KEGG   Crocodylus porosus (Australian saltwater crocodile): 109310230
Entry
109310230         CDS       T07440                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013  Nucleocytoplasmic transport
cpoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109310230 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    109310230 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpoo03019]
    109310230 (THOC3)
   03041 Spliceosome [BR:cpoo03041]
    109310230 (THOC3)
Messenger RNA biogenesis [BR:cpoo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109310230 (THOC3)
Spliceosome [BR:cpoo03041]
 Complex C
  Other components
   EJC/TREX
    109310230 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109310230 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_HPS5 RMC1_N NBCH_WD40 Tricorn_2nd WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st PD40 Beta-prop_WDR41 Peptidase_S9_N Beta-prop_Nup120_160 Beta-prop_NWD2_C Me-amine-dh_H Cytochrom_D1 Beta-prop_WDR11_1st Beta-prop_LRRK2 YNCE PROPPIN DPPIV_N
Other DBs
NCBI-GeneID: 109310230
NCBI-ProteinID: XP_019390858
Ensembl: ENSCPRG00005013537
UniProt: A0A7M4F4J9
LinkDB
Position
Unknown
AA seq 327 aa
MPAAMALSPYVLAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFVL
EKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGEN
INICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNG
CINILSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSR
LDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAF
ACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcccgccgccatggcgctgtccccgtacgtgttggcgatgcaggagctgttccgcgcc
aacacgcgtagccgcgagttcccggcgcacggcgccaaggtgcactcggtggcctggagc
tgctgtggccgtcgcctcgcgtccggctccttcgacaagacggccagcgtcttcgtgctg
gagaaggaccggctggtgaaggagaacaattaccgtggccatggggacagtgtggatcag
ctgtgctggcacccgagcaacccggacctctttgtcaccgcgtcaggagacaagaccatc
cgtatttgggatgtccgcaccaccaagtgcattgccacggtgaacaccaaaggggagaac
atcaacatctgctggagccccgatggccagaccatagcagtggggaacaaggatgacgta
gtcaccttcatcgatgccaagacccaccgctccaaggctgaggagcagttcaagtttgag
gtgaatgagatctcttggaacaatgacaacaacatgttcttcctgaccaatggcaatggc
tgcatcaacatcctcagctacccagagctgaagcccatccagtccatcaatgcccatcct
tctaactgtatctgcatcaaatttgaccccatggggaagtactttgccacaggaagcgcg
gatgctctcgtcagcctgtgggatgtggatgagctggtgtgcgtgaggtgcttttccagg
ctggactggcccgtgagaacgctgagcttcagccatgatgggaagatgctggcatctgcc
tctgaggatcacttcattgacatagcggaagtggagacaggggagaagctgtgggaggtg
caatgtgagtcacccaccttcactgtggcctggcaccccaagcgcccgctgctggccttc
gcgtgtgatgacaaggacggcaagtacgacagcagccgggaggctggcaccgtgaagctc
ttcgggctccccaacgactcgtag

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