Crocodylus porosus (Australian saltwater crocodile): 109312475
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Entry
109312475 CDS
T07440
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109312475 (COL13A1)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109312475 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109312475
NCBI-ProteinID:
XP_019394068
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MLEEKGWKGASQSAFDRGCVSPHRTGDGERCCRLPLLLGFGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRSSQLPAWLSADQMETAILGRVDQLLEEKLKFSLPRHREVRETHQRC
NCPAGPPGPTGRAGLPGDKGTMGIPGRRGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTR
GFPGFPGPIGLDGKPGHPGQKGEMGAAGPKGQPGPPGQKGEKGQCAEYPHREYLSTTLAA
LRSNQILTLKGEQGQAGIQGPPGPPGPPGPTGPAGPAGHSGQPGPSGPPGRAGEPGKPGK
DGKGIPGPPGPKGDPGIQGYSGRKGEVGEAGLPGAPGLPGPVGPKGEMGDTGMKGVPGMA
AAGMKGEPGTPGEKGEKGKAGDPGLPGLLGLKGEKGDAGNVLGGGKGEAGPPGLPGAPGP
KGEAGDIGQPGLQGEKGEPGAPGDHGPVGPRGPKGEPGKDEMVDYDGNINDALQEIRTLA
LMGPPGLPGAAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPLGPQGPSGKDGPPG
LKGEPGLMGTPGLKGDKGEAGQAGSPGLDGPAGEKGEQGEEGIPGSSGLPGPTGLPGLTG
EKGEPGESGEKGNPGESVSGPPGPQGPPGASGPQGLPGPKGEAGIDGMKGEKGVQGEKGD
RGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGNAGPMGPAGLPGLPGS
PGDKGNRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggaaaagggctggaaaggtgctagccagagtgcctttgacaggggatgtgtt
tctccccacaggacaggggatggggaaagatgctgtagacttcctctactgctgggcttt
gggcttcctggggtgtctttgctttctctggtgctgagcctcctgctatactttaggaca
tcagacctgcaatccagggtttctcatttggaagcagacagatcctctcagctccctgcc
tggctctctgcagaccaaatggagacagctattttgggaagagttgaccaactgcttgaa
gagaagttaaagttcagcttgccaagacatcgagaagttcgagaaacccaccagagatgt
aactgcccagcaggtccacctggtcctacaggaagagcagggcttccgggagacaaaggc
accatgggaatccctggacgacggggactaaaagggcagcctggagaaaagggagctcca
ggagaagcgggcatgtccatcattgggccccgagggcctcctggacagcctggaacaaga
ggttttcctggatttccgggccctattggtttggatggcaagccaggccatcctggacag
aaaggggagatgggtgcagctggtcctaaggggcagccgggacctccaggacaaaaagga
gagaagggtcaatgtgctgagtacccacacagggaatacctaagtactacacttgcagct
ctacgctctaatcagatccttacactgaagggtgaacaaggacaggcagggatccagggc
ccgccagggccacctggtccaccagggccaactggaccagctggaccagcaggacattca
ggacaacctgggccaagtgggccacctggcagagcaggggagcctgggaagcctggcaag
gatgggaagggcatacctggaccccctggaccaaagggagacccaggaattcaaggctat
tctggaaggaagggtgaggtaggcgaggcaggcctaccaggtgcacctggccttcctgga
cctgttggccccaagggtgaaatgggggacactggcatgaagggggttcctggaatggct
gctgcagggatgaagggagagccaggcactccaggagaaaagggagagaaaggaaaagcc
ggtgatcctggcttgcctgggctcctcggactaaagggagagaagggagatgctggtaat
gtgctcgggggaggtaaaggagaagctggacccccaggattacctggggccccaggacca
aagggagaagctggtgacattggccagcctggactgcagggagaaaagggagaacccggt
gcacctggagatcatggacccgttggtccaaggggtcccaaaggagaaccaggaaaggat
gaaatggtggattatgatggtaatatcaatgatgctctacaggaaatacgaaccttggcc
ctgatgggacctcctggacttccaggagcagctggacccccggggccaccaggacaaaag
ggtgaaattggcttgccagggcctcctgggcatgatggggaaaagggtccacgaggtaaa
ccaggagaaatggggcctcttggtccccaagggccctcaggaaaggatggacctccagga
ttaaagggagagcctggacttatggggactccaggactgaaaggagacaaaggggaggca
ggacaagctggctcaccgggtctcgatggcccagccggggagaaaggagaacaaggtgag
gaagggataccaggatcttctggattaccgggtccaactggacttccaggacttacagga
gagaagggagaacctggagaaagtggagaaaaaggaaacccaggggagtcagtatctggg
ccacctgggccccaaggtccacctggtgcttcaggtcctcaaggccttccaggaccgaag
ggggaagcagggattgatggaatgaaaggagagaagggtgtccagggtgaaaaaggagac
cgaggtccactgggattacccggtgcctcaggtttagacggcaggcctggaccaccgggt
actccaggaccaattggagttccaggaccagcaggaccaaaaggggaaaggggaagtaaa
ggagaccctggaaatgcaggaccaatgggaccagctgggcttcctggtttaccaggctca
cccggcgacaaaggaaaccggggggagaggggcaagaaaggctctagagggtctaaaggg
gataagggagaccaaggagcgcctggattagatgcaccctgtccattgggggaagatggc
ttgccagttcagggatgctggaataagtga
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