Crocodylus porosus (Australian saltwater crocodile): 109311252
Help
Entry
109311252 CDS
T07440
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
109311252 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109311252 (XPC)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
109311252 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
RNA_pol_Rpb5_N
Motif
Other DBs
NCBI-GeneID:
109311252
NCBI-ProteinID:
XP_019392349
Ensembl:
ENSCPRG00005017622
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MGRKRRGAPARDAASKRPKPPRSPDDDFEEEKPILKRSVSKAPSGKKKKKEDGDTGVYSP
ANRATRQKGSKSRGKGENNKAIKNEGNSKEEEMCSGLPSPSGNRRSLKRESTVKKEMDEN
SDDSNEDESEDEWEDVEELQEAIPDKSGEAVGLPALLLSGKPVEIEIETPQQAKKRERRE
KRKTEFETYLRRMMKRFNKEVHEDTHKVHLLCLIANGFYRTRICNQPDLQAIGLSIIPNH
FTKVPAGRVDVLYLSNLVKWFVGTFTINTELSVEDGENMQCILERRFAIYAARDNEELIH
IFLIILRALQLLCRLVLSLQPIPLKEVAGKGKSSSKRPSVSGVTKEQEGSVRNPKKSSGP
RAKKKEALLDNARADKKPKKSDIPGTKRVSKSKMAKHVQEQKESSAEEGSPGEKEVLRTK
NNRRRSVASKVSYKEESGSGGDSDSEFEASEEESSVSDEDFEIVPRKQRRSSGPKKPGVT
VKSNRKAWPLESKLPKNSGEAEHALAKKAALGSFNSPKKSKIISTDEDDMEQEMVKVTSA
DQWLEVFVEREDKWVCVDCVRGTVNQPQLCFRYATKPVSYIVGIDNDGCVKDITQRYDPA
WMTLTRKYRVDPEWWEETLEPYKSTFVERDKKEEMEFQVKLQDQPLPTAIGEYKNHPLYA
LKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRIGEVPYKMVK
GYSNHARRARLAEPANRDKDDLALFGLWQTEEYQPPVAVDGKVPRNEYGNVYLFLPCMLP
VGCVQLKLPNLNRVARKLGIDCVQAVTGFDFHGGYSHPVTDGYIVCEEYREVLVAAWENE
QAEMERKEKEKREKRALGNWKLMVKGLLIRERLKQRYCNKSETSGMEKGAGFSSDEEEGP
SSETPAEDVAAFWPLNRQVEKQDEEKKVRKSKREKKGEAAHLFPFEKL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaaagcgccgcggagccccggcgcgggacgccgcgagcaagaggcccaagccc
ccgcgcagcccggacgatgactttgaagaggaaaagcctattttgaaaaggagtgtctca
aaagctcccagtggaaagaagaagaagaaagaagatggtgacactggagtttacagtcca
gcaaatagagctacaaggcaaaaaggatcaaagtcaagaggaaagggggaaaataacaaa
gctataaaaaatgaaggaaattctaaagaggaggaaatgtgcagtggtttacccagcccc
tctgggaacaggaggagtttgaagagagaatccactgttaaaaaagagatggatgaaaac
agtgatgacagcaatgaggatgaaagtgaggatgaatgggaagatgtggaagaactccag
gaggcaattccggataagtcaggagaagctgttggtcttcctgcactgttgctgtccggc
aaaccagttgaaatagagattgaaactccacaacaagcaaagaaaagagagcgaagagag
aagaggaaaacagaatttgagacctatctgcggagaatgatgaaacgttttaacaaggag
gttcatgaggatacgcacaaggttcatcttctgtgcttgatagccaatggtttctataga
accagaatctgcaaccagcctgatcttcaagctattggcctttccatcattcctaaccac
tttaccaaagtacctgccggacgggtggatgttctctatctctccaacttggtaaaatgg
tttgttggaaccttcactatcaacactgagctctctgttgaagatggggagaacatgcag
tgcatcttagaaaggcgctttgccatctatgctgcacgagataatgaagagctgattcat
atatttttaattattctccgagctttacagctgctctgccgacttgtgctatctctccag
cccattcctctgaaggaggtggcaggaaagggaaagagctcctccaagaggccttctgta
agtggcgtgacaaaagagcaggagggctctgttagaaatcctaaaaaaagctctggccca
agagccaagaaaaaggaagcactcttagacaatgcaagagcagataagaaacccaagaaa
tcggatatccctggtactaaaagggtgagtaagtcaaaaatggctaagcatgtccaggaa
cagaaggaatcaagtgctgaggaaggcagcccaggagaaaaagaagtgctaaggactaaa
aataatcgccgaagaagtgtagcctcaaaagtgtcttacaaagaggagagtggaagtggt
ggggacagtgattcagagtttgaggcttcagaggaagagagtagtgtctccgatgaggat
tttgaaattgtccctagaaaacagaggaggtcatcagggcccaagaaaccaggggtcaca
gtcaaaagcaacaggaaagcttggcctttagaatcaaagctacccaagaattcaggtgaa
gctgagcatgcattggcaaaaaaggctgccctgggctcttttaattcacccaagaaaagt
aaaataatttctactgatgaggatgatatggagcaggagatggtgaaagtgacaagcgca
gaccaatggcttgaagtttttgtggagcgggaagacaagtgggtctgtgtggactgtgtt
cgtggcactgtcaatcagccccagctctgcttcagatatgccacaaagccagtgtcctac
attgtggggattgacaatgatgggtgcgtaaaggacatcacacaaaggtatgaccctgca
tggatgaccttgacaaggaagtatcgcgtggaccctgagtggtgggaagaaactttggag
ccatataagagtacctttgtggaaagagacaagaaggaagaaatggagtttcaagttaag
cttcaagatcagcccctgccgacagccattggagagtacaaaaatcaccctctttatgca
ctaaagaggcatcttctgaaatacgaggccatctatcccgagacagctgctattttaggc
tactgcagaggagaagctgtgtattccagggactgtgtgcatacactgcattcaagagac
acctggctaaagcaagcgcgagtagtgcggattggagaagtgccctacaagatggtgaaa
ggatattccaaccatgcgaggagggcacgattggcagagcccgccaaccgagataaagac
gacttggctctgtttggcttatggcagacagaggagtaccagcctcccgtggccgtggat
ggaaaggtgccccggaatgaatatgggaacgtttacctcttcctgccctgcatgttacca
gtaggctgtgtgcagctaaagcttcctaacttgaatagagtggcacggaaactgggcatt
gactgtgttcaagccgtaactggatttgattttcatggcggctattcacatccggtcact
gatggctacatagtctgtgaggaatacagagaggttcttgttgcagcctgggagaatgaa
caagcagagatggaaaggaaggagaaggagaaacgagagaagagagcactggggaactgg
aaactgatggtgaaaggacttctcataagggagagattgaagcaacgctactgcaacaag
agcgagacctctgggatggaaaaaggagctggattttcttctgatgaagaggaagggcca
agttcagagactccagcagaggatgtggctgctttttggcctctaaatcgacaagtggag
aaacaggatgaagagaagaaagtcagaaagagcaagcgggaaaagaaaggagaagcagca
catttgtttccctttgagaagttatga
DBGET
integrated database retrieval system
