Crocodylus porosus (Australian saltwater crocodile): 109312291
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Entry
109312291 CDS
T07440
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109312291 (MED16)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
109312291 (MED16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
109312291
NCBI-ProteinID:
XP_019393789
Ensembl:
ENSCPRG00005015078
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MDLAYICEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTHMVHIIDTEHPW
DVYSINSGHVEIITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADIAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTNPARKDKYPAITHLKFLARDMSEQVLLCASNQNTSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQTMAVFYGSSSQRPVDEQTIKRQRTASPLVHF
KAMQLSWTSLALVGIDNHGKLSMLRIIPSMGHALDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTVARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGAALGMLRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCRDENHPTEPDDTLIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLIGYTVSSQFDAFVRGPLMLCMQCISPGSWSLKP
FLLPRAPGQPKIDHLRQLHLGAYPTEECKSCTRCGCVTMLKSPNKTTAVKQWEQRWIKNC
LCGGLWRRMPLSYF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggacttggcttacatctgtgagtgggagaaaaggcccaaaagcaaccactgcccttca
atcccactggtttgtgcttggtcctgcaggaacctgattgcattcacgacagacctcaaa
aatgaagaggaaaaagatctcacccacatggtccatatcatcgacacagagcatccgtgg
gacgtttattccattaactctgggcatgttgaaatcattacctgcttagaatgggatcag
tcaggctccaggctcctgtcagcagatgcagatggacacatcaagtgttggagcatgacg
gatcacctggccaacagctgggagaacacggtgggcagcatggtagaaggagatccggtc
gtggccctttcgtggttgcacaatggggtgaagctggccctgcatgtggaaaagtccgga
gcatccaactttggagagaagttctctcgagtcaagttctccccgtcgctgacgctgttc
ggggggaagcccatggaaggctggatcgctgtgactatcagcggcctggtgacagtctcc
ctcctgaagcccaatgggcaggtgctgacgtccacagagagcctatgccgtctacgatgc
cgtgtagccctggcggacattgccttcacgggtggggggaacatcgtggtggccacatca
gatgggagcagcacctcccctgtgcagttctacaaggtgtgtgtcagcgtggtgaacgag
aagtgcaagatcgacaccgagatcctaccctccctcttcatgcgctgcaccaccaaccct
gcccgcaaggacaagtatccggccatcacacacctcaaattcctggcccgggacatgtcg
gagcaggtactgctttgtgcctccaaccaaaacaccagcatcgtggagtgctggtctctg
cggaaagagggcttaccagtcaataacatcttccagcagatctctcctgtggtcggtgac
aagcagcccatgatcctgaaatggcggattctgtcggccaccaatgatttggaccgcgtt
tctgcagtggctctccctaaactgcccatctctttaaccaacactgatctgaaagtggcc
aatgacactaaattcttccctggattggggctcgcattggccttccacgatggcagcgtc
cacatcgtgcatcgcctgtccctgcagaccatggccgtgttctacgggtcctcctcccag
cgcccagtggatgagcagacgatcaaaaggcagcggacggccagtcctttggtccacttc
aaagccatgcagctctcatggacttccctggctctggttggcatcgacaatcatggcaag
ctgagcatgctccggatcattccctccatgggccacgcgctggacatgaacatgtccctc
cggcacctgctcttcctgctggagtactgcatggtgacgggctatgactggtgggacatc
ctgcttcatgtgcagcccaacatggtgcagaacctggtggagaagttacatgaggagtac
atgcgccagaatgccgccctgcagcaggtcctctccacacggattgttgccatgaaggcc
tctctctgcaagctgtcctccagcacggtggctcgcgtgtgtgactaccacgctaagctt
ttccttattgccatcagctgcaccttgaagtcactgctgcgcccgcacttcctgaacact
cctgacaagagccctggggacaggctcaccgagatctgctccaagatcacagacatagac
attgacaaagtgatgattaacctgaagacggaggagtttgtgctggagatgaccacactg
cagtccctgcagcagctcatccagtgggtgggagactttgtgctctacctgctagctagc
cttcctaaccagggctccccggtgcgcccagggcacagctttctgcgggatggtgcagca
ttgggtatgctccgagaactcatggtggtgatccgcatctggggcctgctgaaaccaagc
tgcctccctgtctacacagcgacctcggacacccaggacagcatgtccctcctcttcagg
ctgctgaccaagctctggctctgctgccgtgatgaaaatcacccaaccgagccggacgat
accttgattgatgagtgttgcctgcttcccagccagttgctcatccccaatattgactgg
ctgcccatcaatgacggcatcatcagcaagctgcagaacaagcagctggtcaggctacag
tttgggaaagcccctgggctcatcggctacacagtgtcttcacagttcgatgcctttgtc
agagggcccctcatgctgtgcatgcaatgcatcagccctggcagctggagtttgaaaccc
tttctcctacccagggcaccagggcaacccaaaatcgaccacctgcgccagctgcacttg
ggggcatatcccaccgaggagtgcaagtcctgcacccggtgcggctgcgtgaccatgctg
aaatcgcccaacaaaaccacagcggtgaaacagtgggaacaacgatggatcaaaaactgt
ctgtgcggggggctgtggaggcggatgcccctcagctatttctga
DBGET
integrated database retrieval system
