Crocodylus porosus (Australian saltwater crocodile): 109310995
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Entry
109310995 CDS
T07440
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109310995 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109310995 (CNOT10)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109310995 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_14
TPR_12
TPR_19
TPR_8
ANAPC3
ARM_TT21
TPR_17
TPR_7
DUF6058
TPR_MalT
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
109310995
NCBI-ProteinID:
XP_019391945
Ensembl:
ENSCPRG00005004892
UniProt:
A0A7M4EA98
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MAADKAGDQGTEKHEGATTTSGISDQEKELSNNALQAFVAGNYEVCLQHLNTLQDINKDD
YKITLNTAVTEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAERALHLLAVLEKMIS
QGNNNSKNGKNETGNNAAKESSNHRTESGALIEAAKSKIHQYKVRAYIQMKSLKACKREI
KSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNL
GCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSTDPGKKFSGRPMCTLLTNKRYELLY
NCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRLAECCIAANKGTSEQETKGLPSKKG
IVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQES
KQENGSKTSNQLGGNAENSESSEACSTKSHEGDKFIPAPPSSPLRKQELENLRCSILACS
AYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENV
TDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEY
DKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMR
KKPVFQPVHPIQPIQMPAFTTVQRK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggacaaggctggtgatcagggaactgagaaacatgaaggagccactactact
tctggaatttctgatcaggaaaaggagttgtcaaataacgcactacaggcttttgtggct
ggaaattatgaagtttgtctacaacaccttaacactctgcaagatataaataaagatgac
tacaaaataactttaaatactgctgtgacagagttctgtaaaagtaaccagactacaacg
gataacttgaggcaaacacttaaccaattgaagaatcaggttcattcagctgttgaagaa
atggatggattagatgatgttgaaaatagcatgctctactacaatcaagctgttattctg
tatcatcttcgtcagtatactgaagccatatcagttggagagaagctctatcagttcata
gaaccttttgaagaaaagtttgcccaggctgtttgctttctccttgttgatttgtatctg
ctaacttaccaagctgagagagctttacatttgcttgctgttctagaaaaaatgatttca
cagggcaataacaacagcaagaatggaaaaaatgagacaggtaacaacgcagctaaggag
tcatctaatcatagaactgaaagtggagctttaatagaggctgcaaaatctaagatacat
cagtacaaagtgagagcctatatccagatgaagtctctaaaagcatgtaaaagggagatc
aagtcagttatgaatactgctggaaattctgctccttcactctttcttaagagtaatttt
gaatatctgaggggcaattatcggaaagcagtaaaactgttaaacagtgcaaacattgct
gagcatccaggattcatgaaaacaggcgagtgcttaaggtgcatgttctggaacaacctt
ggctgcatccattttgcaatgggaaagcacaacttaggaattttctactttaaaaaggcc
ctgcaggaaaatgataatgcatgtgcacaactaggaacgggtagcacagatccaggcaag
aaattttccgggagacctatgtgtacgctgctgactaacaaacggtatgagctgctgtat
aattgtggaattcagcttttacatattgggaggcccttagctgcttttgaatgcctgata
gaagctgtccaggtttatcactcaaacccacgcctttggttgagactagcagaatgctgc
attgctgccaataaggggacatcagagcaagaaacaaagggtcttccaagcaaaaaggga
attgtgcaatccatagtaggtcaaggctatcaccgtaaaatagtcctagcatcccagtcc
atacagaatgttgtttataatgatggccagtcctcagctatccccgtagccagcatggag
tttgcagcaatttgtctaagaaatgccttgctgttgctgcccgaagatcagcaggagtca
aagcaggaaaatggatctaaaactagtaaccagttgggggggaatgcagagaacagtgaa
agcagtgaagcatgcagcactaaaagtcatgaaggagataaattcattccagctccacct
tcttcacctctgaggaaacaggagttagaaaatttgaggtgctcaatacttgcctgcagt
gcttatgttgctcttgctttgggtgataaccttatggctttgaatcatgcagataagctt
cttcaacagccaaagctgtcaggatctcttaagtttcttggccatttgtatgcagcagag
gcgctcatctccttggacagaatctctgatgccattactcacttgaaccctgagaacgtc
actgatgtttccctggggatctcttcaaatgagcaggatcaagggtctgacaaaggagaa
aatgaggcaatggagtcttctggcaagcagacacctcagtgttatcccagttcagttact
tctgcacgaacaatgatgttgtttaaccttggcagtgcctattgcttgcgaagtgaatat
gacaaagctcgcaagtgcctccatcaggctgcttcactaattcatcctaaagagatccct
cctgaggctattttgctggctgtgtatcttgaattacaaaatggtaacacacagctggca
ctgcagatcatcaaaagaaaccagcttctcccttctgtgaagacactctctgacatgaga
aagaagccagtattccagccagttcatcctatccagcccattcagatgccagcttttacc
actgttcaaaggaagtga
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