Crocodylus porosus (Australian saltwater crocodile): 109311167
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Entry
109311167 CDS
T07440
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109311167 (PDZRN3)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109311167 (PDZRN3)
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
109311167 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
109311167
NCBI-ProteinID:
XP_019392178
Ensembl:
ENSCPRG00005015721
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MDNQDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGKDLSKATHEQAVEAFKTAKE
PIVVQVLRRTPRTKIFSSSHESQLVDMGTQTDITFEHIMALTKMGSPTPPVSVLDPYLLP
EDHSSVHEFYDPNDYMGGIHQEMDREELELEEVDLHRVNSQDKLGLTVCYRTDDEDDIGI
YVSEIDPNSIAAKDGRLREGDRIIQINGIEVQNREEAVALLTSEESKNVSLLVARPEIQL
DEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASILQQKKHDEDGGTTDTATILSNQHEK
DSGVGRTDDSTRNDESSEQENNADDHMTSSNTLGSQQKLPYSHDTLGSGDVPFSNESFIS
ADCTDADFLGIPVDECERFRELLELKCQVKSGNPYSLYYHNSALDISKSDQESVDRELEM
LNEELRNIELECLNIVRAHKMQQLKEQYREPWMLHNSGFRNYNTSIDLRRHELSDITELP
EKSDKDSSSAYNTGESCRSTPLTLEISPDNSLRRIAEGTDCQANEGATAYNASQKNLLPS
SESHDSSTAKYHSSPKDPDLGKQLESKDRKNSDGSKSPTHFQKPGGSYISPYHHSPYKHA
HIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSSSQSEPRMEWKVKIRSDGTR
YITKRPVRDRLLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHLVKAKEQRRR
REFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSP
DGTRVYNSFLSVTTV
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaagacggctcctccagcgaaggaatttttgtatcaaaaatagtcgacagt
gggcccgctgctaaagaaggagggctgcaaattcacgacaggattattgaggtgaacgga
aaggatttatccaaagcaacgcacgagcaggcagtggaagccttcaaaacagcaaaggag
cccatcgtggtacaggtcctgaggagaacgccacgcaccaagatcttcagctcttctcat
gagtctcagctggtcgacatgggcactcagactgatatcacctttgaacacatcatggct
cttaccaagatgggatcccctactccaccagtctcggtgttagatccatacctcttacca
gaagaccattcatcagtgcatgaattctacgacccgaatgactatatgggaggtattcat
caagaaatggacagagaggagttggaattagaggaggtggacttgcatcgagtgaacagc
caggacaagcttggccttactgtctgttataggaccgacgacgaagatgacattggtatt
tatgtaagcgagatcgatcccaacagcattgctgcaaaagatggtcgtctacgagaggga
gatcgcattattcaaattaatggcatagaagtacagaaccgagaggaagctgtggcactc
ctcaccagtgaagaaagcaagaatgtctccttacttgtagcaaggccagaaattcagctg
gatgaaggctggatggatgatgacagaaatgattttctggatgacttgcacatggacatg
ctagaggaacagcaccaccaagcaatgcaatttactgccagcatacttcagcagaagaag
cacgatgaagatggaggtaccacggacacagcaacgattttatccaaccagcacgagaag
gacagcggtgtgggacgcacggatgacagcactcgcaatgacgagagctcagagcaagag
aacaacgctgacgatcacatgacttcctctaacactttagggagccagcagaagctgcca
tacagtcatgacacgcttggaagtggcgacgtgccgttcagcaacgaatcgtttatctcg
gctgattgcacagacgccgatttccttggcatcccagtagacgagtgcgagaggttccgg
gaactactggaactcaagtgtcaggtcaagtctggcaacccctacagcctctattatcac
aacagtgccctggatataagcaaaagcgaccaagagagcgtcgatagagagctggagatg
ctgaacgaggagctgaggaacattgagttggagtgcctgaacatcgtgagagctcataaa
atgcaacagctgaaagagcaataccgagagccctggatgctccataacagtgggttccgc
aactacaacacaagcattgacctgcgcagacacgagctctctgacattacagagctcccg
gaaaaatccgacaaggatagctcgagtgcatataacacaggggaaagctgccgaagtaca
ccgctcacactagagatttctcctgacaattcactgcgcagaattgcagaaggaaccgat
tgccaagctaacgagggggcaactgcatacaacgcctcccagaagaatttgctacctagc
tcggaaagtcatgactccagcactgctaagtatcactcgtctcctaaagatcctgacctt
ggcaagcagctggaaagcaaggacagaaaaaacagcgatggaagcaaaagcccaactcac
tttcaaaaaccgggtgggtcctacatctccccatatcatcactctccatacaagcatgct
catatccctgcccatgcacagcactatcagagctacatgcagctgattcaacagaaatca
gctgtggaatatgcacagagccaaatgagcctggtcagcatgtgcaaagacttgaattcg
tcaagccagagcgagcccaggatggaatggaaagtcaagatcaggagcgatgggacccgc
tacattacgaagaggccagtcagggacagactgctgagagagcgtgccatcaagattaag
gaagagcgcagcggtatgactacagatgacgatgcgataagtgaaatgaagatgggccgt
tactggagcaaggaggaacggaagcagcatttggtgaaagcgaaggagcagaggcgaagg
cgagagttcatgatgcagagcaggttggattgtttaaaggaacagcaaggtgcagaagag
aagaaggaaatgaatatcattgaactgagccacaaaaaaatgatgaagaaaagaaataaa
aagatatttgacaactggatgacaatccaagaactgttaacccatggcacaaagtcaccc
gatggcacaagagtgtacaattccttcctgtcagtgactactgtataa
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