Crocodylus porosus (Australian saltwater crocodile): 109310518
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Entry
109310518 CDS
T07440
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310518 (CHD9)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109310518 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
109310518
NCBI-ProteinID:
XP_019391263
Ensembl:
ENSCPRG00005003455
UniProt:
A0A7M4E5N2
LinkDB
All DBs
Position
Unknown
AA seq
2893 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDTLNHVQDTQ
AQQKMSEFEQLNQYDSLKLHQVNQSFNSPADSVLSPHSQFSCSPIHPPNQSNGMFPDVAD
GSPMWGHQTATAIPNQNGSPFHPGHSQTMQQNKSFVAHHDFALFQANEQQHQCASLRSQQ
SRNNANAGQDTLSQPKNFMEVNVSASHRVNVTHPPPVANPSASQQPLSVKPFSQTATASI
HFCGNQEGNFDGQSPSMTSCPVNNTQQFSYSYSNNHISSTGLLQSSTTLSSSQRTHPLSD
FTGSDAFTSRTGTKQETTEHLLNPNTPLNSNSFQMLHSAHPQGNFSSSKLSPVNISFPAS
TGSSQINHFSDPIESNGFSSLDENLLHQVESQGEPFTGLDPEDLLQEDLLPQFDDSAFVQ
DSASHVLEHDLEHHVTPQQVTQSSDIARTQSQQSHMHPWHSSVSNQHVHCRNRVTLQGQP
PSSKKTDGSGAYTKLQNTQVRAMSEKKQKKKVESESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKIKSKPKDKESKKPRTGSSSKIKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRSFKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRIVKKEVSAGVTVEAEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSF
CEDKDTGEPVVYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGMRGPFLIIAPLSTITNWEREFRTWTDINVVVYHGSMVSRQMIQQYEMYFRDSQGRII
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFRETYSPTAPDFHLQAMIHSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEPESEGDEKPKLRRPCDRSSGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNDFQKVFDGADASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDMEDDVSSPGDLVIADGDGPMMEGDKIYWPTQSALTTRLRRLITAYQRTNKNRQTQQ
IQPAFPVQASVMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPGIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYSQNKVVLSRTSTPLLHQYQMALSASPLASQARLPDAKGNALE
DTKAKNENLKEEPHSSEEESMSTEEIRTGMKSESLSPKNGTPSQITNHKPSAKAETDRRM
VAARTEPLTPNPSSKKQRLNKRGSETSSDSDSDSDRSSCSSRSSSSSSSSSSSCSRSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEAQKRAEGTPHMKAYDEESVAS
LSTTQDETQDSFQLNNGTQNSTYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPS
ARRSYDNNTVASFYTTKLLDSPGAAADYSEPSVPTPPSAGVKEERDQSPQMSKVKKHVRE
KEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGTLGQQQYLARLRELQNASETSLVNFPK
SLPDSGTSNLLTASANGVIADSQPVVKKRRGRRKNVEGVDILFINRNKQPNHVSPGINTS
QIAPGINPTLTFAQSQSLLDEESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPSYVED
LGAFIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKD
LCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKAT
ATAAAAATTATNISVNPFLANGLLPGVDLPTLQALQQNLQNLQSLQVTAGLMGMPAGLTT
GGEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESVSEDKKGSDSKEADGKKERTESQ
NKDNCGENSVSSSPSTSSAAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIF
DVQNSENNDTGSAKPTEEKEENSRIRDQEDKGGTEPNSHNENSTDEGSEKADASSGSDST
SSSSEDSDSSDED
NT seq
8682 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaacctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgtacaacctgggcctgtttcactggttgatgaactgaat
ttgggtgcagaatttgagcctttgcacatagacacattgaatcatgtgcaagatactcaa
gctcaacagaagatgagtgaatttgagcagctaaatcagtacgattcactgaaacttcac
caagtaaatcagtcattcaacagcccagctgacagtgtcttatcaccacactctcaattc
agttgctcaccaatccatccaccaaaccaatccaatgggatgtttcctgatgttgcagat
ggtagtcctatgtggggtcatcaaactgccacagctattccaaatcaaaatggatcccct
tttcacccaggacattctcagactatgcagcaaaataaaagctttgtagcacaccatgat
tttgccttatttcaggccaatgaacagcagcatcagtgtgcctcactacgttcgcaacaa
agcagaaacaatgctaacgcagggcaagacactctgagtcagccaaaaaacttcatggag
gttaatgtgtctgcttcacacagggtcaatgttacccacccacctccagttgctaatcca
tcagcttcacaacagcctctttctgttaaaccattttctcagactgcaactgcttcaata
catttctgtggaaatcaagagggaaattttgatggacagtccccatccatgacttcttgt
ccagtcaataatacccagcagttttcttattcctactctaacaaccacatttcttctacc
ggccttctgcagtcttctacaactctttctagtagccaacgaacacatcctttatctgat
tttactggaagtgatgcctttacatctcgaacagggaccaaacaagaaaccaccgagcac
ttgttgaatcctaacacacccttaaattcaaatagtttccaaatgttgcattcagcgcat
cctcagggcaacttcagtagttcaaaactctctcctgtgaacattagttttccagcttct
actggttcttctcaaataaaccatttcagtgatcctatagaaagcaatggtttttcatct
ttggatgagaatttacttcatcaagttgaatctcaaggcgaaccatttacagggcttgat
ccagaggacctcctccaggaagatctccttccccagtttgatgattcagcatttgttcag
gacagtgcaagccacgtattagaacatgacctagaacaccacgttactccacagcaagta
acacagtcatctgatattgctcggacacagtcgcaacaaagtcatatgcatccttggcat
tcttcagtttctaatcagcatgttcactgcagaaatcgtgtaaccttgcaaggacagcct
ccttcctcgaagaaaaccgatggttcaggagcttatactaaattgcagaatacccaggtg
agggcaatgtctgaaaagaaacagaagaaaaaagtggagtctgaaagtaagcaagagaag
gctaatcgcataatatcagaggcaattgcaaaagcaaaagagagaggggagagaaatatt
ccacgagtgatgagtcctgagaatttccccagtgtttcagctgaaggaaaagaagaaaag
aaaggtagaaaaattaaatccaaaccaaaggacaaggagagcaaaaaacctagaactggc
tcctcatccaaaattaaagagaaaacaaaaataggcaaacttattatcacattgggtaaa
aaacaaaagagaaaaaatgagtcttcagatgaactgtccgatgccaagcagactccacag
aggtcattcaaagatgaggactcacagaaaagaagatcgaatcgtcaagttaaaaggaaa
aagtatgctgaagaaggagaaggaaaacagtcagaggaagaagctaaagtttctgtgaaa
atcaaaaagaattctgctcctttgcctgctgaacaacccttacaattatttgtggagaat
ccaagtgaagaggatgcagcaattgtagacaaaattttatcttcaaggatagtaaagaaa
gaagtatcagctggagtgactgtggaagcagaagaattctttgtgaaatacaagaattac
tcttacctccactgtgaatgggccacagaacaacagcttttgaaggataaaagaatccag
caaaaaatcaaacggttcaagctgaggcaggcacaaagagctcacttttttgcagatatg
gaggaagaaccttttaatcctgattatgttgaagtagaccgggtattagaagtctccttt
tgtgaagataaggatactggggaacctgttgtttactatttagtaaagtggtgttcatta
ccatatgaagatagcacatgggagctgaaagaagatgtagatcaagcaaaaatagaagag
tttgaacaattgcaagcttccaggcctgactcaaggcgactggaccgacctcctccgaac
tcttggaagaagatagaacattctagggaatataaaaatggcaatcagctcagggaatac
caactggaaggactcaattggctcctgttcaactggtacaataggagaaactgcatttta
gcagatgaaatgggccttggcaaaaccattcagtcaattacattcctctatgaaatcctc
ctgactggtatgcgtgggcctttcttaatcatagctccactttccactataactaattgg
gaaagagaatttcgtacgtggactgatattaatgttgtggtgtatcatgggagcatggtt
agccggcagatgatacagcagtacgaaatgtacttcagagactcgcaggggcgtatcatt
cgaggtacatacagattccaagccattatcaccacttttgaaatgattcttggtggctgt
ccagaactcaatgcaattgaatggcgttgtgttattattgatgaagcacacaggctaaag
aacaaaaattgcaaactcttggaaggactaaaactcatgaatcttgagcacaaagtgctg
ctgacaggcacaccgctgcagaacacagttgaagaattatttagtctccttcattttctt
gaacctttgcgttttcctgctgaatctacattcatgcaggaatttggggatcttaaaaca
gaggagcaggtgcagaaactacaagctattctgaaaccaatgatgctgagacgtttaaaa
gaagatgtagagaaaaagttggcacccaaggaagaaactataattgaagtagaactaact
aatatccagaagaaatattatcgtgcaattttggagaagaattttgcttttttgtctaaa
ggagcaggccaagctaacgtacctaatctagttaacactatgatggaactcagaaagtgc
tgcaatcatccttatctcatcaaaggtgctgaagagaaaatccttggagagtttagagag
acatatagtccaactgcacctgacttccacctacaagcaatgatccactctgctggtaaa
ttggttctcattgataaacttcttccaaaaatgaaagcaggaggccataaggtgcttatc
ttctctcaaatggttcgctgccttgacattctggaggactatcttatacataagagatac
ttatatgaacgaatagatggaagagtaagagggaatctgaggcaagctgctatcgatcga
tttagcaaaccagactctgatcggttcgtgttccttctgtgtaccagagctggtggactg
ggcattaatttgactgcagctgatacatgtattatttttgattctgactggaatcctcag
aatgatctgcaggcccaagcacgttgccacaggattggtcagaacaaagcagtgaaagtc
tacagattgataactcgaaactcatatgagagggaaatgtttgacagagcaagtctgaag
ttgggtttggataaagctgtcctacagagcatgagtggaagagaaaatagcgttggtggt
attcagcaactttccaaaaaagaaatagaagatctgctacgaagaggtgcctatggtgct
attatggatgaagaagatgagggctctaaattctgtgaagaagatattgaccaaattttg
caacgtcgtacaaaaactataacaattgaatcggaaggaaggggttcaacatttgctaaa
gctagttttgttgcatctggaaacaggactgatatatccttagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatagaagccatcagtggtagaaacagcctg
gttattgatactccaagaattaggaagcaaacaaggccgtttagtgctacaaaagatgag
ctggctgaattatcagaaccagagagcgaaggagatgaaaagccaaaactccgcagacct
tgtgatcgttccagtggatatggaagaacggagtgctttcgagtggaaaagaacttactg
gtctatgggtggggtcgatggagagaaattttgtcacatggtcgcttcaagagacagcta
aacgaacaagatgtggagataatttgtcgagccctcttagcatattgccttgttcactac
agaggagatgaaaaaataaaaagttttatatgggatctcatcactccaacagaggatggg
caaacacgtgagctacagaatcacttaggtttgtcagcccctgtacccagaggtcgaaaa
ggaaagaaagtaaagactcaggccagcacttttgatatacataaagcagaatggcttcga
aaatataatccagagcatctacttcaagatgaaggatataaaaagcacataaagcaccac
tgcaacaaagtcttgctacgagtaaggatgctgtattatttaaaacaagaagtcattgga
aatgatttccaaaaagtttttgatggagctgatgccagtgaaattgatgtttgggtccct
gagccagaccactctgaagtcccagcagaatggtgggatgcagatgcagataaatccctc
ttaattggagtttttaagcatggttatgagaagtacaacactatcagagcagacccagcc
ctgtgcttcttggaaagggtgggcaaaccagatgaaaaagcagttgctgctgaacagcga
gcaaatgattacattgatggggatgtagaagatccagaatataaaccagccccagcaatg
tttaaagatgatatggaggatgatgtttcatcaccaggtgatcttgtgatagcagatgga
gatggtccaatgatggaaggagacaaaatttattggcccacccagtctgccctaacaaca
cgtctgcgtcgcctaataacagcctatcaacgtactaataaaaataggcagacacagcag
atccagccagcattcccagttcaagccagtgtgatgcagcctccatatgaagaagctgct
ctaaatccaaaaatggctgctaagattgaaagacaacaaagatggacaagaagagaagaa
gctgatttttacagagttgtgtctacatttggagtggtgtttgatcctgacagaggccga
ttcgattggacaaaatttagagctatggctaggctacataagaaaactgatgagagtttg
gaaaagtacttatatgcatttatgtctatgtgcagaagagtctgtcgtctcccctcaaaa
gaagaactggtagatccaggcatttttatccagcccattacagaggaacgtgcttcacga
accttatatcgcattgagcttctaaggaaagtacgagaacaggcgctccgacatccacag
ttgtttgaacgattaaaactttgccagccaaatccagatttaccagtctggtgggagtgt
gggactcatgaccgggatttgcttattggagctgctaagcacggggttagcaggacagac
tatcacattcttcgtgatcctgaactctcatttatgtctgcccagaggaactacagtcag
aacaaagtggtattatcgaggacttctactccacttttgcatcagtatcagatggcattg
tcagcttctcctcttgcatctcaggcaagattaccagatgctaaagggaatgctcttgag
gatacaaaagctaaaaatgaaaacctgaaagaagaacctcactcttctgaagaggaatct
atgtctacagaggagatacggacagggatgaaatctgaatctttgagcccaaagaatggc
acaccatcacagattacaaaccataaacctagtgcgaaggctgaaactgataggcgcatg
gtcgcagcaaggacagagcccctaactccaaacccttcttccaaaaaacagagactcaac
aaaagaggatcagaaactagttctgattcagactctgattcagaccgatcatcctgttct
tccaggtcatcttcatcctcctcttcctcgtcttcatcttgttcacgctctcgatcagga
tccagctcttcatcgtcatcatcttgttcctcagcatcgtcgtcgtcatcatcatcctct
tcttcctcttcgtcatcctcatcatcttcctctgaagagagtgacagtgatgaagaagca
cagaagagagcagaaggaacccctcacatgaaagcatatgatgaagagagtgtagcgtct
ctgagcactacacaagatgagacccaggacagtttccagttgaacaatgggacacaaaat
tccacttatctcttgcaaggtggatacatgttggctgcctcctattggccaaaggatcga
gttatgattaaccggctagacagtatttgtcaaacagtattgaaaggtaaatggccttca
gcaagaagaagttatgacaacaatacggtggcatctttctatacaaccaaacttctggac
agcccgggtgcagctgcagactacagtgaacccagtgtaccaacacccccaagtgcaggt
gttaaagaagaacgtgatcagtcaccacagatgtcaaaggtgaagaagcatgtacgagaa
aaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaagcag
gggctttctcagaaaaggccatttgagagcgaagaaggcacgttaggacagcagcaatac
ctggctcggcttcgtgaactccagaatgcgtcagagaccagccttgtcaatttccctaaa
tccttgccagattcaggtacttccaatctgttaacagctagtgctaatggagtaatagct
gacagccagcctgtagtgaaaaagaggagaggaaggaggaagaatgtggagggtgttgat
atcctctttataaacagaaataaacaacctaatcacgttagtccaggaattaacacctct
caaattgctccaggaataaacccaacacttacatttgcccagtcccaaagtttacttgat
gaagaaagtccagttcctgttattaacctgaaggatgggacaaggcttgcaggtgatgat
gcaccaaaaaggaaggatttagaaaaatggctcaaggaacatcctagctatgttgaagat
ttaggagcttttattcctcgaatgcagcttcatgatgggaggcccaaacaaaagagacat
cgttgtcgaaaccctaataaattggatgttaacagtctcactggtgaagaacgtgttcag
ctgatcaatagaagaaatgctagaaaggtgggaggtgcttttgccccaccattgaaggat
ttatgcagattcttaaaagaaaatccagaatatggagtagctcctgagtggggagaggtt
gtaaaacaatctgggtttcttccggaaggtatgttcgatcgtattctcactgggcctgta
gtgcgagaagaagtaagcaggaggggaaggcggcctaaaagcgagattgccaaggcaaca
gcaacagcagcagcagcagctacaacagcaacaaatatatctgtcaaccctttcctagcc
aatggattacttccaggagtggatctacctactcttcaggccttgcaacaaaacctgcaa
aacttacaatcactgcaagtaactgcaggattaatgggaatgcctgctggcctaactact
ggaggagaagctaagaacatggctgctatgttccccatgctactgtcagggatggctgga
ttaccaaatttgctgggtatgggaggacttctaactaaatctacagaatctgtgtcagag
gataaaaagggaagtgactcaaaggaggcagatggcaagaaagaaaggacagaaagccaa
aacaaagacaattgtggagaaaactctgtatcaagctctccttcaacatcctctgctgct
gcagctgccaacccattagctcttaaccccttacttttgtccaatatactttatccaggg
atgcttctcactccaggccttaatctccatatcccagctttgtcccaatctaatattttt
gatgtacagaacagtgaaaacaatgacacaggctcagccaagcctacagaggaaaaggag
gaaaattctaggattagagatcaggaagacaaagggggaacagagccaaactctcataat
gaaaacagcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtaca
tcgtcttcatctgaggattcggattctagtgatgaagactga
DBGET
integrated database retrieval system
