Crocodylus porosus (Australian saltwater crocodile): 109310956
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Entry
109310956 CDS
T07440
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109310956 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpoo01001
]
109310956 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109310956 (TAF1)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109310956 (TAF1)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
109310956 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109310956 (TAF1)
Protein kinases [BR:
cpoo01001
]
Serine/threonine kinases: Other
TAF1 family
109310956 (TAF1)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109310956 (TAF1)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
109310956 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
109310956
NCBI-ProteinID:
XP_019391882
Ensembl:
ENSCPRG00005001070
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MSDSESDEEAEGGAGPFSLAGFLFGNINEAGQLEGDSVLDKECKKHLAGLGALGLGSLIT
ELTASEEDGSEADGPQLDEEGWVKSTEDAVDYSDISEMAEDESRRFRQAMGNLQPSRRPD
EDEDDYDADCEDIDSKLMPPPPPPPVPVKKEEEKDAVAPASEERDGIILPSIIASSSAAS
EKVDFSSSSDSESEMGPQEARQTESKEGKLTLPLAGIMQRDATKQLPSVTELFPEFRPGK
VLRFLRLFGPGKNVPSVWRSARRKRKKKHRELTQEVQIQEGEATAEAGAEGKSPWEYEFA
PPPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPAQLWYDMLGIPE
DGSGFDYGFKLKDRKKDQETKGQGGEQDAGLMLEKDDLLADEHFLMVTQLQWEDDVIWNG
EDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPIPLSQKPSIAGVLG
IAKSKEKQPPEQQVTLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETCLDPPVLTL
DPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVK
DPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKK
YSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAE
YSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQA
FENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLFEVPGPNSKRANTH
IRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWW
VLKPDFRLPTEEEIRAMVSPEQCCAYYSMISAEQRLKDAGYGEKSFFAPEEENEEDFQMK
IDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKQDDKEP
QPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGE
GPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMG
KNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKERSKKDRRDKKGLSSASGT
SAGSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYCRIRTT
KDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDL
KLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEG
TKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTD
PMVTLSSILEGIINDMRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYP
SREEFREHVELIVKNSAMYNGPKHSLTQISQSMLDLCDEKLREKEDKLARLEKAINPLLD
DDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKH
KYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDIST
AKEAALEEADLESLDPMTPGPYTPQPPDLYDTNTSLSMSRDASVYQDESNLSAMDTPTTT
PEKRGAQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSAQQP
QASVLYEDLLMSDGEDDDDDDGSDEEGDNPFSSIQLSESGSDSDVESNAVRPKQPHVLQE
NTRMGMDNEESMMSYEGDAGETSHVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEVSE
EEEEEEEEQRCGPSVLSQVHLSEDEEDSEEFHSIAGDSDLDSDE
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgacgaggaggcggagggcggcgccgggcccttctccctggcc
ggcttcctcttcgggaatatcaacgaggcggggcagcttgagggcgacagcgtcctcgac
aaggaatgtaagaagcacttggccgggctgggcgcgctggggctgggcagtctcatcacg
gagctcacggccagcgaggaggacggcagcgaggcggacgggccgcagctggacgaggaa
ggctgggttaagagcacagaggatgccgtcgattactctgatatcagcgagatggcggaa
gatgagagccgcagattcaggcaggcaatgggcaacctgcagccgagtcggagaccagat
gaagatgaggatgattatgatgcagattgtgaagatattgattccaagctgatgccacca
ccaccaccccctccagtgccagtaaagaaagaagaggagaaggatgcagttgctcctgca
tctgaggaaagagatggcataattctgccctccatcattgcttcttcctctgctgcctct
gagaaggtggattttagcagcagctctgattccgagtcagagatgggaccccaagaggcc
aggcagacagaatccaaggaaggcaaactcactctgcctcttgcaggaatcatgcagcgg
gatgccaccaaacagttgccaagcgttactgagcttttccctgaattccggccaggcaag
gtgctgcgtttccttcgcctctttggccctgggaagaatgttccatctgtttggcgtagt
gctcgccggaaacgcaagaagaagcaccgggagctaactcaagaagtgcagatccaggag
ggtgaagccacggctgaggcaggagcagaaggaaagtcaccctgggaatatgagtttgct
cctcctcctcctcctgagcagtgcctttcagatgatgagatcactatgatggcacctgtg
gagtccaagttttcccagtcaacgggcgatatagacaaagtgactgatacgaagcccaag
gtggctgaatggcgttatgggcctgcccagctctggtatgacatgttggggatcccagag
gacggcagcgggtttgactatggtttcaaactaaaagacagaaagaaggaccaggagact
aaaggacagggtggtgagcaggatgcagggttgatgctggagaaggatgacctactggct
gatgagcacttcctcatggtgacacagctgcagtgggaggatgatgtgatctggaacggg
gaggacgtcaagcacaaagggactaagacacagcgagcaagcctggcaggctggctgcca
tccagcatgaccaggaatgccactgcctacaatgcccagcaaggcctgaaccgtagtggc
tctttgctcaatccacccattccactttcacagaaacccagcattgcaggggttctgggc
atcgcaaagagcaaagagaagcagccccctgagcaacaagttactctagatgaagataaa
ccctggtactccattttccctattgataatgaggagttggtatatggccgctgggaagac
aatatcatttgggatgatcaggcaatggaaacatgcttggatcctccagtattgacgctt
gatccgaatgatgagaacatcatcctggaaattcctgatgaaaaggaagagatgactttg
aattcaccctccaaggagaacaagaaggaatcttctttgaagaagagtcggatcctgttg
gggaaaacaggtgtcatcaaggaagaaccacaacagaatatgtctcagccggaggtgaag
gatccctggaacctctccaatgatgagttttactatcccaaacagcagggccttcgagga
acttttggaggcaatatcatccagcattctatccctgcagtggaacttcgccagccattc
ttccccactcatatgggtcctatgaagcttcgacaatttcatcgccctccactgaaaaaa
tactcttttggggccttgtcccagccaggaccccatgctgtgcaaccactgctgaaacat
attaagaagaaagccaagatgagagagcaggaacggcaggcttcaggaggcggcgagatg
tttttcatgcgcacaccgcaggacttgactggcaaggatggtgacctcattctggctgag
tacagtgaggaaaatgcccctttaatgatgcaggttggcatggcaacaaagataaagaat
tactacaaacgaaaacctggcaaggatcctggagccccagactgcaaatatggagagact
gtttactgtcacacatctcccttcctgggatccctgcacccaggccagttactgcaggca
tttgaaaacaacctctttcgggctcctatctatctgcataagatgccagaaactgatttc
ctcataattcggacccgacaaggctattacgttcgggaactggtggacatctttgttgtt
ggtcaggagtgccctctttttgaagttccaggtcctaactctaaacgggctaatactcac
atcagagattttcttcaggttttcatttatcgcttattctggaagagcagagaccggcct
cgaagaattcgcatggaagatatcaaaaaggcatttccttctcactctgagagcagcatt
cgaaagcgattgaaactctgtgctgacttcaaacgtacagggatggactcaaattggtgg
gtgttgaaaccagacttcagattaccaacagaggaggagatcagagcaatggtgtcaccg
gaacagtgctgtgcctattacagcatgatttcagcagagcagcgactgaaagatgctggt
tatggcgaaaaatccttctttgccccagaggaagagaatgaagaggactttcagatgaag
attgatgatgaggtgcgcacagctccttggaacaccacgcgagccttcattgctgcgatg
aaggggaagtgtcttttggaagtgactggggtagcagatcctacagggtgtggtgaagga
ttctcttatgtaaagatcccaaacaagccaacccaacagaagcaggatgataaggagcca
caaccagtgaagaagacggtgacagggacagatgctgatctccggcgtctttctctgaaa
aatgccaaacagctcttgcgtaaatttggagttcctgaagaagagattaagaagctgtcc
cgttgggaagtgattgatgtggtgcgcacaatgtccacagagcaggctcgctcaggggag
gggcctatgagtaaatttgcccgtggatctcggttctcagtggcagaacatcaggagaga
tacaaggaggagtgtcagcgtatctttgacttgcagaataaagttttggaatcaactgag
atcttatcaacagacacggatagcagctcagctgaggacagtgactttgaggagatggga
aagaatattgagaatatgttacagaacaagaaaacaagttcacagctgtcccgagagaga
gaggagcaagagaggaaggagttgcagaggatgcttctgggagaagacagcggcaatgac
aaggagaggagcaaaaaggataggagagacaaaaaaggattgtcatcggcttcaggcact
tcagcaggctctcacaaagatgatgataccgcttcagtaaccagtctcaactcctctgcc
actggccgtcggctcaaaatctatcgcacgttccgagatgaagatgggaaagaatacgtg
cggtgtgagacggttcggaagccctctgtcattgatgcctactgccggatacggactacc
aaagatgaagagttcatacggaaatttgccctttttgatgagcagcaccgggaggaaatg
cggaaggagcgacgcaggatccaagagcagctgcgccggctcaaacgaaatcaggaaaag
gaaaaactcaaaggtcccccagagaagaagcccaagaagatgaaggagcggccagatctg
aagttgaaatgtggagcttgtggtgcgattgggcacatgaggactaataaattctgtcca
ctctactaccaaacaaacgctccaccctccaaccccgttgccatgacagaggagcaggaa
gaggagctggaaaagacagtcatccacaatgacaatgaagagctcatcaaagtggagggg
accaaaattgtcctgggaaagcaactgattgagagtgcagatgaggttcgcagaaaatct
ttggtcttgaagttccctaaacagcagcttcctccaaagaagaagcggcgagtaggaacc
actgttcactgtgattacttgaatcggcctcacaagtctatccatcggcgacgaacagac
cccatggtaactctgtcgtctatcctggaaggcatcatcaatgacatgagggatcttccc
aatacgtacccctttcacacacccgttaacccaaaagttgtcaaagattactacaagatc
atcacacggccaatggatctacagaccctgcgtgagaatgtccgcaagcgccagtatcca
tcccgggaagagtttcgagaacacgtggaactgattgtgaagaatagtgccatgtacaat
ggaccaaagcactcactgacccagatatctcaatccatgctggacctctgtgatgaaaaa
ctgcgagagaaagaagataaactggctcgtttagagaaagcaattaatcccctcctggat
gatgatgaccaagtggccttttccttcattttggataacattgtcactcagaagatgatg
gcagttccagattcttggccatttcatcatccagttaataaaaagtttgttccagattat
tataaggtgattgccaatccaatggatttggagactattcgaaagaatatttccaagcac
aagtatcagaacagagagacctttctggatgatgttaacctcattcttgccaacagcatt
aagtataatggacctgacagtcagtacacaaaaacggctcaggaaatagtgaacatctgt
taccagacgctggctgagtatgatgagcacttgacacagctggaaagagacatctctact
gctaaagaagcagcactggaggaggcagatttagaaagtcttgaccctatgactcccggt
ccctacacacctcagccaccagacttgtatgataccaacacttccctcagtatgtcacgt
gatgcttctgtctatcaagatgagagcaatttgtctgctatggatactcctaccactacc
ccagagaagcggggagcccagatgcgccagggacgaggtaggctgggcgaggaagactct
gacgtagatattgaagggtttgatgaggatgatgatgggaaacctaagactccagcccca
gaagttgaagatgcagatggtgaccttgctgatgaagaagaaggctcagctcagcagcct
caggccagcgttctatatgaagatctgctcatgtcagatggagaagatgatgatgatgat
gatgggagtgacgaagaaggcgataatcctttctcatctatccagctaagtgagagtggc
agcgattcggacgtggagtccaatgcagtgaggcccaagcagcctcatgtcctccaagag
aacacacgtatgggcatggacaatgaagaaagtatgatgtcctatgagggagatgctggg
gagacatctcatgtgatggaggacagtaatatcagttatggcagctatgaggaaccagat
ccaaagtctaacacacgagataccagttttagcagcattggaggctatgaagtctcggaa
gaggaggaagaagaggaggaagaacagcgttgtgggcccagtgtgctaagccaggttcat
ctgtctgaggatgaggaggacagtgaggaatttcattccattgcaggagacagtgacctg
gactcagatgaatga
DBGET
integrated database retrieval system
