Crocodylus porosus (Australian saltwater crocodile): 109313501
Help
Entry
109313501 CDS
T07440
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpoo01001
]
109313501 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpoo04054
]
109313501 (CIITA)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109313501 (CIITA)
Protein kinases [BR:
cpoo01001
]
Serine/threonine kinases: Other
TAF1 family
109313501 (CIITA)
Pattern recognition receptors [BR:
cpoo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109313501 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
LRR_4
NB-ARC
LRR_8
LRR_9
LRR_14
RsgA_GTPase
nSTAND3
AAA_16
AAA_22
nSTAND_NTPase5
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
109313501
NCBI-ProteinID:
XP_019395647
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MNLFKEILPRVRKILSSATLSDAHALLSLMLKEDVISKEYYQTLLHEKDREDLARKISLT
FVEKWDLCLNTLVPLCYLKVYNNKHQSITDGDSSLNRVLAGNKRQTMDSSILTENSFLDL
LHSDIDPVHLYTLLDAKSTENEESEVLTDPETDTINHDQFNNLDIFYTMESSESGEELYI
CSNTREAYARIAGLAEYVLKDPQERQMEDTFGNLVFDEMASESTERFTDVKMQKCHKRKF
LGTAENHCDTSEPKCRKTVDSPAGSTVNSSFLSVTLNGSPVNSSSFSLLHIPFSVTTISP
TGRSFIAPGSIPDCLPVSAKGIQVIPGFPALPQQIISLPVRNGASDIVICPGSSFPTETS
QLASPIFPVNLSGVEISKGSQIPFVPSKQTQKRPKPVEAFCMSLKDYFCDVCKFMPMERE
VTLDQLYIEGALLQGQHETRSGKNIIKGIEREPVIYDLEEKEKTALERNQIFQVPGGKEL
ETKIIVLLGKAGIGKSILVQKICQDWSNGKFSQFEFVFWYECRRLSLPEKQYSLKDFLLE
VFVRPQEGKEEVFKYILQNPSKVLLIFDGFEELQDHDGFTHFPDCQSYKEQYSMRELFAG
LFQKKILSGCTLLLTARPKDKLNQYLSKVDKIIEMVGFSPQQAELYISRYFEGLPYCNDA
MKLIKDCQYLFSHCYSPVMCRFICFLCEMVFEMGHKDLPSTLSTLLLKFFQEKLTPAQTD
GTTIKNQQNIVKLAQVAWSLGEQHQNALKSDLFPSKEIKEFALKHGFVLPFTFPKQSGNK
EEEFGSVFSNFIIQNFLGTLHLVFAEEIKDKSLTKYFSFPSRKKKSHNWLDLMPQFLSGI
LFLQDDPYLCSLSNKDVKKIITKKQKTLLKYIKRVQISSLCPERLLELFHCVYETQDRYL
LQNIALRLEPELSFLGTPLTPPDVYVLHSILKRSKKEFALDLRNSAIDLQGMKDLVGLKN
VTSFRASLTDTMRLWESLEQTQEYDLLKISIQKFAIDPFKAKSMRDISDLSGVVHMQEKM
IHCMKETSGCQIHEIPAIKNLKKIEFALGPACGPRGFLRLVEILVSLPSLQQLDLDALSE
NGIGDEGVKNLSQVFSQLTSLEVLNLSQNEITDLGAEKLATALPSLSSLKTLSLYNNSIC
DAGAENIAKVLPAMASLRVLE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaaagagatcctgcctagagtaaggaaaatcctttccagtgccacactt
tcagatgctcatgctttgctcagcctcatgctaaaggaagatgttatatccaaggaatat
taccagactttactccatgaaaaagacagagaagacctagctaggaagatctctctcacc
tttgtggaaaagtgggatttgtgtttgaacaccttggttcctctgtgttatttaaaagtg
tacaataataagcaccaaagtatcacagatggtgactcatctctaaacagggtcctagct
gggaacaaaagacaaaccatggattcttcaattttgacagaaaatagcttccttgatttg
ctgcacagtgacattgatccagtgcacctgtataccctgttagatgccaagtcaactgaa
aatgaggaaagtgaggttttaacagatcctgaaacagacaccatcaaccatgatcagttc
aacaatttggatatattttatacaatggaaagcagtgagagtggggaagaattatatatc
tgttcaaacacaagagaagcttatgctagaatagctggtttagcggaatatgtgctcaaa
gatccacaggagaggcagatggaagacacgtttggaaaccttgtttttgatgaaatggcc
agtgaaagtacagagagatttacagatgtcaagatgcaaaaatgtcataaacgaaaattc
ttaggcactgcagaaaatcactgtgatacttcggaacccaaatgcaggaaaacagtggat
tcccctgctgggtctacggtgaacagcagtttcttatccgtgactttgaatggttctcca
gtgaactccagctccttctctctcctacacataccattttctgttaccactataagtcca
acaggaagaagttttatagctcctggttccataccagattgtctccctgtcagtgctaaa
gggattcaagtgattccaggttttccagcccttcctcagcagataattagcttgcctgta
agaaacggtgcctctgatattgtcatatgtccagggtcctctttccctactgaaacatca
cagttggcatcacccatttttccagtcaatttatctggtgtagaaatttccaagggatca
caaattccttttgttccttccaaacaaactcagaagagaccaaagccagtggaagctttc
tgcatgtcactgaaggattatttctgtgatgtgtgcaagttcatgcccatggagcgtgaa
gtaactcttgatcagctctacattgaaggggctcttttgcaaggtcaacatgaaacaagg
agtggaaagaatatcatcaagggcatagagagagagccagttatatatgatttggaagag
aaggaaaaaacggctttagaaagaaaccaaatatttcaagtcccaggaggaaaagaactg
gaaaccaaaataattgtgttactgggaaaagcaggaattggcaaaagtattcttgttcaa
aagatctgtcaagattggtccaatggcaagttttctcagtttgagtttgtcttttggtat
gagtgcagaagactgagtttgcctgagaagcaatacagcctgaaggattttctacttgaa
gtctttgtcagacctcaagagggaaaagaggaagtcttcaaatacatattgcaaaatccc
agtaaagtcctcctcatttttgatggttttgaagaactgcaggatcatgatggctttaca
catttcccagactgccaatcttacaaggagcagtacagcatgagggagctattcgcaggg
ctcttccaaaagaagatactcagtggttgtactttattactaacagctagacccaaagac
aagttgaatcagtacttatccaaagtggacaagataattgaaatggtagggttctctcca
caacaggcagaattatacatatccagatactttgaaggattaccctactgtaatgatgcg
atgaaattaatcaaagattgtcagtatctattcagtcattgttatagccctgtcatgtgt
agattcatttgttttctctgtgagatggtgtttgaaatgggacacaaagacttgccttca
acgctttctactctcttactaaaattctttcaagaaaagttgacacctgcacaaacagat
gggacaaccataaaaaatcaacagaacattgtcaagcttgctcaggtagcctggagtctt
ggtgaacagcatcaaaatgctctgaagagtgatctctttccctcaaaagaaattaaagag
tttgctctgaaacatggctttgtactaccatttacattcccaaagcaatcgggaaacaag
gaagaagaatttggcagtgtattctcaaatttcatcatccagaattttctgggtacactt
catctggtgtttgcagaagagatcaaggataaaagcctcacaaagtatttttcattccca
tccaggaagaaaaagtctcataattggttagatttgatgcctcagtttttgtctggaata
ttgttcctgcaagatgacccatacctctgttccctttcaaataaagatgtaaagaaaatc
ataaccaaaaaacaaaaaacactcttaaaatacattaaaagagtacagataagcagtctc
tgtccagaaaggttacttgagctgttccactgtgtttatgaaacacaagaccgctatctt
ttgcagaatatagctttaaggcttgaaccagagctgtcttttctgggcactccgctcacc
ccacctgatgtctatgtgctgcattctattttaaaaaggtcaaaaaaagaatttgccctg
gatctgaggaacagtgccattgatctacaggggatgaaagacctggttggcctgaagaac
gtgacatcatttagagcttccctcactgatacgatgaggctctgggagtcattagagcaa
acacaggaatatgatctgctgaagatttcaatacaaaaatttgcaattgatccatttaag
gctaaatctatgagggacatcagtgatctttctggtgttgtgcacatgcaagagaaaatg
atccattgcatgaaagagacatctggttgccaaattcatgaaattcctgctatcaaaaac
cttaaaaaaatagaatttgcgctgggtccagcatgtggtcctcggggattcttaaggctt
gttgaaattctcgtgtcacttccatctcttcagcagctagacttggatgctctaagtgaa
aatggaataggagatgaaggcgtaaaaaatctctctcaagtattttctcagctgacatca
ttggaagtattgaatttatcacagaatgaaataacagatttgggtgcggagaaactagct
acagctcttccttccttatcttcattaaagacacttagtttgtataacaacagtatttgt
gatgctggagcagaaaatattgcaaaagtacttcctgcaatggcatccttaagggtgcta
gagtga
DBGET
integrated database retrieval system
