Crocodylus porosus (Australian saltwater crocodile): 109311025
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Entry
109311025 CDS
T07440
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109311025 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109311025 (CSTF2)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
109311025 (CSTF2)
U7-dependent histone pre-mRNA processing factors
109311025 (CSTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
109311025
NCBI-ProteinID:
XP_019392001
Ensembl:
ENSCPRG00005009730
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MAGLAVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQPVPGPGPGPGPNAQMNQQTPTSSQPQTIGGMHVN
GAPPLMQPPMQGGVPAAGQMPTSVQGPGPGPGPGPGPMAPGGGMQPQVGMPGGGPVPMER
GQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTL
LSVTGEVEPRGYLGPPHQGPPMHHMPGHDNRGPPHEMRGGPMGEPRPLMGEPRGPLMDAR
GGRDPRGMEPRGMEPRGMEPRGMDARGMEPRGMEPRGMEPRGMEPRAMEPRGPGPNPRGP
MPGGIQGPGPLNMGANVPQGPRQVPNMPGAGMQGGGLPGAGVQGAGQPGGFSPGQNQVTP
QDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggcggtgcgggaccccgcagtggaccgctctctgcgctccgtcttcgtg
gggaatatcccatatgaagccacagaggagcagctgaaggacattttctcagaggttgga
cctgttgtcagctttaggctggtatatgacagagagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaggagacagcgctcagcgccatgcgcaacctgaatggacgt
gagttcagtgggagagcattgcgagtggacaatgcagctagtgagaagaacaaggaagag
ctgaagagcctgggcacaggtgcccccatcatagagtcaccttatggggacccagtaaat
cctgaagatgcccctgagtccatcagcagggcagttgccagcttgccaccagagcagatg
tttgagctgatgaagcaaatgaagttatgtgtccagaacagccctcaggaagcccgaaat
atgctgctccaaaaccctcagctggcttatgccctgctgcaagcccaggtggtgatgagg
attgttgatccagagatcgctctgaaaattctgcatcgccagaccagtgttccacctctg
attccaggcaaccagcagccagttccagggcctgggcccgggcccggtccaaatgcacag
atgaaccaacagactcccacgtcctcccagccacagaccattggtggcatgcatgtgaat
ggagcccctcctctgatgcagcctcctatgcagggtggagtgccagccgcaggacagatg
ccaacctcagtacagggcccaggccctggccctggccctggccctggccccatggctcca
ggaggtggaatgcagcctcaggtcgggatgccaggtggtggacctgtccccatggaacgt
ggacaagggaacctgcagctctcgcccgtgggacctgccaggcctgcctctatcgagcgt
gttcaagtgcctatgccagatccaagggcccctatgcagcgtggaccattgcctgctagt
ggcccaccaccccgagggcttctgggagatgctccaaatgacccacgaggagggaccttg
ctctcagtcactggagaagtggagcccagaggttaccttgggccaccccaccaggggcca
cctatgcaccacatgcctggccatgacaaccgtggtccgcctcatgagatgaggggagga
ccaatgggtgaaccaagaccactgatgggagaacctcgggggccactgatggatgctcga
ggtggaagagatccccggggcatggagcccaggggcatggaacctcggggaatggagcct
aggggcatggatgcaagaggcatggagcccaggggcatggagcccaggggcatggagccc
aggggcatggagcccagagcgatggaacctaggggccctggccccaatccaagagggcca
atgcctggtggcattcaaggtcctggaccactgaacatgggagcaaatgtcccacagggg
cctagacaggttcccaacatgccgggggcaggcatgcaaggtggaggcctgccaggggca
ggggttcaaggagcaggtcaaccaggaggctttagccctggccaaaaccaagtcacccct
caagatcatgagaaggctgccctgatcatgcaagtcctccagctgactgcagaccagatt
gccatgctgccgccagagcaaaggcagagcatccttattctaaaagagcagatccagaaa
tccactggggcaccgtga
DBGET
integrated database retrieval system
