Crocodylus porosus (Australian saltwater crocodile): 109310452
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Entry
109310452 CDS
T07440
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109310452 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109310452 (SF3B3)
03041 Spliceosome [BR:
cpoo03041
]
109310452 (SF3B3)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310452 (SF3B3)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109310452 (SF3B3)
Spliceosome [BR:
cpoo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109310452 (SF3B3)
Complex B
109310452 (SF3B3)
Complex C
U2 SnRNP specific factors
109310452 (SF3B3)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109310452 (SF3B3)
TFTC complex
109310452 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
109310452
NCBI-ProteinID:
XP_019391139
Ensembl:
ENSCPRG00005001994
UniProt:
A0A7M4E0U6
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
SFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFTNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttacaacttaaccttgcagcgagctactggcatcagctatgccatccatggt
aatttttcaggaacaaaacaacaggaaattgttgtttcacgggggaagatcctggaattg
ctccgccctgatcctaacacagggaaggttcataccttgctgactgtggaagtatttgga
gtcattcgttccctcatggccttcaggctgacaggtggaaccaaagactacattgtggtt
ggcagtgattcagggcgcattgttatcctagagtaccaaccctccaagaatgtgtttgaa
aagattcatcaggaaacctttggcaagagtggctgtcgcagaatcgttcctggtcaatat
ttggctgtggatcccaagggtcgtgctgttatgattagtgccattgagaaacagaaactg
gtgtatattttgaacagagatgctgctgcccgtctcaccatttcttccccactggaggct
cacaaagccaacacattggtttaccatgtggtgggagtcgatgtaggatttgaaaaccca
atgtttgcttgtctggaaatggactatgaggaagcagacaatgacccaactggagaagca
gcagctaacactcagcagacactgacattttatgagttagatctgggtttaaaccatgta
gtgaggaaatacagtgagcctttggaggagcatggcaatttcctcataacagttcctggt
ggttctgatggccccagcggtgtgctgatctgttctgaaaactacatcacctacaaaaac
ttcggtgaccaacctgatatcagatgtcccattcccaggagaaggaatgacttggatgac
ccagagagaggcatgatttttgtctgctctgctacacacaaaaccaagtccatgttcttc
ttcctggcccagacagagcaaggcgacatcttcaaaatcacccttgagaccgatgaagac
atggtaacagagatccgactgaagtattttgatactgttcctgtggctgctgccatgtgt
gtgttgaaaacaggatttctctttgtggcatctgaatttggaaaccattacctgtaccaa
atagcccatctgggtgatgatgatgaggagccagagttctcctctgccatgccccttgag
gaaggagacactttctttttccagccacggcctctcaagaacctggtgctggtggatgag
ctggacagtttgtctcctatcttgtgctgtcagatagctgatctggccaatgaagacaca
ccccagttgtatgtggcctgtggtcgaggacctcggtcatctctgagggttctaaggcat
ggactcgaggtatctgaaatggccgtttcagagctgcctggtaaccccaatgctgtctgg
actgtgaggagacacgttgaagatgagtttgacgcctacattattgtgtccttcgtaaac
gccaccctggtgttgtctatcggagagactgtagaggaagtgactgactctggattcctt
ggtaccacccccactttatcctgctccttactcggggatgatgcattggtacaggtttac
ccagatggcatccggcacatccgagcagataaaagagtgaatgaatggaagacaccagga
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtggtaatagcattgactgga
ggagaactggtctattttgagatggatccgtcaggacagctgaatgagtacacagagagg
aaggagatgtcagcagatgtggtgtgcatgagtttggccaatgttcctcctggggagcag
cgctcccgcttccttgctgttgggctggtggacaacactgtcagaatcatttcccttgac
ccttcggattgcttacagccactgagcatgcaggccctccctgcacagccagaatcactg
tgtattgtggagatgggaggtacagaaaaacaggatgagctgggtgagagaggctctatt
ggcttcctgtacttgaatatcggattacagaacggtgtactattgcgaactgtcctggat
ccagtcactggggatctttctgataccagaactaggtaccttggctcacgccctgtgaaa
ctctttagagtccggatgcaaggccaagaggcggtgttggccatgtcaagtcgctcatgg
ctgagttattcctatcagtcccgttttcatctgaccccgctatcttatgagacactagaa
tttgcatctggctttgcttccgagcagtgtccagaaggcattgttgccatctccacaaat
acgctgaggattttggcactggagaagctgggtgcagttttcaaccaggttgccttccca
ttgcagtatacacccagaaaatttgttattcaccctgagagcaacaacctgatcatcatt
gagacagaccacaatgcttacacagaagctactaaggcccaaaggaagcagcaaatggct
gaggaaatggtggaggcagctggtgaagatgagagggaactggctgcggagatggcagcc
tcctttctgaacgaaaaccttccagaatccatctttggtgctcccaaggcaggcaatggg
cagtgggcttctgttatccgagttatgaaccccatccagggaaatactttggacctagtc
cagctggagcagaatgaagctgccttcagtgtggctgtgtgccgattcaccaacacgggt
gatgactggtatgtgctcgtaggagtggccaaggacctgattctgaacccccgctctgtt
gctggtgggtttgtctacacatacaagctggtgaatagtggtgagaagcttgaattcctg
cacaagacccctgtggaggaggtacctgcagccattgccccattccaaggccgagtccta
attggagttggaaaacttttacgtgtgtacgacttgggcaagaagaagctgcttcggaag
tgtgaaaataagcacattgccaactacatctgtggcatccaaaccattggacaccgagtg
attgtttcagatgtccaggagagcttcatctgggtgcgctacaaaaggaatgagaaccag
ctcatcatttttgcagatgacacctacccccgctgggtgactacagccaccctccttgac
tacgacactgtggccggagcggacaagtttggcaacatctgtgtggtgaggcttcctccc
aacactaatgacgaggtagacgaagatccaactgggaacaaggcactgtgggaccgaggc
cttcttaatggagcatcacagaaggctgaagtgataatgaattaccatgtgggggagacc
gtgctttctttacagaagaccacgctgatcccaggaggttctgaatctcttgtgtatacc
accttgtcagggggcattgggatcctggtccccttcacatcccatgaggatcatgatttc
ttccaacacgtagaaatgcatctgaggtcagagcaccctcctctctgtggacgagaccat
ctcagtttccggtcctactactttccagtgaagaatgtgattgatggggacctctgtgaa
cagttcaactccatggagcccaacaaacagaagaacgtggctgaagaactggacaggacc
ccaccagaggtgtccaagaagctggaggatatccgtacgcgctatgcgttctga
DBGET
integrated database retrieval system
