Crocodylus porosus (Australian saltwater crocodile): 109313718
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Entry
109313718 CDS
T07440
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109313718 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109313718 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109313718 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109313718 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109313718 (COL4A5)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109313718 (COL4A5)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109313718 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109313718
NCBI-ProteinID:
XP_019395968
Ensembl:
ENSCPRG00005008831
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MRLAARSPGASLAAGCLLLLGLCGRAADAAACHGCTSSSKCDCGGVKGEKGERGFPGLEG
QPGLPGFPGPEGPPGPRGGQGDDGLPGPVGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPG
PPGIPGCNGTKGEHGFPGSPGFPGLQGPPGPPGFPGMKGEPGEIIMSSLPGQKGDPGFPG
LPGIPGPPGPIGTSGPIGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGERGLQGP
PGPPGQIGEQKRPNDVEFQKGDQGAPGERGPPGPPGPQGPPGPPGGMKGEKGEPGEPGKR
GKPGKDGEPGQPGRNGSPGEPGINGEPGRDGEKGEKGESGLPGAPGRIISRPGNGATVGP
KGSKGLSGLPGSKGERGYPGLPGPPGLPGPPGITTPGPPGSPGLPGERGQKGDQGLPGIS
IPGQPGLDGQPGLPGPPGPPGRPGSAVPSRNGLCEPGAPGPPGPPGDQGFTGEQGQKGDK
GDTCFNCIGNGISGPPGERGPFGPPGSPGPPGFPGPKGEKGLPGLAGLEGQRGFPGPPGA
PGRPGPKGDPGDILAFPGMKGEKGDPGFPGPPGLPGIDGSPGRDGLPGLPGPKGESGSVV
FKGEMGPRGDPGVPGLSGERGPMGPPGFGPQGPPGEKGIQGVSGRPGPPGVPGPKGEPGQ
TLTEQGVPGAPGPPGRNGEPGLPGDPGQPGQPGLPGIPGAKGEPGLPGIGLPGPPGPKGF
PGVPGPPGAPGSPGRPGLDGPPGQPGFPGQKGERGFGVPGPPGPPGPVGPKGLLGPKGDP
GFPGSPGLPGRAGFDGAPGPKGDPGPSGSAGLPGPPGFPGIGGQGPPGPPGPPGPSGPSG
DPGPQGVPGEKGDPGPPGFDIPGPPGDRGVPGFPGPPGLLGPPGPPGPPGRDGIPGFAGA
KGEMGVMGAPGPQGPPGIPGRNGLPGPKGNDGLPGQPGSPGFDGLKGVKGETGLPGAPGK
VDPSQLGSKGEKGEPGVPGISGIPGQKGYQGLPGDPGPPGLNGQSGAPGLPGLKGEPGLP
GQPGLTGPPGPKGAMGEMGLPGPQGIKGSQGTAGRPGPPGPPGFPGLKGEKGDPGLSDIG
IPGLPGPKGDPGLPGYPGSPGSKGVAGNPGLPGLPGSAGAKGEPGLPGFSGTPGIPGPKG
IDGPPGNPGLPGSPGPSGDVGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPGP
PGLPGLSGQKGEMGLPGPPGVPGRPGLKGEPGFQGFPGPQGPAGLPGPPGPPLEGPKGGP
GPQGIPGASGPSGPPGPPGPEGPRGPPGSGGLQGEKGNPGPPGQPGLPGLKGDQGPHGRQ
GDPGRPGLNGMKGDPGVPGVPGFPGMKGPIGPPGPVGLTGSQGPAGPPGPPGLPGPTGQT
IVYKGDPGPPGAPGQPGSKGPPGLPGPQGLPGPIGFPGDAGRDGLPGFDGPAGRKGDKGL
PGHPGSRGTQGPPGPDGLQGPPGPPGAASVAHGFLITRHSQTTDAPLCPQGTARLYDGFS
LLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEQMPMS
MDPLTGKSIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPLGWDSLWIGYSFMMHTSAGAE
GSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEMSEMFSKPQSETLKA
GDLRTRVSRCQVCMKRT
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggctgcacggagccccggggccagcctggcagccggctgtctgctgctgctg
gggctgtgcgggcgggctgcggacgccgcggcttgccatggatgtacatcatcatccaaa
tgtgactgtggtggtgtcaaaggtgaaaagggtgagaggggattcccaggtttagaaggt
cagccaggtttacctgggtttccaggaccagagggaccccctggccctagaggtggacag
ggtgatgatggacttccagggcctgttggacccaaaggaatcagaggacctccaggactt
ccaggatttccaggaacaccaggacttcctgggttaccagggcaagatgggccaccagga
cccccaggtatcccaggatgcaatggaacaaagggagaacatggattcccaggaagtcca
ggttttccaggtttacaaggccctcctggaccccctggctttccaggtatgaagggtgaa
cctggtgaaataattatgtcctcgcttccaggacagaaaggtgacccaggattcccaggt
cttccggggataccaggtccacctggtcccattggtacgtcaggcccgattggtcctcct
gggccaccaggtttgacgggccctcctggtccaccagggcttccaggacctaagggtaat
atgggattgaattttcaaggacccaagggtgaaaagggtgaacgaggccttcagggacct
cccggacctccaggacaaataggagaacagaagagaccaaatgatgttgagttccagaaa
ggagatcagggtgcaccaggtgaacgcggtccaccaggaccccctgggccacaaggtcct
cctggtccccccggtggcatgaaaggcgaaaaaggtgagccaggagaaccaggcaaaaga
gggaaacctggcaaagatggagaacctggccagcctggtagaaacggttcacctggagag
ccaggtataaatggggagccaggaagagacggggaaaagggtgagaagggtgaaagtggt
ctgcctggtgctcctggaaggatcatttcaagaccaggaaatggtgcaacagtgggacca
aaaggtagcaaaggattgtcaggtcttccaggctccaaaggggaacgcggatatcctggc
ttgcccggtcctccgggattgccaggtcctccaggaatcacaactcctggccctcctggc
tcacctggattgccaggtgagagaggtcagaagggagatcagggtttaccgggaatttcc
atacctggacagcctggactcgatggacaacctggactacctggaccgccaggtccccct
ggacgtcctggatcagctgttccttctcgaaatggattatgtgagccaggggccccgggt
cctccaggtcctccaggagaccaaggctttacgggggagcaaggccagaaaggtgataag
ggagatacatgcttcaactgtataggaaatggcatatcagggcctcctggggagagggga
ccgtttggacctccaggtagcccaggacctcctggtttccctggaccaaaaggtgaaaaa
ggacttcctggcttagccgggctggaagggcaacgaggatttccaggacctccaggtgcc
cctgggcgacctggtcccaaaggggacccaggggacatcctcgcttttccaggaatgaag
ggtgaaaaaggagaccctggtttcccaggacctccaggtcttcctggtatagatgggtct
cctgggcgagatggactgccaggtcttcctggacccaaaggggagtctggtagtgttgtc
ttcaaaggggaaatggggcctcgaggtgatccaggagtaccaggtctttctggagagaga
ggacctatgggacctcctggttttggccctcaaggtccaccgggtgaaaaaggcattcaa
ggtgtatccggtcgtccaggccccccaggagttcctggtccaaaaggtgaacctggtcag
actcttacagaacaaggagttccaggtgcccctggtcctcccgggagaaatggtgaacca
ggtcttccaggtgaccctggtcagccaggtcagcctggcttaccaggtatcccaggtgca
aagggagagccaggtctgcctggcattggacttccaggcccaccggggccaaaaggtttc
cctggagtgcctggtccccctggtgcaccaggaagccctggacgacctggtctagatggg
ccacccggacagcctggtttcccaggacagaagggggaacgtggatttggtgtcccagga
cccccaggacccccagggccagtgggtccaaaaggactactgggacccaaaggggatcct
ggctttccaggaagccctggtcttccaggacgggcaggttttgatggagctccagggcca
aaaggtgaccctggaccaagtggatcagcagggctcccaggtccaccaggtttcccaggc
attggtggtcaaggtccacccggaccacctggacctccaggaccttcagggccatcaggt
gacccaggaccccagggtgttccaggggagaagggggatcctggtcccccagggttcgac
attcctggtcctccaggtgacagaggtgttccaggatttcctggacctcctggtcttctg
ggtccaccaggtccaccaggtccaccaggacgggatggaataccaggatttgcaggtgcc
aaaggtgagatgggtgtgatgggagctccaggtccacaagggcctcctggcattcctgga
cgaaatggccttcctggccccaaaggcaatgatggtttaccaggtcagccaggatcacct
ggatttgatggactcaaaggtgtcaaaggtgaaacaggcctcccaggtgcccctgggaag
gttgatccaagtcagctgggatcaaaaggagagaagggtgagccaggtgtcccaggcatt
tctggaataccaggtcagaaaggttatcaagggctccctggtgacccagggccacctggc
cttaatgggcaatcaggtgcaccaggattaccaggcctgaaaggagagcctgggctgcca
ggacaaccaggactaacaggccctccaggaccaaaaggtgccatgggagagatggggctt
ccaggtccccaaggtattaaaggctcccaaggaacagcaggacgccctggcccacctggt
cctcctggatttcctgggttaaagggagagaaaggtgacccagggctttcagacattggc
atcccaggcctccctggtcccaagggggatcctggtttgcctggataccctggtagccct
ggcagcaaaggagtagctggaaatcctggtttgcctggattgccaggcagtgctggtgca
aaaggagaaccaggccttcctggattttcaggaacaccaggaattccaggaccaaaagga
attgatggacctccaggtaatcctggtctgcctgggtcgcctgggccatcaggtgatgtt
ggccgccctggccctccaggtcctccaggagagaaaggacaaccaggtcgagatggtatt
cctggaccagctggacagaagggtgaaccgggtctcccaggttttgggcgcccaggacct
ccaggactcccaggattatcagggcagaagggtgaaatgggattgcctggtcctccagga
gtccctggacgtccaggtctaaagggtgaaccaggtttccagggattccctggtcctcaa
ggtccggcaggtctaccaggcccccctgggccacctctggaaggtcctaaaggtggtcct
ggcccccaaggcataccaggagcatcaggtccctcaggtcctccaggtcccccaggtccg
gaaggtccccgaggaccccctggaagtggaggacttcaaggggaaaaaggaaacccaggt
ccacctggccagcctggcctgcctggtctaaaaggagatcaaggaccccatggtcgtcag
ggtgatcctggtcgtcctggtctgaatggaatgaaaggtgaccctggggttccaggcgtt
ccaggttttccaggtatgaaggggcccattggacctccaggaccagtcggccttacaggt
agtcagggcccagcaggcccaccaggtccaccaggtttacctggccccactggacaaacc
attgtatataaaggtgatccaggtcctccaggtgctccaggccaacctggatccaaaggg
ccacctggattgccaggcccacaaggacttccaggcccaataggatttcctggggatgct
gggcgagatggacttcctgggtttgatggtccagcagggcgcaaaggtgacaaaggactt
cctggccatccaggttcacgaggtacacaggggccccctggtccggacggcttgcaaggc
ccaccaggtcctcctggagcagcctctgttgctcatggattcctgataactcgacacagc
cagacgacagatgcgccattgtgcccacaaggaacggcaaggctgtatgatggattttcc
cttctctacgtccagggaaatgagagagcccatggccaggacttgggcactgccggtagc
tgtctgcgcaggttcagcaccatgcccttcatgttctgtaacatcaacaatgtttgcaat
tttgcatcaagaaatgactattcctactggctatccactccagaacaaatgcccatgagc
atggacccactgactgggaagagcatccagccattcattagccgatgcgtagtatgtgaa
gctccagccatggtcatagcagtccatagtcagaccattcaaataccatcgtgtccacta
ggatgggattctctttggattggttattctttcatgatgcacacaagtgcaggtgcagag
ggctctggacaggccttagcatctccaggatcctgtttggaagaatttcgctcagcccct
tttatcgagtgtcacggtcgtggtacttgtaattactatgccaactcgtacagtttctgg
ctggcaactgtagagatgtcagaaatgtttagtaaacctcagtcagagacactgaaagct
ggagacctgaggacacgtgttagccgttgtcaagtttgtatgaagaggacgtaa
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integrated database retrieval system
