Crocodylus porosus (Australian saltwater crocodile): 109310170
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Entry
109310170 CDS
T07440
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109310170 (SYNPO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
109310170
NCBI-ProteinID:
XP_019390779
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MLKARLLQPSLQPRPSCIGPTKPSQRSYGFETPKVDAGEGCGCQMLQPEKEKLNPQPSGS
IGPSRLQAQEEKEPGRTNGDLLVPRLASSGRCSSLGEAAGSVADLPRSEPSQEWKVVKVQ
RVLISPVGQPRKANLPRSAELARKELKEAKARSQRIAAQLATPPCSSSKGVLLFHRRKQR
VNEFTSESLGSSRQQAAVRDGPQALPRGTPHHGTELSLSRPAEGSREPGGSRRAEYPGLP
ARGDMMEAYEDNAPLEKPRSSPGNGEEMPSQASTLPSLEGSPSKDVPLVPLSVYLKETTE
MAATNGVHEPDGGQHAPATVHEKSTPDGLKEMAQSPAVLAEMHDAPVVDKEKNGEALGTE
PPMPAPEKEDAVPAASQQPTVPGVSKEQNGAPKRQYCEVHLTLAKPKPVKNRTARPFGTQ
SSAVPSQPAEKPPAVDLPEPPTYTETLSSPPPVTRVWSPPAYSALYPSPEQKPLLIQSPR
SVESKSAPVPKTGVLEESITRRGNKKSMFTFVEKPKLSPNPDLLNLVQNADSRKKQKDHG
EPAPEEEPFALGAEASNFLHENAPKAGPHLAPADNPPAWSSCLRSPRIQPKPKIKPTQSL
TEAKGKGAELFARRQSRMEKYVIESPAHPHAARSPSPTMSLPPSWKYDPSMPVSPMVSRH
AVKSPSRPAKTPPASLYSGYVTDSEIAQKELEISKQQPYQLQPSLFILSPSKDPLRSLPR
GALPPKPMPPDPQAYTRQTPCPTAPLPPSPVLHPPALSISSRPASRPFSATAGTVPTTQD
IRASARAPLEVPVASPSRVLLPAARGVFQAPRPSYSTRSAGIEAQDRRSSLPASPTCVPR
FMPRMGSLDGWLSPSLLPEPEESLAELRHLASPSPPPMSPAWSDRSLSPLRQEPDLKASR
QMQARLARNIINAARRKSSSPKAPGTEGIQPFSPPARGADSPCLSPLQSLRLEGPRQGST
GTLGAWSPTERSPLQSPRAARGARAGASSSHGNSLPAPKATWTDDHRVFVPPHNAGGLPA
STSTCPSPGSLVASSLLFKSPPVGARSPAKPYTSRSPTDSDVSLDSEDSGAKSPGIRSFN
ICPRGWNGSLRLKRASLPSEAPCTS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggcaaggttactgcagccttctctgcagccccggcccagctgcatcgggccc
acgaagcccagccagcgctcctatggcttcgagactcccaaagtggatgcaggagagggc
tgtggttgtcagatgctgcagccggagaaagagaagctgaatccccagccatcgggaagc
attgggccttctcgcctgcaggcccaggaggaaaaggagcccgggagaacgaatggagac
ctgctggtgcccaggctggcgtcctctggcaggtgctcgagcctgggggaagccgcgggg
tctgtggcggacctgccccgctctgagccaagccaagagtggaaggtggtgaaggttcaa
cgcgtcctcatttctcccgtgggccagccaaggaaagcaaaccttccacgcagcgccgag
ctggcccgcaaggagctgaaggaggccaaagcccggagccagaggatcgcagcccagctc
gccaccccgccctgctccagctccaaaggcgtgctgctcttccaccggcgcaagcagcgc
gtgaacgagttcacctccgaaagccttggcagcagcaggcagcaagcggctgttcgagac
ggcccccaggccctgccgcgcggcaccccgcaccatgggacggagctgagcttgagccgg
ccggcagaaggtagccgcgagccaggagggtcacgccgcgctgagtatcccgggctgccg
gcacgcggagacatgatggaggcctacgaggacaacgctcctttagaaaaaccacggtcc
tctcctgggaacggggaggagatgccctctcaggccagcacgctgccatccctcgagggg
tctcccagcaaggacgttcccctggtccctctaagcgtctacttaaaggagaccacagag
atggcagccaccaatggggtgcatgaacctgacggcggccagcacgcaccagcaaccgtc
catgagaagagcacgccggatggcctcaaagaaatggcgcagagcccggcggttcttgca
gagatgcacgacgcacccgtcgtcgacaaggagaagaacggagaggctctcggcaccgag
ccgcccatgccggcgcccgagaaagaggacgccgtgcctgctgccagccaacagccaacg
gtcccgggggtcagcaaggagcagaacggggcgcccaaaaggcagtactgcgaggtgcac
ctcaccctggccaaacccaagccggtgaagaacaggacggccaggccctttgggacgcag
tcctccgctgtgccaagtcaaccggctgagaaaccgcccgcggtggacctccctgagccg
cccacctacaccgagaccttgtccagccctcctccggtgacgagagtctggtcaccgccg
gcctattcagccttgtatcctagccccgagcagaagccgctccttatacaaagcccgagg
agcgtggaaagcaaatcggcgcccgtgcctaaaacgggggtcctggaggagtccataacc
cggcgggggaataaaaagtccatgttcacctttgtggagaagcccaagctgagccccaac
ccggatctgctgaatttagtgcagaacgcagacagcaggaagaagcagaaggatcacgga
gagccagccccagaggaagagccctttgcccttggggccgaagcctccaacttcttgcat
gaaaatgcacccaaagccgggcctcacttggcccctgccgacaatcccccagcctggtct
tcgtgcctgaggtccccgaggatccagccgaaacctaagataaagcctacccaaagcctc
acggaagccaagggaaaaggggccgagctgtttgcccggaggcagtcgcggatggagaag
tacgtcattgagtcccccgcccaccctcatgccgccaggtcgccgtcgcccaccatgtca
ctgcctccttcatggaagtacgatcccagcatgcccgtatcgcccatggtctccagacac
gcggtcaagagtccctcccgccccgccaagacgccgccagcctccttgtacagcggctac
gtgacagatagcgagattgcccagaaggagctggagatctccaagcagcagccgtatcag
ctccagccatccttgttcatcctttcaccctctaaggaccccctgaggtctttgccgcgt
ggggcactgccgccaaagcccatgccgcccgacccgcaggcgtacacgaggcaaaccccc
tgcccgaccgctcccttgccaccctcccctgttctgcacccaccggccctgtcgatttcg
agcagacccgcgtcccgtcctttttctgccaccgctgggactgtccccacgacccaagac
atccgagcaagtgccagagcccccctggaggtccctgtggcttccccatcccgggtgctg
ttgccagcagccagaggagtcttccaagctcctagaccgtcgtactccacccggagcgca
gggattgaagcccaggacagacgcagctccctccccgcctcccccacctgcgtgccacgg
ttcatgccccgcatgggcagcctcgatggctggctgagcccgagcctgctaccggagccc
gaggagagcctggccgagctccgccatctcgccagcccctcgcctccccccatgtcgcca
gcttggagcgacaggtccctgtccccactgcggcaggagcccgacctcaaggccagccgg
caaatgcaagcacgcctggccaggaacatcatcaatgccgcccgcaggaagagctcatcg
cccaaagcgccgggcaccgagggcatccagcccttctcgccccccgccaggggtgctgac
agcccctgcctgagcccgctgcaatccctgaggctggaggggcccagacagggcagcacc
gggaccctgggggcctggtcccccaccgaacggagcccgcttcagtccccgagagcagcc
cgcggtgccagggctggtgcgtccagcagccacgggaactccctgccagctcccaaagcc
acgtggacggacgaccacagagtcttcgtgcctccccacaatgccggggggctcccagcc
agcacctccacttgccccagccctgggagtctcgttgcctcctctctgctcttcaagagc
cccccggtgggggcgcggtcccctgcgaaaccctacacctcgcgctcgccgacggactcc
gacgtctccctcgactcggaagactccggggccaagtcccctggcatccgcagcttcaac
atctgcccgcggggctggaacgggagcctccggctaaagcgggcgagcttgccctccgag
gctccctgcacctcctag
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