Crocodylus porosus (Australian saltwater crocodile): 109310433
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Entry
109310433 CDS
T07440
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109310433 (CTCF)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310433 (CTCF)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109310433 (CTCF)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109310433 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
109310433
NCBI-ProteinID:
XP_019391106
Ensembl:
ENSCPRG00005000477
UniProt:
A0A7M4FPJ5
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MWTEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDVCHIPPNQADGGEVVQD
VSSGVQMVMMEQLDPTLLQMKTEVMEGTVPQETEATVDDTQIITLQVVNMEEQPINIGEL
QLVQVPVPVTVPVATTSVEELQGAYENEVSKGGLQEGEPMICHTLPLPEGFQVVKVGANG
EVETLEQGELQPQEDPNWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCD
AVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFR
QKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHSDNCSGPDGAEGENGGEPNK
KGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEEEEETAVEIEAEPEVEQVAPAPPPAKKR
RGRPPGKANQPKQPQPTAIIQVEDQNTGAIENIIVEVKKEPDAETVGEEEEAQPAVVEAP
NGDLTPEMILSMMDR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagaggaaggtgaaatggaaggtgaggcagttgaggctattgtggaggagtct
gaaactttcatcaagggaaaagaaagaaaaacctatcaaagacgccgtgaaggtggacag
gaggaggatgtttgtcatatcccacctaaccaagcagatgggggtgaagtagtgcaggat
gtcagtagtggtgtgcagatggtgatgatggaacagctggatccaacactccttcaaatg
aagactgaagtaatggaaggcactgtgcctcaggaaacagaggctacagtggatgacaca
cagataataacacttcaggttgttaatatggaagaacagcctataaacattggtgagctt
cagcttgtccaagtacctgttccagtgactgtaccagttgccaccacttctgtggaagaa
cttcagggagcgtatgaaaatgaggtttcaaaaggaggcctacaagagggagagcctatg
atctgtcacacgctccctttaccagaaggtttccaggtagtgaaagtaggtgcaaatggt
gaggtggagacactggagcaaggagaacttcagccacaggaagatcccaattggcagaaa
gatccagactatcagccaccagccaaaaaaacaaagaaaaccaaaaagagcaagcttcgt
tatactgaggaaggcaaagatgtggatgtgtctgtgtacgattttgaagaggagcagcaa
gagggtttgctgtctgaggtcaatgcagaaaaggtggtgggcaacatgaagccccctaaa
ccaacaaaaataaaaaagaaaggtgtaaaaaagacattccagtgcgagctgtgcagttat
acctgtccacgtcgttccaacttggaccggcacatgaaaagccacactgatgaaaggcca
cataagtgccatctctgtggcagagctttccggacagtcacgttgctgaggaaccacctc
aacactcacacaggtactcgtcctcacaagtgcccagactgcgacatggcctttgtgacg
agtggagagttggttcggcatcgccgttacaaacacactcatgagaaaccattcaaatgt
tcaatgtgtgactatgctagtgtggaggtcagcaagttgaaacgccacattcgctctcat
actggagagcgtccattccagtgtagcttgtgcagctatgccagcagagatacttacaaa
ctgaagaggcacatgagaacccactctggagagaagccatatgaatgttacatctgtcat
gctcgctttactcagagtggcaccatgaagatgcacattttgcaaaagcacacagagaat
gtggccaaatttcattgcccccactgtgatactgtcatagcaagaaagagtgacttgggt
gtccatttgcgaaagcagcattcctacattgagcagggcaaaaaatgtcgctactgtgac
gctgtgttccatgagcgatatgctctcatccagcatcaaaagtctcacaagaatgagaaa
cgtttcaagtgtgaccagtgtgattatgcatgcagacaggagcggcacatgatcatgcac
aaacgtacccatactggagaaaagccttatgcctgtagccattgtgataaaaccttccgt
cagaaacagctccttgatatgcacttcaaacgttaccatgaccccaactttgtccctgct
gcctttgtctgttcgaagtgtggtaaaacattcactcgcaggaacaccatggctagacat
tctgataactgttctggcccagatggtgcagaaggagagaatggaggggagcctaataag
aagggtaaacgtggaagaaaaagaaagatgcgatctaagaaggaagattcatctgacagt
gaagaaaatgctgaaccagatctggatgacaatgaagaagaggaggagacagcagtagaa
attgaggctgaaccagaagtggagcaagtggcccctgcaccacctcctgctaagaaacga
aggggaaggccaccaggcaaagccaaccaaccaaagcagccccagcctacagcaatcatt
caggttgaagaccagaacactggtgcaattgaaaacattatagttgaagtaaagaaagaa
cctgatgcagaaacagtaggagaagaggaggaagctcagcctgctgtagtggaagctccc
aatggagacctcactcccgagatgattctcagcatgatggatcggtga
DBGET
integrated database retrieval system
