Crocodylus porosus (Australian saltwater crocodile): 109312080
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Entry
109312080 CDS
T07440
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04512
ECM-receptor interaction
cpoo04514
Cell adhesion molecules
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109312080 (SDC1)
04514 Cell adhesion molecules
109312080 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109312080 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109312080 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cpoo04090
]
109312080 (SDC1)
00535 Proteoglycans [BR:
cpoo00535
]
109312080 (SDC1)
Membrane trafficking [BR:
cpoo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109312080 (SDC1)
CD molecules [BR:
cpoo04090
]
Proteins
109312080 (SDC1)
Proteoglycans [BR:
cpoo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
109312080 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
109312080
NCBI-ProteinID:
XP_019393675
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MAGFCNFPDMELHAGKTNAESLQEDLHGLSFSLKQTTNLNLPPEDLDSSGDDDAFSGSGA
GPLPPQSETVISVGSTNSSIDDDKLHTTVHYLHEAGSPADEEVVAPSSSSDVVTDEPEVD
VQDEITHELVTFSAGAWEEVITTNPATPSPTVKVTTSQVSSTADAVEPAIHSLDVVDFAK
EEHDPNFNPASKEDVTTAALHTATTLGTSGPAHEDGEIVTSEDGSGDVGDFFISRNDEKP
VDSDRNTDVDSEMNNKAAGALGIMDRKEVLGGVIAGGLVGLLFAVFLVGFMLYRMKKKDE
GSYSLDEPKQSNGGYQKPHKQEEFYA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctgggttctgtaacttccctgacatggagctacatgcaggcaagacaaatgcagaa
agtcttcaggaagacttacacggtctgtctttctctctaaagcaaactacaaatctgaac
cttcctcctgaagacttggactcatctggagatgatgacgctttctctggctcaggtgct
ggtccattgcctccacagagcgagacagttatttcagtaggatctacaaattcatccata
gatgatgacaaacttcacacaactgttcactatctccatgaggcgggaagcccagctgac
gaggaagtagtagctccatcctccagcagtgatgtggtgacagatgagccagaagtagat
gttcaggatgaaataacacatgaactggtcaccttcagtgcaggtgcatgggaggaagtg
ataactacaaatcctgctactcctagtcccactgtcaaagtaactacctcgcaagtctca
agtacagctgatgccgtggaacctgccatccatagtcttgatgtggttgattttgctaaa
gaagagcacgatcccaactttaaccctgctagcaaggaagatgtcactacagctgctctc
cacacagccactacccttgggactagcggtccagcacatgaagatggagagattgtgact
tctgaggatggctctggagacgtgggagacttcttcatctctaggaatgatgaaaaacca
gtagactctgacaggaataccgatgttgactctgaaatgaataataaagctgcaggagcc
ttgggaataatggaccggaaagaagtcctaggaggcgtcattgctggaggattagtaggc
ctgctatttgcagtattcctagttgggtttatgctgtacagaatgaaaaagaaagacgaa
ggaagctattccttggatgaaccaaagcagtcaaatggaggataccaaaaaccacacaaa
caagaagaattctatgcgtaa
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