Crocodylus porosus (Australian saltwater crocodile): 109312946
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Entry
109312946 CDS
T07440
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpoo03009
]
109312946 (DDX54)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109312946 (DDX54)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
109312946 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Frtz
Motif
Other DBs
NCBI-GeneID:
109312946
NCBI-ProteinID:
XP_019394877
Ensembl:
ENSCPRG00005007112
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MARPRRRPRRPSVRAAPGSGSEEEEGGEFHVEPEDEASAGRPAPAKMLPAFPTADCASDV
EPDTREMVRAQNRKKKKSGGFQSMGLSYPVFKGIMKKGYNVPTPIQRKSIPVILDGKDVV
AMARTGSGKTACFLIPMFEKLKAHSAQTGARALILSPTRELALQTMKFTKELGKFTGLKT
ALILGGDKMEEQFAALHENPDIIIATPGRLMHVAVEMNLKLQSVEYAVFDEADRLFEMGF
AEQLQEIIARLPESRQTVLFSATLPKLLVEFARAGLTEPVLIRLDVENKLSEQLKLAFFH
VRADDKPAMLLHLLRNVMRPQDQTVVFVATKHHAEYLKELLMGQGVNCTYIYSSLDQTAR
KINIAKFSHGKCPVLLVTDVAARGLDIPMLDNVINYSFPAKAKLFLHRVGRVARAGRSGT
AYSLVAPDETPYVFDLHLFLGSPLTLASPHDKPSDAGGVFGRVPQSVVDDEECLLLTDHE
SSLDLQSLRRVAENAHKQYLKSRPSPSPESIKRAKELDFSQLGIHPLFSSRFEEDELERL
KLVDSIKTYRSKATIFEINATSKTVASDVMRAKRSHDHARIDKYQQGQQEKQAAAALQAH
AQSPPATVPEEENGRLQDVFSSVVGRKQRQRQMGDTVPKKKQREALQDKEFYIPYRPKDF
ESERGLSVTGEGSAFEQQAAGAVLDLMGDETHNMNKSKQLLKWDRKKKRFVGQTGQGDKK
KIRTESGRLIGSSYKSNLYEKWKQRYKIDERDSEEEGESQRRGGRRGRRQGTRHPQPSPG
RDGAPRGKVRSELRSKQQILKQRRKATKQRFLQAGGLRRLKAKNQQRVQELRRTAFGRGA
GAKKGKMRKRL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccgcgccgccggccccggcgtccgtccgttcgggccgccccgggcagcggc
agcgaggaggaggaggggggcgagttccacgtggagcccgaggacgaggcgagcgcgggg
cggccggcgcccgccaagatgctcccggccttccccaccgccgactgtgcctcggacgtg
gagccggacacaagggagatggtgcgagcccagaacaggaagaagaagaagtcggggggc
ttccagtccatgggcttaagttatcctgtattcaaaggtatcatgaaaaagggatacaat
gtgccaacacccatccagagaaagagcatcccagtgatattggatgggaaagacgtggtg
gcaatggcccggacgggcagcgggaagacggcttgtttccttatcccgatgtttgagaag
ctgaaggcacatagcgcgcagacaggagcacgtgccctcatcctttcaccaactcgcgag
cttgccttacagaccatgaaattcacaaaagagctgggcaaattcacaggcctgaagact
gcgctgattctgggaggagacaagatggaagagcagtttgcagctctgcatgagaatccc
gacataatcattgccacccccggacgcttgatgcacgtggctgtggaaatgaacctgaag
ctgcagagcgtagagtatgcggtatttgatgaagctgacagactgttcgagatggggttt
gcagagcagttgcaggagatcatcgctcggctccctgagagccgccagactgtgctcttc
tctgccacactccccaagctgctcgtggagtttgctcgggctggtctcaccgagccagtg
ctgatccgtctggacgtagagaacaagctcagcgagcagctcaagctggccttcttccat
gtgcgtgcggatgacaagccagccatgctgctgcacctgctaaggaatgtgatgcgacct
caggaccagacagttgtcttcgtagccaccaagcaccatgctgagtacctcaaggagctg
ttgatgggccagggtgtgaactgcacctacatctacagctccctggaccagactgcccgc
aagatcaatattgccaagttttcacacggcaagtgcccggtgctgctcgtcacagatgtc
gcagcccgtggcctcgacattcccatgctggacaatgtcatcaactacagcttccctgcc
aaagccaagctcttcctgcatcgtgttggccgtgtggcccgtgccggccggagcggcact
gcctactccctggtggcaccggatgagaccccatatgtctttgacttgcacctgttcctg
ggaagcccgctgacccttgccagccctcatgacaagccctcagatgcgggcggggtgttt
ggccgggtgccccagagtgtggtggacgacgaggagtgcctgctgctcactgaccacgag
agctcgctggacctgcagagcctgcgcagggtggcagagaacgcccacaagcagtacctc
aagtcccggcccagtccctccccagagtccatcaagagggcgaaggagctggacttctcc
cagctgggcatccacccactcttcagttctcgcttcgaggaggatgagctggagaggctg
aagctggtggacagcatcaaaacctaccgatcgaaagcgaccatctttgagatcaacgcc
accagcaagacagtggccagtgacgtgatgcgagccaagcgcagccatgaccatgcccgc
attgacaagtaccagcaggggcaacaagagaaacaggctgcagctgctctgcaggcccat
gcccagagcccacctgccacagtgcctgaggaggagaacggacgtctccaggatgtattc
tcctctgtggtgggcaggaagcagaggcagcgccagatgggggacactgtcccaaaaaag
aagcagcgggaggcattgcaggacaaagaattctacatcccctacaggcccaaggacttt
gaaagcgagagagggctgagtgtcactggggagggcagtgcctttgaacagcaggctgcc
ggcgccgtgttggacctcatgggcgatgagacccacaacatgaacaagagcaaacagctg
cttaagtgggaccgcaagaagaaacggtttgtggggcagacaggccagggggacaagaag
aagatccgcacggagagtggcaggctcattggcagctcctacaagagcaacctctacgag
aagtggaaacagagatacaaaattgatgagagagactcggaggaggagggggagagccag
cgcagaggcggcaggcgtggaagaaggcaaggcaccaggcacccacagccctccccaggt
agggacggagccccgcgggggaaggtgcgctcagagctgaggagcaagcagcagatcttg
aagcagaggaggaaggcaaccaaacagcgcttcctgcaagcaggcggactccggcggctc
aaggccaagaaccagcagagggtgcaggaactgcggcgcacggcttttgggcggggggca
ggtgctaagaagggcaagatgaggaagcggctgtag
DBGET
integrated database retrieval system
