggaagtagtttaggactttctactccaatcagaactata
tcgggagttagcgaagctgtaacagcaggaagacaggagtatgtggaggtgagagatgct
acttcagcatgcaatgttggagatgataatgtggagcatagtacccaagaaaaggagatg
aaaccgtcaactgaatgtgagcaacaaagtcatttagcacccagtgaaggaaagaaacca
gtggaagaaaatggtcagaaaacacctgaattaaatagagcacttggcttagatctttct
ctacagaaagaagcagtagaatcaggtgacccagaaatcacaactggaatagctgaagca
attgaagattctccgagcaaaactaagggacttgtggaagaaacaccagatgctgatggg
gcttctccaaccacacaaactatattagaagagatgcttgaaagcccagaaatactggac
aagtcaacaccagaagtcgaagaagaagatgactttgttgacttaaaagaggaaagcagt
ctgcctttaccttcagaagagtctgtaccaacaggcagtgaagagcacagtaatcttgac
aacgaaagccaagtaactccagcagcagaacaggaaactatctctgagaaggagccagag
tcaacacctttagagtctgaaggtgctgaaggccaggatgagataaagcaggaattggct
tcagtgtcagaaatgagaagttctcaaatccaagaggtgacaactcaactcaattcagaa
ccaaatgaatcgttagaggaagaaaaaactcttgtcagtgaaaccaaagtaactggagaa
gatggaaacgcacttacttcagaagtttccgtgccctccgagaaaaaaattgccaagctt
gatgtttctagtgttgcatcagatacagaaagattggaactgagagccagcacaagcctg
gaagccactcactctcacagacccctgcctgagacatcacggcagcaagattcatcaggg
caagatttagctgctacatcagatgggcagagacgagattccaggtctaccatgtttcgt
atccctgaatttaagtggtcacagatgcaccaacgtttgctcacagatttacttttttca
gtagaaacagatatacagatgtggagaagccattctacgaagacagtgatggactttgtg
aacagcagtgacaacgtcatctttgtacataacacgattcacctaatctctcaagttatg
gacaacatgattatggcttgtggtggtatattgccattgctttctgccgctacatctgct
actcatgaactagaaaatattgagccaactcaaggactttcaatagaggcttcagtaacg
tttctccagagattaatcagccttgtggatgtgctaatttttgcaagctctcttggcttc
actgagattgaggctgagaaaaacatgtcatctgggggaattttgcgacagtgccttcga
ctggtgtgtgcagtggcagtaagaaattgtttggagtgtcagcagcatacccaactgaaa
cctaatgcagaaactttaaagagtcacaagacaattcagagcctgacaggagcaggaaaa
tcttcagcaaagagtccagtcgacattgtgacaggtggagtttctccaatacgagacctt
gataggcttctgcaggatatggatattaaccgacttcgagcagtagtattccgagatata
gaggatagcaaacaggctcagtttttggccttggctgttgtgtattttatatcagtcctc
atggtatcaaaatacagggacatattggaacctcagaatgaaagaaaaaaacctcatcga
agccagtcctttaagggatcagagaatggaagtagtgaaacaactacagatgtagaaaac
ccctctgctacttttgatggttcaactccagtttctgctgaagattctgaaagtacatcc
tctgtacgaagaagagactctggccttggagaggaatcggcttcaggtcaagcaaacaat
tcagatgtcgtagctgaagcagtacctcagtgtgtcagcgcaggtcctgatgccatcagt
gaagttctgtgcacactttctttagaagtcaataaatctcaggaaaatcagagtgaggca
ggaaatgaattggataataaacctgcatcttctgtagcagctgccaaaaatgtcaatgta
aaggacatccttagaagcttggttagcaccccagcagatggggctgcagtggatgcttct
cttctaccaccaaccttccttggagctcttggtgatacagcagctgagcaacctgtgcag
ttccattcctttgataggagtgttgttgtacctccaaagaagtcaactggttcctcttct
gcagctactacaaatctacccacacatgcagtgagtgtggtttcttcgctagactcggcg
caggccccagacctgacaagggaatctcctggaaagggatcatctaattcaaaattacca
tcagtccctacggtttcttcagtgcctgaggattcagtctcaaatatgagtattacagag
aggcttgagcatgctttggaaaaggctgccccacttctaagagagatttttgtggatttt
gctccatttctttctcgcactctgttgggtagccacgggcaagagctgctgatagaaggt
acaagtcttgtgtgcatgaaatctagtagttcagttgtggagttggtcatgctactttgt
tctcaggagtggcagaactcaatacagaagaatgcaggcctagcctttattgaacttgtc
aacgagggaagattgttaagccaaactatgaaggaccacctagtaagagtggcaaacgaa
gcagaatttatcttgagcagacagagagcagaggatattcacagacatgctgaatttgag
tcactgtgcgcccagtattctgctgataaacgagaagaagaaaaaatgtgtgatcatttg
attagagccgctaagtaccgggaccatgtgactgcaacccaactaatacagaaaattatc
aacattctgacagacaagcatggagcctggggaagttctgcaccaagtcgtcctcgtgag
ttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaac
ccccttggatcgacacatcctgaagcgacactaaaagcagccgtagaacatggtcagtgt
aaaaactgcttcttgccaatagcagcagctcccgaggaagacgtgctggttaggggcaag
cagtccatcaagagccaggccctgggaaaccagaactccgagagtgagattctcctggaa
ggcgatgacgataccctgtcatccattgaagagaaagacttggagaacttaacgggtcca
gttagcctgtgtacaccagctcatcttgtggcaccctctgtagtagcgaagggcactctt
tccatcacctcttctgaactctactttgaagtagatgaagaagatcctagttttaagaaa
atcgaccccaagattctagcttatacagaaggactccatggaaaatggctttttacagag
attcgttcagtcttttcccgacgctatctcttgcaaaatacagcactggaaatcttcatg
gcaaacagagtcgctgtcatgttcaacttcccagaccaagcaacagtaaagaaagtggtc
aactgtctacctcgtgttggcattggtacttgttttggactaccacaaaccaggcggatc
tctttggctagcccacgtcagattttcaaagcttccaacatgacccagaagtggcagcac
agagaaatttcaaactttgaatatctgatgtttctaaatactatagcaggacgtacttac
aatgacttaaatcagtacccagtattcccttgggttatcacgaattatgaatcagaagag
ctggaccttacacttcctagcaacttcagggatttgtcaaagcctattggtgctctaaac
ccaaagagagcagcattctttgcagagcgatacgagtcatgggaagatgatcaagttcca
aagtttcactatggcacgcattattcaactgcaagttttgcactcacatggatgttaaga
attgagccctttacaacacttttccttaacttacaaggtgggaagtttgaccatgcagat
agaacattttcatcagtttcaagagcatggcgcaacagccagcgtgacacctcagatatt
aaggagctgattcctgaattttattatctcccagagctgtttgtcaatagcaacaattac
aatctaggagtgatggatgatgaaacagtggtatctgatgttgaacttccaccatgggcc
aaaactccagaagaatttgttcgtataaacagattggccttggagagtgagtttgtttca
tgccagcttcaccagtggattgatctaatttttggctacaagcagcaagggccagaggct
gtccgatccctgaatgtattctactatttaacctatgaaggagcagtgaatttgagttcg
ataacagagcctgtattgagagaggctgttgaagctcaaatacgaagttttggacagacc
ccttcccaactgctcatagagccacatcctccaagaagttctgccatgcaggtgtatctc
ctcctgcagagtccattgatgttcacagaccaagctcaacaggatgtcataatggtccta
aagttcccatccaactcccctgtcactcacgtagcagccaacacccagcctggcctggca
actcctgctgtgatcacagtcactgctaacaggctgtttgctgtaaacaagtggcacaat
cttcctgctcatcaaggtgctgtacaggaccagccataccagctgccagtggaaatcgat
cctctcatagccaccaatacaggtatgcacaggaggcaaatcactgaccttttagaccaa
agtattcaggttcattctcaatgttttgtcatcacttctgataatcgttacatccttgtg
tgtggcttctgggacaagagtttccgagtttattctactgatacaggtaaactgatacaa
gtagtgtttgggcactgggatgttgttacctgccttgcccgttcagaatcctacattgga
ggaaattgctacattctctcaggctcacgtgatgcaacactgctgctttggtactggaat
ggtaaaaccaataacattggtgacaacctaaatggtgattttgccactccccgagccatc
ttgacaggacacgactatgagatcacttgtgctacagtttgtgctgaacttggcttggta
ataagtggttcaaaagaaggaccatgtctcatacattctatgaatggagacctattgagg
acattagaaggtcctgaaaattccttgagaccgaaacttatacaggcttcaagagaaggc
cactgtgtcgtatactatgaaaatggccttttctgtgtattcagtgtgaatggaaaactt
caggctgctatggaaacagatgataacataagggcaatccagctgagccgtgatggacag
tacctgcttacaggaggagacaatggagttgtcatggtatggcaagtttgggacctcaag
caactttttgcgtacccaggatgtgatgctggaatccgatctatggccctgtcatatgac
caaaggtgcataatgacgggtatggcttctggaagcatagtcgttttctacaatgatttc
aatcgctggcatcatgaatatcaaacaagatactga
DBGET
integrated database retrieval system
