Crocodylus porosus (Australian saltwater crocodile): 109312091
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Entry
109312091 CDS
T07440
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109312091 (TAF1B)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109312091 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
109312091
NCBI-ProteinID:
XP_019393685
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MVLGSGLPRVDVHVAFLQVDLEDFQITPALSKCLDDLLLIAAFMPVHDQELPGLSILLLS
SLRDYNEPCVQCSDVNWGLTDEGKFYCKSCHNVIERTKEVLVSDAIPNTKIQSLSKGLRK
KKKIDKGWEWYVCEGFQYILKKQAEALQKLGVCPRMKDEILCCFWRCYLQKSKQAYCPRP
VNDTPLELVVSDSATDVDSEPERVSPFDLSSFTESDIDLQTECSFGQISSVDRTSETMSV
YSGSIDGSSYVLKRTKGNMRMSMPMTLSFCYMALLWLKEPVTLSDLLRFVAEGHIPYINA
FQYFPEEIKLYGLDLKIFRVESWPEYEEVHNKMLELAAFLDLPRFPAITDSCFLHPDMLC
IKYLMEANLPDELHSWTCRVVKKTGVGETNFLTLDAENESARKANYDILSVAIIIVVLKL
LLLLNDQYEWVLSNFAEERNKKNKEGRLWFDFRKWYKVVKTCMDIEQKKLAEERARCLWK
CETPLFYSAKQKAATLKKRQMILSLQRQFGALTDSPQVTEKQSPSSFQLTWDEENPDGSC
FHGHSLEGFLQEKGNLHRPMNPEYWLCTVKLCNKKVCGHLAHYKEGDFSKSYQFILNLFS
FLLRVDVSLIHEEVCLIEHKLFNARLHKKSKKQSKPKEVEIPKAPGNTG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgggcagtggtctcccacgagttgatgtccatgttgcatttcttcaagttgac
ctcgaggacttccaaatcacacctgccttgtccaagtgcttagatgaccttcttctaatt
gctgctttcatgccagttcatgaccaggagcttccaggcctctcaatcctgctcctgtca
tcgctaagagattataatgagccctgtgtacaatgttctgatgtaaactggggtcttact
gacgaaggcaaattttattgtaaatcttgtcacaatgttatagagagaactaaagaggtt
ttagtttctgatgctattcctaataccaagatccagtcactctccaaaggattaagaaag
aagaaaaaaattgataaaggatgggaatggtatgtttgtgaaggctttcagtatatactc
aagaagcaagctgaagccctgcaaaaattaggggtgtgcccacggatgaaggatgaaatt
ctctgctgtttttggagatgctaccttcagaagagcaaacaggcatattgccctagacca
gttaatgacactcccctggaactggttgtatctgacagtgctactgatgtggatagtgaa
ccagagagagttagtccttttgacttgtcatctttcactgaaagtgatatagatttacag
acagaatgcagctttggacagatttcttcagttgacaggacctcagaaaccatgtctgtc
tactctgggtcgattgatggtagctcgtatgtacttaagaggacaaaaggaaacatgagg
atgtcaatgccaatgacactttcattctgttatatggcattactgtggctgaaagaacca
gtgaccttgtcggatctcttaaggtttgttgctgaaggtcatattccttacataaatgct
tttcagtattttccagaggagattaaattgtatggacttgatctcaaaatctttcgtgtg
gagtcttggcctgagtatgaagaagtacataacaagatgcttgaacttgcagcattttta
gacttgcctcgctttccagctataactgacagctgctttcttcatccagacatgttgtgc
ataaagtatttgatggaagccaacttacctgatgaattgcacagttggacttgccgagtg
gtaaaaaagaccggtgttggagaaacaaactttctgactcttgatgcagagaatgaatca
gcaaggaaagcaaattatgatattctttctgtagccatcatcatagtggtgctcaaattg
ctgcttttactaaatgatcaatatgaatgggtactttcaaactttgctgaagaaagaaac
aaaaagaacaaagaaggccgcctatggtttgatttcagaaagtggtacaaggtagtaaag
acatgtatggatatagagcaaaagaaattggctgaagagcgtgccaggtgtctgtggaaa
tgtgaaacaccactattctactcagccaaacaaaaagctgccactttaaagaaaagacaa
atgatactgagcttacaaaggcagtttggcgcactgacagattcccctcaagtaactgaa
aagcaaagcccttcaagtttccagttaacctgggatgaagaaaacccagatggaagttgt
tttcatgggcatagcctggagggatttttgcaagaaaaaggcaatttgcatagacccatg
aaccctgaatactggctttgtacagtcaaactatgtaacaaaaaggtatgtgggcatctg
gcacactataaagaaggagacttttcaaagagctaccagttcatcctaaacctcttctcc
ttccttctaagggtagatgtttctcttatccatgaggaggtgtgtttgatagaacacaag
cttttcaatgcaagacttcataagaagtcaaaaaaacaatccaagcccaaggaagtggaa
attcctaaagctcctggaaatacaggctaa
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