Crocodylus porosus (Australian saltwater crocodile): 109310360
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Entry
109310360 CDS
T07440
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109310360 (PKD1L2)
04091 Lectins [BR:
cpoo04091
]
109310360 (PKD1L2)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109310360 (PKD1L2)
Lectins [BR:
cpoo04091
]
C-Type lectins
Others
109310360 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Lectin_C
Ion_trans
GPS
PKD
Abhydrolase_9_N
DUF4303
AGA2
Secretin_N_2
DUF4458
Motif
Other DBs
NCBI-GeneID:
109310360
NCBI-ProteinID:
XP_019390988
Ensembl:
ENSCPRG00005005912
LinkDB
All DBs
Position
Unknown
AA seq
2499 aa
AA seq
DB search
MWLLLTVLYSLLLGLAAEEVAVEEGIPCSKYQVAFNRSCYEFVRLPRTFTNAQSWCERGG
GHLVFIENEETQEFLQKHMSKDREWWIGLTMDSTLNETSEGSIMWLDTSNISYSHWHQDQ
PSLFSAACGHILKNAGYEWGVTENCSQEFDFVCEFESGQSIACDNSNATVQCGSGEVIQI
DDSFYGRKTPHYCVLETPLQFDTDDDCSWTSVKDEVAGQCHGLQACQVAADGTFFGDPCP
TLGGYLSVQYHCMEGLQLTVTDTCFIFENITVSLKWLLSPYSGNLSCIISTGDGQTIDPY
YPLTLSSNVTHKYTSPGEFTVFVECTTSEWHVTAQKRVTVQDKMDQLSITGCYSQYGSGN
SSHCWTLYGETLWIQVELNGGSGVTYTVLADNMTLIESTAKTGIIPHNLTLDSTSQQLLG
LGIHLLAIMASSNTTISEVSESLTVHLVEPISGLQASIASHTLEMGKDLEINVSVAHGVP
DKLKFEVVGSSETYSHQKDYLKGEPGIYRVPIHLEGTFLVKVLAMNAFSNMSMDIGSITV
SANNSLKEDAAQDDNISEENTRKTNDKQRNKISIKPSRHVDPFTTVMLSWPDDSESLSFT
WSCGACWPGWNDCVEQQVIPTNHSQVKIPPACLPPPNSAVTVKVTVRNHSKEERQDEQCL
YATAKQELHLDIRCETNCKPVNASEEVVLSVTSQKDPEVMRYNWYLDNTYHAKYNVAKSH
KLYLDKNSSDANPAPLPAACTLKGFRQSSLMLLPSNRSALVLNSSFLQTHGDAFQIKVIA
LTQHEYGEETHIVSMVAAPGVPACAISPEEGSVLTSFTISCSTSCSKDSCLPVHPSLFTY
CFYLKSNSLLHCGPDPELSSIYLPLGEEENNFILHVTVTVSNSFGDTVLTNATVKVRHEE
LDNGNQTLHAIVSEKTNTILKDGNNSMSLFQLYKSVSSVLNQETQQETYNASLRTDTRKE
LRELMLTTLSAVNVTSMQTALKMSEVLKEITHRSEELSSSAQVEASNTLKDVSESLLRVN
MEDSEDDQKRKAAASYLFNAVSNVLEASVHNRTGATSPPEAEKSLVSDKLLNTVENLQSA
FLFGKLPDDDPVVLATPSVAMYINRLQTDSMDGTSIRVSSYTSASFTLPSASSLSVSGDD
DDTLDIRMVSFAVNPFVSSDTSLEISGAVGGLSLTSSNGLVIPVNDLTENIEIMLPRLPA
IQEDRSLLNLGNFSAFQVNITSENTSLVVHLEPEQDIPLVLYLGYGYCPNETNYDMKTHL
SPISVQDTSSTWVLSPEELTFGEGSYYFLVKQDMEMDSTAGSDLTVAVTCFVSQCVFWDE
LQGNWNSYGCHVGPKTTPISTQCLCNHLTFFGSSFFVTPNAIDVSKTVELFGTFVDNPVV
VMTVGCIFLVYVLVLIWARRKDIQDNAKVKITVLEDNDRFAQYRYLVTVFTGHRRGAATT
SKVTLTLYGLEGESEPHHLMDPDTVVFERGGVDVFLLCTLFPLGELQRIRLWHDNSGNSP
SWYVNRVLVHDLARDEKWYFLCNSWLAIDVGECVLDKVFPVATEQDMKQFSNLFFMKTSK
GFRDGHIWYSIFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPAEQKMDLGKI
EFTWQEVMIGFESSLLMFPINLLIVQIFRNTRPRPAQQQKEKKPGKSGRVSPSLPPPPQA
MQSISLTPEAVIKDIKRIANSLFKTLKTPLPSSETVLGKSADINMLLALVEDIICQQNQA
GREFYDESKKKDDPIVITLGSVDIQEKTRSPTPEKGMTDRLKHNDYNRYLYMQLQHVEME
LELLGPYKFQKPQSYTQAVRQVQHMKSLLESQICSSGSINERCSPTPSFSGDGKKVSSSK
GLPWWFVFIGWFLIAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFFESLFITQPLKV
LGFAAFFALVLKKMEQEDEENTAIDGSLSAPGDSNPLFGARRDSRSNIYHPPPMTDIEKM
KRNHIKEQKAFALIREILAYLGFLWMLLLVAYGQRDPSSYYLNKHIENSFTDGFRDVYSY
QDFFTWARTTLVNNLYGSYQGFITDGNSKLVGSARIRQVRVKGDTCPIAPKLQHSVQECH
APYSLQTEDTSDYGERWNVSAFDNSSDFSSAWQYQSQSKLRGHPIWGKLAIYRGGGYVVH
LGTDLKNATRILQYLFSNIWLDTFTRAVFIEFTVYNANVNLFCIISLMFETNALGAFFTH
AELQSIRLYPYTDGLHIFVVAAEVIYFLFVVYYMVIQGKLMRALKWRYFHSKWNLLELAI
ILISWSALSVFVNRTILGARDISYYQEHKDECVSFNETATADAVLGYLIAFLVLLSTVKL
WHLLRLNPKLNMITSTLKRAWGDISGFITVIAIMFLAYSIATNLIFGWKLHSYKTLFDSA
ETMVSLQLGIFNYEEVLDYNPVLGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKYYQA
SEEEEIVDLMLMKLFSFLGIKCKKEQTTDSEERKELAST
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttctcctcaccgtgctctactctctcttgctcggcttggctgcagaggaggtt
gctgttgaagaggggataccttgctccaagtaccaggtggctttcaaccgctcgtgctat
gaatttgtgagactcccacgcactttcaccaatgcccagagctggtgcgagagaggaggg
ggacatctcgttttcattgaaaatgaggaaacccaagagttcctgcagaaacacatgtcc
aaggacagggagtggtggataggactgactatggactctactctgaatgaaacctcagaa
ggatcaattatgtggttggacacttcaaatataagttacagccactggcatcaggaccag
ccatctctcttctcagccgcatgcgggcacatcctgaagaatgctggctatgaatggggc
gtcactgagaactgcagccaggagtttgactttgtctgtgagtttgaatctggccagagc
atcgcttgtgataactccaatgccacggtgcagtgtggctcaggagaagtcattcaaatt
gatgacagtttctatgggaggaagacccctcattactgcgtactggagactcctcttcag
tttgacacagatgacgactgtagctggaccagcgtcaaggatgaagtagcagggcagtgt
catggactgcaggcatgccaggtggcagcagatgggaccttctttggtgatccttgtcca
actttggggggctatttgtctgtgcaataccactgcatggaaggtctgcagctgaccgtg
acagatacatgctttatctttgaaaatatcacagtctctttgaaatggctgctctctccc
tattctggcaacctctcctgtataattagcaccggagatggacaaactattgatccctac
taccctcttaccttgtccagcaatgtaacgcataaatatacatctcctggagagttcact
gtgttcgtggagtgcacgaccagcgagtggcatgtaacagcacagaaacgcgtgactgtt
caggacaagatggatcaactcagcattacaggatgctatagccagtacggatcagggaac
agttctcactgctggacactatatggggaaacgttatggatccaagtggaacttaatgga
ggcagtggagtgacctacactgtcttagcagataacatgactctcattgagtccactgca
aagacagggatcatccctcacaacctgacgcttgacagcacttctcagcagctccttggc
ctggggatacacctactggcaattatggcatccagcaacacaacaatctcagaggtctct
gagagcctcactgttcacttagttgaacccatatctggtcttcaggcttcaatagcctct
cacactctggaaatgggaaaagacttggagatcaatgtctctgtggctcatggtgtacca
gacaagctaaagtttgaagtggttggctccagtgaaacgtattctcaccaaaaagactat
cttaaaggagaacctggaatatatagagttcctattcatttggaaggtacttttctggtc
aaggtgctggccatgaatgccttctcgaacatgagcatggatattgggagcatcacagta
tcagccaacaattctcttaaagaagatgccgctcaggatgacaacatatccgaagaaaat
acccgaaagacaaatgacaaacaaagaaataaaatatccattaagcctagtcgccacgtg
gatcccttcaccacagttatgctcagctggccagatgacagcgagagcttgagcttcaca
tggtcctgtggtgcctgctggcctggctggaatgactgtgtggagcagcaagtcatcccc
accaaccacagccaggtgaagatcccacctgcctgcttgcctcccccgaactcggcagtg
accgtgaaagttacagtgaggaaccacagcaaagaagagaggcaggatgagcaatgtctg
tatgcgacggcaaagcaagagctgcacctggacatcaggtgtgagacaaactgcaagcca
gtaaatgctagtgaagaagttgttttgagtgtcaccagccagaaggacccagaggtcatg
cgctataactggtatttggacaacacataccacgcaaagtataatgtggccaagtctcat
aaactttatctggataaaaattccagtgatgccaatcctgctccactccctgcagcctgc
actctgaagggtttccggcaaagctcattgatgctgcttccgagcaatagatctgcattg
gtattgaacagctcctttctgcagacacatggagacgcattccagattaaagtcatagca
ctgactcagcatgaatacggtgaagaaactcacattgtcagcatggtggctgcaccagga
gtgccagcctgcgctatatcccctgaggaggggtcggtgctcaccagtttcaccatatcc
tgcagcacttcctgctcgaaggactcgtgcctgcctgtgcaccccagtctgttcacatat
tgcttctatctgaaatcaaattctctgttgcactgcggcccagatcctgaactctcatcc
atttatcttccacttggagaagaggaaaacaacttcattttacatgtcacagttactgtc
agcaatagctttggtgacacagttcttactaatgctacagtcaaggttagacatgaagaa
ctggataatgggaaccagaccctgcatgccattgtatctgagaaaacaaacaccatccta
aaagatgggaacaacagcatgtccctgttccagctgtacaaatcagtatcttcagttctc
aaccaggagacccagcaagagacctataatgcgtctctgcggacagacacccggaaggag
ctgagagagctgatgctgacgactctgtctgctgttaacgtaacatcaatgcagactgct
cttaagatgtcagaggtcctgaaagagatcacacacaggagtgaggagctctcctcctca
gcccaggtagaagccagcaacacgctaaaagatgtcagtgaatccctgcttagggtgaac
atggaggacagtgaggatgaccagaagcggaaggcagcagccagctacctatttaatgca
gttagcaatgtgctggaagcgtctgttcataacaggactggggctacatcaccaccggag
gctgaaaagagtctggtgtcagacaagctgctgaacacagttgaaaatctgcagagcgcc
ttcctgtttgggaagctaccagatgatgaccctgtggttctggctactccctctgtggca
atgtacataaacaggttacagacagacagcatggatggtacatccattcgtgtctccagt
tacacctctgccagctttactctgccatctgcctcttccctaagtgtctcaggagatgat
gacgacactctggatataaggatggtgagctttgcagtgaatccctttgtatcaagtgat
accagtcttgaaatcagtggagctgtgggaggcctaagtcttaccagctcgaatggactg
gtcataccagtcaatgaccttactgaaaacattgagataatgctaccaaggcttccagca
attcaggaagacaggagccttctgaatctgggcaattttagtgctttccaagtcaatatt
acatctgaaaatacatctctagtggttcacctagaacctgaacaggatattccacttgtt
ctctacttaggatatggctattgtccaaatgagactaactatgatatgaaaactcatctg
tcccctatttctgttcaagatacgtcaagtacctgggttctcagcccagaagaactcact
tttggagaagggtcttactattttttggtgaaacaagacatggaaatggattctacagcc
ggcagtgatttaactgtagcagtcacttgctttgtatcccagtgcgtattctgggatgag
cttcaggggaactggaatagctatgggtgtcatgtaggaccaaaaacaacccccatcagt
acccagtgcctttgcaaccacctcaccttctttgggagctccttctttgtcacacccaat
gccattgatgtcagcaaaacagtagagctgtttggcacttttgtggacaaccctgtggtg
gtgatgactgtgggctgtatctttttagtctatgtgctggtgcttatatgggctcgaaga
aaagacatccaggataatgccaaggtgaagatcacagtgctggaggacaatgaccgcttt
gctcagtatcgttatcttgtgacagtttttaccgggcaccgtcgaggggcagccacaact
tccaaggtgactctcaccctatatggcctggaaggagagagtgagccccaccacctaatg
gacccagacacagtggtctttgaacgtggaggagtggatgttttcctgctctgtactctg
ttccctctcggggaactgcagcgtatcaggctgtggcatgataattcaggaaatagccca
tcctggtatgtgaatcgtgtgctggtccatgacctagctcgggatgagaaatggtatttt
ctctgcaactcttggctggccattgatgttggggaatgtgtcctggacaaagtgttccca
gtagctactgaacaggacatgaagcaattcagtaacctgttcttcatgaagacctcaaag
ggcttccgcgatggacacatctggtactcaatcttcagccgttccccacggagctccttc
acacgagcccagagggtatcgtgctgcttctccctgctgctctgcactatgctgaccagc
atcatgttctggggggtgcccaaggatccagctgagcagaagatggacctaggcaaaatc
gagttcacatggcaggaggtgatgattggctttgaaagctccctcctcatgttccccatc
aacctgctcattgtgcagatcttcaggaacacccggccccggccagcacagcagcagaag
gagaagaaaccagggaaaagtggtcgagtgtctcctagtcttcctccaccccctcaagcc
atgcagagcatctcactcactccagaggctgtgataaaggatattaagagaattgccaat
tcactgttcaaaacactgaagactccactaccctcttcagaaacagtgctgggaaaatct
gctgacatcaacatgcttttggccttggtcgaggatatcatctgccagcagaaccaagct
gggcgagagttttatgatgagagtaagaagaaggatgatcctattgtcattacattaggc
tctgtggatatccaagaaaaaacaagaagtcccaccccagagaaagggatgactgaccga
ctgaaacacaacgattataaccgctacttgtacatgcagctccagcatgtagagatggag
ctggaattgctggggccttacaaatttcagaagcctcagagttacacccaggctgtaagg
caggtccagcacatgaaaagcctgctagaaagccaaatctgctcttcaggctccatcaat
gagaggtgttcccctactccaagtttctctggagatggcaagaaagtttcctcttccaaa
gggctgccatggtggtttgttttcataggctggttccttatagctgccaccagtggagtg
tctggtttcttcaccatgctctatgggctgcattatggcaaggagaactcaatcaagtgg
ctgatctccatggccatctccttctttgagagccttttcatcacccagcccttaaaagtg
ctaggatttgctgctttctttgctctggttctgaagaagatggaacaggaagatgaagag
aacacggccattgatggatcactgtctgctccaggtgactcaaatcctctgtttggagcc
cgaagggacagcagaagcaacatctaccatccccctcccatgacagacattgagaaaatg
aagaggaatcacatcaaggagcagaaagcctttgccttaatcagagagatactggcttac
ttgggatttctatggatgctgttgttggttgcctatggacagagggatcccagttcctac
tacttgaacaagcacattgagaacagctttacagatgggtttcgggatgtctacagctac
caggacttcttcacatgggcgagaactaccttagtcaacaatttgtatggttcatatcaa
gggttcattacagatggcaactccaagttggtgggtagtgcccggatccgacaagttaga
gtgaagggggacacctgtcccattgctcccaagctgcagcattcagtccaagaatgccac
gctccttactctctccagacagaagatacatcagactatggagaacgctggaatgtctca
gcctttgataactcctctgacttcagctctgcatggcagtatcagagccagtccaaactg
agaggccatcccatctggggcaagcttgccatctacaggggaggtggatatgtggttcac
ttgggcaccgaccttaagaatgcaaccagaattctccagtacctcttcagcaacatctgg
ctggatacctttacgagagcagtttttattgaatttacagtctacaatgccaatgtgaac
ctgttctgcattattagcttgatgtttgaaactaatgctttaggggcatttttcacacat
gcagagctccaaagcatccggctgtatccatacacagatggcctacacatatttgttgtt
gcagcagaagttatttatttcctatttgttgtttactacatggtaatacagggaaagctc
atgagggctctgaaatggaggtatttccacagcaagtggaacctgctagaactggccatt
atattgattagctggagcgctctatcagtgtttgtgaaccggacaatccttggggcacga
gacatcagttactatcaagagcacaaggatgagtgtgtaagcttcaatgaaactgccaca
gctgatgcagtgcttggctacctgattgctttcctagtacttctgtctacagtgaaattg
tggcatctcctgaggctcaaccctaaactcaacatgatcacttctaccctgaagagggca
tggggtgacatctctggattcatcacagttattgcaatcatgttcctggcttactctatc
gctactaatctgatatttggttggaagctgcactcttacaaaaccctcttcgattcagca
gagacaatggtcagccttcagctgggaatcttcaactatgaggaggtcttggactataat
ccagttttgggctccttcttaattggatcctgcattatttttatgacatttgtggtgctg
aacctgttcatttcagttatattggttgcttttagcgaagaacagaaatattatcaggca
tccgaagaggaagagattgttgatctaatgctgatgaaactgttcagtttccttgggatt
aagtgcaaaaaagagcagacaaccgatagtgaggaacggaaagaacttgccagcacctga
DBGET
integrated database retrieval system
