Crocodylus porosus (Australian saltwater crocodile): 109310345
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Entry
109310345 CDS
T07440
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310345 (TDRD12)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109310345 (TDRD12)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109310345 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
CS
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109310345
NCBI-ProteinID:
XP_019390971
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MIEVLILKIEDPGCFWVILKGCGSLVDNEVEYRKLHAEMNQFYNQSCRDVDEVMPLTLEE
GQVCVVFCQELRCWCRAVIKTIMSCMEHCLVECFLVDYAKYIPVKTRDIRVAVEAFMRLP
YRARKFRLYRIKPVTLHINFCEDTAEIVPAKIWDGAAIQYFQKLLRETTQIEAKLCAIED
ERFDVYLYVTAQDEKVCVNDELVAKNFACYMSTEENTNNPTNKPSKQSPLSLVDFPEKVI
SPVLALWPVFLQGKAPQNLKTGHTASNPLLEKNCKNLSTTSFNGHTESTVGVFLGFPFKE
HITISGQTDSDLLEIVRKKQLKEMEHDEKSGCVKLLQFLNPDPLKTDHFENEKQAFLKVS
AEQHFVVFNKKIEPCSSLETAPLLVNLKKELLWNNFQGPTFTQSYCWPPIARGCDVVVIS
HHGNDPLLYIPPILTFLQLRGCYKSLPSGNGPTTLIVCPGWKKAQLIFELLKKYGRCSRP
LHPLLLLVGLNNEEVKNIKLQQGCEVIVTTPYSLLRLLEHHSLLLLRLCHLVLDEVEVLL
SEASKQVFMILEYYRKTIPVAGRESVPRQVVVVGTRWNKHIEHVTREFMNDPYIVITSME
EASVYGNVQQVVHLSLNCDKISVLLRILDYTPSNAQKTLLFTNSVDETEMVYRAVESSAI
YCLKIHKEIEYRFKYVEEQWRKKFSPGTHVVLVLTDDCMKYLGITDATCVVHFSFPSSPS
VFGIRLQSMSDNFRSGIEKSSLKDDKFTKAKSILLLTERNGCHAAGVLHYLEHTDAKIPP
ELRDFTAGVLKAKEDMKLARPLCHYLKALGVCKNMRICPDRHQVNLQIDFPPKSSDQITS
AVGYVTILPLHIVDATNYFGRIVDKKEDQYAILAVEMDKYFKKASNKVSVEMVKKLSLYG
LHEEKVFHRVQVLEVFPKEENGFFYNVTIKYIDEGRTGQVQGHQLFPLPAELQSLPPQAV
EFIVCRVKPIDNETEWNPKITRYINQKIKGKLHEARVVLTLGNTVWVDPMVQVTRLPDLK
ISVNEYNIRSEILSMGMGTDNPEHIKQLQKLCESAKMLPPEKKTLQTSIRDMASLQREPE
QDVDSVQSPLLGEKLSENCNFSQTILDQSGPIAKIEVENATQHHHKCFFPEIKWFQKEDT
VTMKIKIRNVTDCKCEFLRNRVTFSAFSEDKFYLVDTELYENILTEKSVCEIKNEEPVII
LAKEKKESWLKLLKHKNPNVSFDFEHWEDCGNESPFPVGAEKLHHPATLAMEEMEESSDS
ETESGD
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagttttaatattaaagattgaagatccaggttgcttttgggtcattctgaaa
ggatgtggatctcttgtagacaatgaagtggaatataggaaactgcacgctgaaatgaat
cagttctataaccaatcttgtagagatgtggatgaagtaatgccattaacgttagaagaa
gggcaggtgtgtgtggttttttgtcaggaactgagatgctggtgtagagcagttattaag
acaatcatgtcctgtatggagcattgcctggtagagtgcttccttgtggattatgccaag
tatattccagttaaaacaagagacattcgggttgcagtggaagcatttatgcgactccca
tatagagcaagaaagtttagattataccgtataaagccagtgacgttgcatatcaacttc
tgtgaagatactgcagaaatagtacctgctaagatttgggatggtgctgctattcagtac
ttccaaaagctgctcagagaaaccacacagattgaggccaagttatgtgctatagaagat
gaacgctttgatgtttatctttatgtaacagcacaggatgaaaaggtatgtgttaatgat
gaacttgttgcaaagaactttgcttgttatatgtctactgaagagaacacaaataatcct
acaaataaaccaagcaagcagtccccattaagtcttgtggattttccagaaaaagtgatc
agtcctgtacttgctctttggccagtgttcttacagggaaaggcaccccaaaacctaaaa
acagggcacactgcttcaaatcctcttctggaaaagaattgtaaaaatctttcaactaca
tcttttaatggacatacggagtctactgttggtgtgtttctgggctttccttttaaagaa
catataactatttctggtcagacagacagtgacttacttgaaatcgtacgtaagaaacaa
ctgaaagagatggaacatgatgaaaagagtggctgtgtaaagcttctgcagtttttaaat
cctgatcctttgaaaacagatcattttgagaatgagaaacaggcatttctaaaggtcagt
gcagaacaacattttgttgtttttaacaagaaaatagaaccttgttcatctcttgaaaca
gcaccacttcttgttaatctgaaaaaggagcttctctggaataattttcaaggccctact
ttcacacagtcttattgttggccacctatagctcgtggatgtgatgtagttgtcatctct
catcatggaaatgatcctctgttgtatattccaccaattcttacatttttgcaattaaga
ggctgctacaagtcattgccaagtgggaatggtccaacaacactaattgtgtgtcctgga
tggaagaaagcacaactcatttttgaattactgaaaaaatatggcaggtgttccagacca
ttgcatccattgttgttattagttggactgaataacgaagaggtcaaaaatataaaactt
caacaaggatgtgaagtgattgtaaccacaccatacagccttttaagactgcttgaacac
catagcttgttgttacttagactttgccatcttgttcttgatgaggttgaggtactgtta
tcagaagccagcaaacaagtatttatgatcctagaatattataggaaaacgatccctgtt
gcagggagggaatctgtgccacgtcaggttgttgttgttggaactcgttggaataaacat
atagaacatgtaacaagagagttcatgaatgatccttatattgtgataacatctatggaa
gaagcatccgtatatggaaatgttcaacaggtagtgcacctttctttgaactgtgacaaa
atctctgtattactccggatattggattacacccctagtaatgctcagaagaccttgctt
ttcactaattctgtggatgaaacagaaatggtttatagagcagtggagagcagtgcaata
tattgcttaaaaatacacaaggaaattgagtatcgttttaaatatgttgaagagcagtgg
agaaaaaaatttagtcctggcactcatgttgtgttagttttaactgatgactgcatgaaa
tacttgggaattactgatgcaacttgtgtggtacatttcagttttccgtcctctccaagc
gtctttggtatacgcttacaaagcatgtctgataactttcgaagtggcatagaaaagagt
tctttgaaagatgacaaatttacaaaggcaaaatccatcttgttgctgactgaaagaaat
ggatgccatgcagctggtgtgctgcattacttggaacacacagatgctaaaattccacca
gaactgcgtgactttacagctggagtgctcaaagctaaagaagatatgaaactagcaagg
cctctttgtcattatcttaaagcacttggggtttgcaagaatatgaggatatgtccagat
cggcatcaagttaatttacaaatagatttcccgccaaagtcttcagatcaaattacatca
gcagttggatatgtcacaatactacctctccacattgtggatgcaacaaactactttggt
cgcatagtagataagaaagaggatcaatatgcaattcttgctgtagaaatggacaagtat
tttaagaaagccagtaataaagtatcggttgaaatggtgaagaaactatcattgtatgga
ttacatgaagagaaggtttttcatcgggttcaagtattagaggtctttccaaaagaagaa
aatggctttttttataatgttactatcaagtacatagatgaaggtagaactggtcaggtt
caaggccatcagttatttcccttacctgcagaattacagagtttgccccctcaggcagtg
gaattcattgtttgtagagtaaaacctattgataatgaaactgaatggaacccaaagatt
actagatatattaatcagaaaattaaaggaaaattgcatgaagcaagagtggtgcttacc
ttgggaaatacagtttgggttgatccaatggtccaggtcaccagacttccagatttgaag
atttctgttaacgaatacaacattagatctgagattttgtctatgggaatgggaactgat
aatccagaacacataaaacaactccaaaaattgtgtgaatctgctaaaatgttacctcct
gagaaaaagaccttgcaaacttctattagggacatggccagtctgcagagggagccagaa
caagatgtggacagtgtgcagagcccattattaggagaaaaattgtctgaaaattgcaat
ttctcccaaactattttggatcaaagtggtcccatagctaaaattgaggtggaaaacgct
acacagcatcatcataaatgtttctttccagaaattaaatggtttcaaaaggaagatacc
gttaccatgaagataaaaataagaaatgtaactgactgtaaatgtgagtttctgagaaac
agggttactttcagtgctttttcagaagacaaattttatttggtggatacagagctgtat
gaaaatatacttactgaaaagtctgtatgtgagattaagaatgaagaacctgtgattatc
cttgcaaaagaaaagaaagaatcatggctcaagctgctaaagcacaagaatcctaatgtg
tcttttgactttgaacattgggaagattgtggaaatgaaagcccctttccagttggtgct
gaaaaattacatcatcctgctacactagcaatggaagaaatggaggaatcctcggacagt
gaaacagaaagtggtgactaa
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integrated database retrieval system
