Crocodylus porosus (Australian saltwater crocodile): 109311032
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Entry
109311032 CDS
T07440
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109311032 (PCDH19)
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109311032 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
109311032
NCBI-ProteinID:
XP_019392009
Ensembl:
ENSCPRG00005009823
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MDVLLLLLAAAALWARAGALINLKYSVEEEQRAGTVIANVAKDAREAGFVLDPRQPTAFR
VVSNSAPHLVDINPNSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYQITPNDLFGLETKIRG
DGSRFAELVVEKSLDRETQSHYSYLITALDGGNPPNLGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENVPPGTPLLHLNASDPDEGTNGQVVYSFHSYVSERARDLFQIDPQSGLITVGG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTVTVHDANDNPPLINLLSVNSELVEVSESA
PPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQAKDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSISYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITTPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQINGEIRTTRAFGENSKTAYELIVVAHDHGKTSLSASALILIYL
SPSLDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVENQNTRNTGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVTSMGSQMPEQ
DQNEGFHCREECRILGHSDRCWMPRNSVPSRAKSPEHGRNIIALSIEATTMDTEPYEDCS
TKRTFATFGKEGSEPLTEERVVNLKGKRTVDLPICSPKVNGAVREAGNGCEAMSPVTSPL
HLKSPLSSKPSVSYNIMHCPVNHDLEQFVNNGPSRPMEAEPRGADSENVMHEINPLLQEC
REKDSPGVKRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctcctgctgctgctggcagctgccgcgctgtgggccagggccggggccctc
atcaacctgaagtactccgtggaggaggagcagcgagcgggcactgtgattgccaacgtg
gccaaggacgcgcgtgaggctggctttgtgctggatccgcggcagcccactgccttccgc
gtggtgtctaactctgcgccacacctggtggacatcaaccccaattcgggcttgctggtg
accaagcagaagatcgaccgggacctgctgtgccgccagagccccaagtgcgtgatctcg
ctggaggtaatgtccagctccatggagatctgtgtgatcaaactggagatcaaggacctg
aatgacaatgcacccagcttccccacagaccaaatagagctggagatctcagagacggcc
agtccaggcacacgagtgccactggagagtgcctacgaccctgactcgggcagctttggc
gtgcagagctaccagattacccccaatgaccttttcggcctggagaccaagatacgtggc
gatgggtcccgcttcgctgagctggtggtggagaagagcctggaccgtgagacccagtcc
cactacagctacctgatcacagccctggatggtggtaatcctcccaacctgggcaccgtg
gagctgagcatccgggttattgactccaatgacaacaacccgctcttcgaggaaccggcc
tacactgtgagtgtgcctgagaatgtgcctccgggcaccccccttcttcacctcaatgct
tctgaccctgatgagggtactaatgggcaggtcgtctactccttccacagctatgtgtct
gagcgtgcccgtgacctctttcagatcgacccccagagtggcctcatcacagtcggtgga
gccattgactatgaggagggccatgtttatgagctggacgtgcaggccaaggatcttggg
cccaactccatcccggcccactgcaaggtgacggtcactgtgcatgatgccaacgacaac
ccgcccctcatcaacctgctctcagtcaacagtgagctggtggaggtgagtgagagtgct
cctccaggctatgtcatcgccttggtgcgggtctccgaccgtgattcaggtgccaatggc
agggtgcagtgcaagctgctgggcaatgtgcctttccgcctgcaggagtatgagagcttc
tctaccatccttgtggatggccggctggaccgggaacagagggaccagtacaacctcact
atccaggcgaaggacaatggtatcccctcccttcaggccacgaagtccttcactgtcaag
atcactgatgaaaacgacaaccatccccacttctccaagccctactaccaagtcatcgtg
caggagaacaatactcctggggcttacctcctctctgtgtctgccagggaccctgacctg
ggccttaatggcagcatctcctatcagattgtgccctctcaagtcagggatatgcccgtc
ttcacctacgtttccatcaaccccaactctggggacatctatgctttgcggtccttcaat
catgagcagaccaaggcatttgaattcaaagtcttggccaaagatgggggcaacccatcc
ctgcagagcaatgccaccgtcagagtgattgtcctggatgtcaatgacaacacccccgtg
atcactacccctcccttggtcaatgggacagcagaagtgtacatccctaggaatgcgggg
gttggctacctagtgactgtagtcaaggcagatgactatgatgagggtgaaaatggaaga
ctatcctatgaaatggtagaaggggatagaggattttttgaaatagatcaaatcaatgga
gagataaggaccaccagagcatttggggagaattcaaagaccgcttatgagctcattgta
gtggcccatgaccatggaaaaacttctctctcagcatctgccttgattctgatatacctg
tctccatctctggatgcccaggaatccataggatctgttaacttgtcactgattttcatt
attgccctgggttctattgcagctattctttttgtcaccatgatctttgtggcagtaaag
tgtaaaagggataacaaggaaatcaggacctacaactgcagaattgccgagtactcctat
gggcatcaaaagaaatcaagcaagaagaaaaaaatcagcaagaacgatatccggctggta
ccacgggatgtagaggagactgacaaaatgaatgttgtgagctgctcgtcccttacttcc
tctctcaactactttgactatcatcagcagaccttgcctctgggctgtcgcagatctgaa
agtaccttcctcaatgtggagaatcagaacacaaggaacacagggtccaaccacatctat
catcacaccttcactgggcaaagtccccagcagccagatctgatcatcaatggaatgcca
ttgccagagactgaaaactactcttttgattccaactacgttaacagcagagcccattta
ataaaaagcagttcaacattcaaggacttagaggggaatagtctcaaggatagcgggcat
gaggagagtgaccagactgacagtgaacatgatgtccaacggggcctatattgtgacacc
gccgtcaatgatgtgctgaataccagcgttacttctatggggtctcagatgcctgaacaa
gatcagaatgaaggatttcactgtagggaagagtgcaggatccttggtcactcagacaga
tgctggatgccccggaactctgtccccagtcgtgcaaaatcccctgagcatggaaggaac
atcattgcactctctatagaagctaccactatggatacagaaccttatgaagactgtagt
acaaaaagaacttttgcaacatttggcaaagaagggagcgaacccctcactgaggagcgg
gttgtcaacctgaaaggcaaaagaacagtggatctgcctatctgcagcccaaaggtaaat
ggcgcagtccgtgaggcagggaatggctgcgaagccatgagccccgttacatcacccctc
catctgaagagccccttgtctagcaaaccttcagtgtcctataacataatgcactgccca
gtaaaccacgacctggagcaatttgtaaacaatggcccttctcggcctatggaggcagag
cctaggggggcagacagtgaaaatgtaatgcatgaaattaacccacttctgcaagaatgt
agagaaaaggactctccaggagtgaagagactaaaagacatagtactctaa
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