Crocodylus porosus (Australian saltwater crocodile): 109310241
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Entry
109310241 CDS
T07440
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109310241 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109310241 (UIMC1)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
109310241 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
PD40
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
109310241
NCBI-ProteinID:
XP_019390876
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MPKKKKPVEDCDSQTLAGDEDEQRGPASARKKRSFVDAFIVISDSDGEESKEENGLQRKR
TKQQLERAKCAARRKIARRSEMTEEEQFALALRMSEQEARQVNCQEEEEEELLRKAIAES
LHSCQPSSPPVEATSLPTPESGTLPHGASLQDDTESAGALPSSPGSPSAEPCSSSRSLQA
DGSKPAGITRSPLVVLTRLSQEIVESSITSSIVVSPGKSQASLRADEQPASLAGSNTSSV
APSSPSQRLSPTFASFTPGTWRLMPRRLFPASCSPGKATERAQDVPSPPDAGGSGSQRSR
TCAQHGRPRKSQGSGSAPCSQQLGDIRKASVPTETGEQSEAPSQVGTHGQAGKACQLEEG
KDTVHYYWGIPFCPKGADPNQYTQVILCQLEVYQKSLKQAQRRLLHKKEFGEPVVPGSAP
SSPPGPGKAEGVARENGVEEAEDGDMEGRTEPRAGAWLLPSPGRGPGENPAWSPDGKSSA
SEEEPTTSYCQASQVLPAEDAPEDGEPMQITQSISALTPLGSKRSPDIAAESPAAEEITV
CPETQPSPSEAIEPVSKELCSASRDAPGQAAGDEDVGGMLESSLAMAACVACPLCDQGFP
ATEIELHAMYCNGATGEDADEDLPVLTRRQRDTKSRAVRGIPAPRDTDNRSEKCYLCKSL
VPRREYERHVDGCLRAAEGALGTRRLRSAKDDRPEGRLLALLELSESKAAGAAMGVTSSA
GASPRHLLSRAQDDAGNSSGGRCSPPHAALRDSPAKALMSLGEAAACLLDLEEPAGTQPG
SGLQTKAARRRKRKF
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagaagaagcccgtggaggactgcgactcacagaccctggctggggacgag
gatgagcagaggggcccagctagtgccaggaagaagcgcagctttgtggatgcctttatt
gtcatctctgacagcgatggggaggagtcgaaggaggagaatggcttgcagaggaagaga
acaaagcagcagctggagagagccaagtgtgccgcgagaaggaaaattgcacgtaggtct
gagatgactgaagaggagcaatttgcactggccctcaggatgagtgagcaggaagccagg
caagtgaactgccaggaggaggaagaggaggagctcttgaggaaggccatcgctgagagc
cttcacagctgccaaccatcatccccacctgtggaggccacttccctgcccacacctgaa
tcgggcacgctgccacatggcgcttcactgcaggatgacacagagtctgcaggtgctttg
ccatcgtcccctggctccccttctgctgagccctgctcctcctcacggagcctgcaagcg
gatgggagcaagcccgcaggcattaccagaagccccctagttgtgctgacgaggctaagc
caggagatcgtggagagctcgataacatccagcattgttgtctccccagggaagagccag
gcttccctgagggcagacgagcagcctgcctcactggcaggcagcaacaccagcagtgtg
gcacccagctcccccagccaacgtctgagtcccacctttgccagcttcactccaggcacc
tggcggctgatgcctcggagactgttcccagcttcgtgcagcccagggaaagccactgag
agggctcaggatgtgccttctcctcctgacgctggggggtctgggtctcagcggagcagg
acctgtgctcagcatggccgccccaggaagagccagggatcaggcagtgccccatgttcc
cagcagcttggggacatcaggaaagcctctgtgcccactgagacaggggagcagagtgag
gcacccagccaggtgggcacgcatggccaggcgggcaaggcgtgccagctggaggagggc
aaggacaccgtgcactattactgggggatcccattctgccccaagggggctgaccccaac
cagtacacgcaggtcatcttgtgccagctggaggtgtaccagaagagcctgaagcaggcc
cagcgccggctcctgcacaagaaggagttcggcgagcctgtggtccctgggtctgccccc
tccagcccacctggcccagggaaggcggagggagttgccagggagaatggggttgaggag
gcagaagatggggacatggaagggaggactgagcccagggctggcgcctggcttctgccc
tcccctggccgtgggcctggcgagaatccagcgtggagcccagacgggaagagttcagcg
tccgaggaggagcctaccactagctactgccaggcctcccaggtgctgcctgcagaagat
gcccctgaagatggtgagcccatgcagatcacgcagagcatttcggctttgactcccctt
ggcagtaaacggagcccagacattgccgccgaaagccctgctgcagaagagatcaccgtg
tgccctgagacccagccaagtccctctgaagcgatcgagccggtgagcaaggagctgtgt
tcagccagcagagatgcacctgggcaggctgctggagatgaagatgtgggtggtatgttg
gagagcagtcttgccatggctgcatgtgtggcctgcccgctgtgcgaccagggcttccct
gccacggagatcgagctgcatgccatgtattgcaacggcgccacgggagaggatgctgat
gaggacctcccagtgctcacacggcggcagagagacaccaagagcagagcggtccggggc
atcccagcacccagggacactgacaacaggagcgagaagtgctacctctgcaagtcgctg
gtgccgcgcagggagtacgagcgccacgtggacggctgcctccgggccgcggagggagcg
ctaggcaccaggaggctgcgaagcgccaaggatgacaggcccgagggccgcctccttgcc
ctgctggagctctccgagagcaaggctgcaggtgctgctatgggggtcacatcatctgca
ggagcaagcccaaggcacctcctgtccagggcccaggatgatgctgggaacagctcaggt
ggccggtgcagccctccccacgcggctctgagggattccccggccaaggccctcatgtcc
ctgggtgaggccgcagcctgcctgctggacctggaggagccggcgggcactcagccgggc
agtggcctgcagaccaaagctgcccggcggaggaagaggaagttctga
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