Crocodylus porosus (Australian saltwater crocodile): 109313695
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Entry
109313695 CDS
T07440
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109313695 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109313695 (ATRX)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109313695 (ATRX)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109313695 (ATRX)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109313695 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
109313695
NCBI-ProteinID:
XP_019395920
Ensembl:
ENSCPRG00005007627
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MTAELMSESKLDTLVQKLHDFLAHSSEESEDANSPPRLSVNKNTDKSSEPENSPTPMENN
REEMQFIQITGNSSSERSKSLGSSRSKRKPTVVTKYVGSDDEQTLDETVNEDFSNENSEN
DVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRGEEGLHGIVSCT
ACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCRWCAEGGNLICC
DFCHNAFCKKCILRNLGRKELSTIMDENNQWHCYICQPEPLLDLVTACDSVFENLEQLLQ
QNKKKIKVESEKSKIYDHAIKFSPKRNSSNCNGEEKKIDDSYSGSLTYSYKALMVPKDLL
KKAKKLVETTTNMNASFVNFLKKATENSEINPTVQVRQLKAFKSVLSDIKKAHQVLEEGL
NLEIQALDAKIKEKNTKEKKNETKPEKMESKKEEVKEHAVLKEKDIVNPEEKIESAQSDN
EPMDQSVPTTEQTENKNASSKDKRSDTNAEPQYEPNSTEALDMDIVSVPLSVPEDIFETL
ESAMETQTASEEQGSRSAATEQETLNANIKSNTPLKDTKGGPKLKASAKVTKELFVKLTP
VSLSDSPVKTEDQENSLEKEAKTVDAISKAENCDSGKENHDAGNECLPQNDAVLLIEESD
LRRSPRVKTTPLRRQTDVNPLTSNSEEDSNDTGNEKRKQKSSSQSKRKQDKRNSFDKTID
SPKPNKLSKSKKPKVLDQSSDSDEMPAVLKEVAMISQSSSEIDSNTETPKNVQKITNDIK
KQSKKDENGKRKRRSSSSGSDLDSKRGKSTKDSTSAKKKRQNYSDSSNYDSELEREIKSL
SKIESAKKAKKKYSRKEDSYDSSEEEQSKKGTSSKKKKKIHLKKQRDESSNDESENSSPE
KEDTNNFSEDKKSKRIAIKEKKNRDLKQGTSTEKQDDSSEEEQSKKGSKKKKKINVKKQQ
DESSNDESENSSPDKEDTSNFSEDKKSKRTAIKEKKNRDLNQGTSTEKQDELLDFRKSNL
EKTKSCPSEGKNRTQAREKKNRELKKKKAQDDSSSDGAEKTVKKQNCDSSEDKVKNEKAT
EGEEKKSENLKKKRHKKEQNDSSSDVEKSSPEKDGYNSSENNKSKNEMMVKKRRNLRERT
TKRVQIDSSSDAEQPPKKGESSSDDDKCNKRIEAKEKKKISHKKTASKKEQNDSLSSSDE
GSYEDNKKKSRRGSTKESKKGNLKEKKRISKKQKDDLTSSSSDEEENDDQKSTGDGSSDE
QKIVPVTEDLMMSFNTGFCQSSGDEGETKSGAVPMEEEEDDDDPENRIAKKMLLEEIKAN
LSSDEDASSDEEPDEGKKKTGKQNENTGDDEENEKEENSESDSDDEESKKPRYRHRLLRH
KLTVSDGESGEEKKGKSKDPKEGKHRNRRKVSSDDSNDSEFHESEVSEEVSESEDDQRRR
TRSSKKAEAEENRSYKQKKKRRRIKVQEDSSSENKSNSEEEENDDSKSPGKGRKKIRKII
KDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEE
TKEPLVQVNRHIVTKLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQV
VSFLHTVLLCDKLDFSTALVVCPLNTALNWLNEFEKWQDGLEDDEKLEVCELATVKRPQE
RGYMLQRWQEEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHIL
KNEASAVSKAMNAIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPI
QNGQCADSTPVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPLQC
KLYQFYLDHLTGVGSSSEGGRGKAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDE
DSLDDFIASDSDETSMSLSSDDYAKKKKSKGKKAKKESSSSGSGSDNDVEVIKVWNSRSR
GGGEGNTEDLANAPAIPIKSEEGKATSSSNPGSPAPDWYKDFVTDADAEILEHSGKMVLL
LEILRMAEELGDKVLVFSQSLISLDLIEDFLELASTEKTDKEKPIYKGEGKWFRNIDYYR
LDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDI
QSIFRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELT
ELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEE
LTEEERKAAWAEYEAEKKGLTMRFNMPTGTNMPHLNYNTQTPYIPFNLGALSAMSNQQLE
DLINQGREKVVEATNSVTAARIQPLEDIISAIWKDNMTLTESQVQALALSRQASQELDVK
RREALYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMSYQQAAMSHLMMPKPPNLI
MNPSNYQQIDMRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSQGK
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggagctcatgagtgaaagcaagctggacaccctggtacagaagcttcatgac
ttcttggctcattcatcagaagaatcagaggacgcaaattctcctccaaggttatctgtg
aacaaaaatacagataaaagtagtgagcctgaaaacagtccaactccaatggaaaataat
agggaagagatgcagtttatccaaataactggcaatagttcttcagaaagatccaaatct
ttaggatcatcacgttcgaaaaggaagcctactgtggtaacaaaatatgttggatcagat
gatgagcaaaccttagatgaaactgtaaatgaagatttttcaaatgaaaactcagaaaat
gatgttgacatgaaaagcttgccaaaaggtacagtggttgtacaaccagagccagtgctg
aatgaagacaaagatgattttaaagggcctgaatttagaagcagaaataccgttaaaatg
aaacctgaggctcccaaaaagcgtggagaggaaggactgcatggaattgtaagctgtaca
gcttgtgggcaacaggtgaaccattttcaaaaggattcaatctacagacaccctacactg
aaagttcttatttgtaagacttgctacaaatattatatgagtgatgatattagtcgtgat
tcagatggaatggatgaacaatgtagatggtgtgctgaaggtgggaacttaatttgctgt
gacttttgccataatgccttctgcaaaaagtgcattctgcgcaaccttggtcgaaaagag
ctatcaactataatggatgaaaataatcaatggcactgctacatttgccagccagaacct
ttgttggacttggtcactgcatgtgacagtgtctttgaaaatttagaacagttattacaa
caaaacaaaaaaaagataaaagttgagagtgaaaaaagtaaaatatatgaccatgcaatc
aaattttctccaaagagaaacagttcaaattgtaatggagaagaaaaaaaaatagatgat
tcatattctggttcattaacctattcctacaaagcacttatggtgccaaaagacttgctt
aaaaaggctaaaaaactggttgagactacaacaaatatgaatgctagttttgtaaatttt
ttgaaaaaggcaacagaaaattcagaaataaatcccactgtacaggttcgtcaactaaaa
gcttttaaatctgtgctgagtgacatcaaaaaagctcatcaggtattagaagaaggtctg
aatttggagattcaagctttggatgctaaaatcaaagaaaaaaataccaaagagaaaaaa
aatgaaactaaaccagaaaaaatggagagtaaaaaagaggaagtaaaggaacacgcagtc
ttaaaagagaaggacattgtaaaccctgaggaaaaaattgagtcagcacagtctgacaat
gagcccatggatcaaagtgttccaacaacagaacaaacggaaaacaagaatgctagcagc
aaagataaaaggtctgatacaaatgcagaacctcagtacgagcctaatagtacggaggct
ttagacatggatattgtatctgttcctttatcagtccctgaagatatttttgagactcta
gaatctgctatggaaactcaaactgcatctgaagaacagggcagtagaagtgcagcaaca
gagcaggagacactaaatgcaaatataaaatctaatactcctctgaaagacactaaagga
ggtccaaagttaaaagcatcagctaaagtaactaaagaattgtttgtaaaattgactcct
gtttccctttctgattccccagtaaaaacggaagatcaagagaatagtctggaaaaggaa
gctaagactgttgatgcaatatctaaagcagaaaactgtgattctggaaaagaaaaccat
gatgctggcaatgaatgcttgccacaaaatgatgctgttttattgatagaagaatctgat
cttaggcggtccccacgtgtaaagaccactcctttgaggcgtcaaacagatgttaatccc
ttaacatctaattcagaagaggacagcaatgatactggcaatgaaaagcgtaagcaaaag
tcatcatcccaatcaaagaggaagcaagataaaagaaattctttcgacaagactatcgat
agccctaaacctaataaactttctaaatccaaaaaaccaaaagtgctggaccaaagttca
gattctgatgagatgccagcagtccttaaagaagtagctatgataagtcagagttcttca
gagattgatagcaatactgaaacacccaaaaatgttcagaagattacaaatgatattaag
aaacaatcaaagaaagatgaaaatggaaaacgaaaaaggaggagttccagttctggttca
gatttagattccaaaagaggcaaatcaactaaagactctacttctgcaaaaaagaaacga
caaaactattcagattcttcaaattatgactctgagttagaaagagaaataaaaagtttg
agtaaaattgaatctgcaaaaaaagccaagaagaaatactccaggaaagaagacagttat
gattcctctgaagaagagcagagtaaaaaaggaacctctagtaagaaaaagaagaaaata
catttgaagaaacagcgagatgaatcttctaatgatgaatctgagaattcatccccagag
aaagaggacactaataacttttctgaagataaaaaaagtaaaagaatagctattaaggaa
aagaaaaatagagacctaaaacagggaacgtcaacagagaagcaggatgattcctctgaa
gaagagcagagtaaaaaaggaagtaagaaaaagaagaaaataaatgtgaagaaacagcaa
gatgaatcttctaatgatgaatctgagaattcatccccagataaagaggacactagtaac
ttttctgaagataaaaaaagtaagagaacagctattaaggaaaagaaaaatagagattta
aatcagggaacttcaacagagaagcaggatgagttgttggattttaggaagtcaaacctg
gagaaaacaaaaagctgcccttctgaaggtaaaaatagaacacaagctagagaaaagaaa
aacagagagctgaagaaaaaaaaggcacaagatgattcttcgtcagatggtgctgagaag
actgtaaaaaagcagaattgtgattcttcagaggacaaagtcaagaatgaaaaagcaaca
gaaggtgaagagaagaaaagtgaaaacttgaaaaagaaaagacacaaaaaagaacaaaat
gactcttcttctgatgttgagaagtcatctccagagaaagatggctacaattcctctgaa
aacaataaaagtaaaaatgaaatgatggttaagaaaagaagaaatctacgagagagaaca
actaagagagtgcagattgattcatcttcagatgctgagcagcccccgaagaaaggagag
agttcttctgatgatgataaatgcaataaacgtatagaagctaaagaaaagaaaaagata
agccacaaaaagacagcatctaagaaagaacagaatgactctttgtcctcttctgatgaa
ggatcttatgaagataataaaaaaaagagtagaagaggatccactaaggaaagcaaaaag
ggtaacttaaaagagaaaaagagaatttctaaaaagcagaaggatgatcttacatcatct
tcatcagatgaagaagagaatgatgaccagaagtcaacaggggatgggagcagtgatgag
cagaagattgtgccagtgacagaagatttaatgatgtccttcaacacaggattttgtcag
tcctcaggagatgaaggagagactaaatctggggctgttccaatggaggaggaggaagat
gatgacgatcctgagaatagaattgccaagaaaatgcttttagaagaaatcaaagccaat
ctttcctctgatgaggatgcatcttcagatgaagagccagatgaaggaaaaaagaaaact
ggaaagcaaaatgaaaacacaggagatgacgaggaaaatgaaaaggaagagaattctgaa
tcagattcagatgatgaagaatcaaagaaacctagatatagacacaggctgctgagacat
aagctaactgtgagtgacggagaatcgggggaagaaaagaagggaaaatctaaagaccct
aaagaaggcaaacacagaaatagaaggaaagtgagcagcgatgactcaaatgactcagag
tttcatgaatctgaagttagtgaagaagttagtgagtctgaagatgaccagcgtcgtaga
acaagatcttctaagaaagccgaggcagaagaaaaccgcagttacaagcaaaaaaagaaa
aggcgacgcattaaagttcaggaggattcctccagtgaaaacaagagcaactctgaggag
gaagagaatgatgattcaaaatctcctggaaaaggcaggaagaaaatcagaaagattatt
aaagatgataagcttagaacagagacacaaaatgcattgaaagaggaggaagaaagaaga
aaacgtattgcagaaagagagcgagagagagagaaactgagagaggtgatagaaatagaa
gatgcttcacctctgaagtgtcctattacaaccaaactggttttagatgaagatgaagaa
accaaagaaccattggtgcaggttaacagacatatagttactaaactgaaaccacatcaa
gtagatggtgttcagttcatgtgggactgttgttgtgaatctgtgaaaaaaacaaagaca
tctccaggctctggatgcattcttgctcactgtatgggtctagggaaaactttgcaggta
gtgagttttctccataccgttctgttatgtgacaagctggatttcagcactgctcttgta
gtatgtccattgaacacagctttgaactggctcaatgagtttgaaaaatggcaagatggt
ttagaagatgatgagaaattagaggtctgtgaattagcaactgtgaaacgccctcaagag
agaggctacatgctgcaacgatggcaggaagaaggaggtgttatgatcataggctacgaa
atgtatcgtaatcttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatattt
aacaaggctctggttgatccaggccctgacttcgttgtgtgtgatgaagggcatatatta
aaaaatgaagcttctgctgtttctaaagctatgaatgcgatacgatccagaagaaggata
attcttacaggaacaccactacagaataaccttatagaatatcactgcatggttaacttt
atcaaggagaacttgcttggatcaattaaggaattccgaaatcgttttataaatccaatc
cagaatggtcagtgcgcagattctacccctgttgatgtaagagtaatgaaaaagcgtgca
catattttatatgaaatgttagctggatgtgttcagagaaaagattacactgcattaact
aagttcctgccaccaaaacatgagtatgttcttgcagttagaatgacgcctcttcagtgt
aaactctatcagttctacttggatcacttaacaggtgtaggtagcagcagtgaaggtgga
agaggcaaagctggaactaaactatttcaggacttccagatgttaagtagaatctggact
cacccttggtgtttgcagctggactatattagcaaagaaaataagggctattttgatgaa
gatagtctggatgactttattgcttcagattctgatgaaacttcaatgagtttaagctct
gatgattatgcaaagaaaaaaaaatccaaggggaaaaaagcaaagaaagagagcagctca
agtggcagtggcagtgataatgatgttgaagtgattaaagtttggaattcaaggtctcgt
ggaggtggagaaggaaatacagaggaccttgcaaatgcccctgctattcctataaaatca
gaggagggtaaagccacatcttcttccaacccaggaagcccagctccagactggtataag
gattttgtcactgatgcagatgctgaaatattggagcattctgggaaaatggttcttctc
ttggaaatacttcgtatggcagaggaacttggtgacaaagttctagtttttagccagtct
ttaatatcactggatttgatagaagactttcttgagctggccagcacagagaaaactgac
aaagagaaacctatttataaaggtgaaggaaaatggttcagaaatattgactactatcgt
ttagatggttcaactacagctcagtctagaaagaaatgggctgaagagtttaatgacgaa
actaacgtgagaggccgtttgtttattatttccactaaagcaggttctcttggaataaac
ctagtggctgctaatcgtgtgattatctttgatgcctcttggaacccatcctatgatatc
cagagtatctttagggtttaccgctttgggcaaaacaaacctgtgtttgtgtacaggttc
ctagctcagggaacaatggaggacaagatctatgatcgccaagtaacaaaacagtcactg
tctttccgggtggttgaccagcagcaagttgagcgtcacttcaccatgaatgagctcacg
gagctctatacttttgagccagatttgctggatgaccctaattcagaaaagaaaaagaag
agggacacacccatgctgccaaaggatacaattttggcagaattgcttcagatccataaa
gaacacatagtgggctaccatgaacatgactcactcctggaccacaaagaggaagaagaa
ttgactgaagaagaaaggaaggcagcttgggcagagtatgaagctgagaagaagggtctg
accatgcgtttcaacatgccaactgggaccaatatgccccatctcaactacaacactcaa
accccatatattcctttcaatctgggagctttgtcagcgatgtctaaccagcagctggag
gacctcattaatcaaggaagagagaaagttgtagaagccaccaacagtgtaactgcagca
agaattcagccccttgaagatattatctcagctatatggaaggataatatgaccctgacg
gagagccaggtacaggctttggccctaagtagacaggcaagccaagagctggacgtgaag
cgcagagaagccttgtacaatgatgtcctgacaaaacagcagatgttaatcagttgtgtt
cagaggatacttatgaacagaagactacagcagcagtacaatcagcagcaacagcagcaa
atgtcttatcaacaagcagcaatgagtcatcttatgatgccaaagcctccaaatttaatt
atgaatccttccaactaccaacaaatagatatgagaggaatgtatcagtccgtttcgggt
ggtatgcagccaccgccactgcaacgtgcaccacccccaatgagaggcaaaaatccagga
ccttcccaagggaaataa
DBGET
integrated database retrieval system
