Crocodylus porosus (Australian saltwater crocodile): 109313839
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Entry
109313839 CDS
T07440
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109313839 (CACNA1B)
04020 Calcium signaling pathway
109313839 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109313839 (CACNA1B)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109313839 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109313839
NCBI-ProteinID:
XP_019396152
Ensembl:
ENSCPRG00005012108
LinkDB
All DBs
Position
Unknown
AA seq
2258 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKG
SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAIVMFAIIGLEFYMGKFHKTCFSNETGEEVGDFPCGEELPARQCESG
STCRKYWQGPNYGITNFDNILFSVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVML
AEEDKNAEEKSPLDVLKRATIKKSKNDLIHAEEGEDHFTDICSVGSPFARASLKSGKNES
SSYFRRKEKMFRFFIRRMVKAQSFYWIVLCVVTLNTLCVAMVHYAQPEKLTTALYFAEFV
FLGLFLTEMSLKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWAAVKPGTSFGISVLRAL
RLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDE
TPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHSGMFSCVYFIVLTLFGNYTL
LNVFLAIAVDNLANAQELTKDEEEMEEATNQKLALQKAKEVAEVSPISAANISIAAFVKQ
TRGTVSRSSSVSSVNSPKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYNELDPEERVRY
ATTLHIRPDMKTHLDRPLVVEPRTEGRNNVNKLSPGDVQEIEQTKTISAECAEAPRKHHR
HREKDKTGEQEKSDMTKDENGESGTNNKEERQRQHRSRSKEAEGSSKEGKIERSRGQEGG
KRHHRRGSVEEGAEKEHRRHRTHRHSAERQGKEGNGTINGARTERRSRHRGGSRSGNREG
DPGSKGENGEEPHRRHRIRNRALSTYDPAEKENGEKEGDVGEKDHRNHQPKENQCEIEAG
ASVSVVPVQTLPSTYLQKVPEQPEDADNQKNVTRMTQPPLDKTTTVNIPVTITAPPGETT
VIPMNSVEFESKTEEKKDVDGDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNLRYF
EMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLLHPG
SYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVF
DCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDYEKS
EVEAKPRQWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYRMEM
SIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPLTRY
MPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIVFTS
MFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRLFRA
ARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDDSSI
NRHNNFRTFLQALMLLFRSATGEGWHEIMLSCLSNRACDPRSGLTKDECGSDFAYFYFVS
FIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDPAACGRISYTDMY
EMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISDQDLTVHFTSTLMALIRTALEIKLASG
GVKQHQCDAELRKEISLVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNS
REQVHQPPGGLCQTGPVSLFHPLKATLEQTQPPAFNNAKAFLRQKSSASLNNGGTLPAPE
GGIKESSSWGTQRTQDIFYETRMPAFERGHSEEIPIERTSKQVVEMREISPTLANGEHQP
GLESQGRAASMPRLAAETQPIPDTSPMKRSISTLTPQRPHPMHLYNYSLERMPPDQVHHH
HHHRCHRRKEKKQKSMDRPSHHLADGDAVAQPGETSSRDRKQERGRSQERKQHSSSSSEK
QRFYSCDRYGSRDHSQPKSADHSRPTSPNGGPEQGPHRQGSGSVNGSPLMSTSGASTPCR
GRRQLPQTPLTPRPSITYKTANSSPVHFTSFQTGLPTFSPGRLSRGLSEHNALLRGDSQN
HSHTMVARIGSDPYLGHRDDSDSPYRVVPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSH
QIRRVPNGYHYTLGLNTGPGTGSRGRSYYHEADEDDWC
NT seq
6777 nt
NT seq
+upstream
nt +downstream
nt
atgattttagccaccattatagccaactgtattgtgcttgctttggagcagcatctacca
gatggagacaagacacccatgtcggagagactggatgacactgagccgtactttattgga
atattttgttttgaagctggtataaaaatcatcgctctggggtttgtttttcataaaggc
tcttacctccgaaatggctggaatgtgatggattttgttgtggtcctcacaggaattcta
gccactgctgggactgactttgacctacggaccttgcgagccgtccgagtattgagacca
ctgaagcttgtgtcaggaatcccaagtttacaggttgtcctcaagtccatcatgaaggct
atggtgcccttgcttcagatcgggctgcttctattctttgctattgtgatgttcgccatt
atcggactggagttctacatggggaagtttcataaaacatgcttctccaatgagacaggt
gaggaggtgggagatttcccctgtggagaggagcttccggccaggcaatgtgagagtgga
agcacatgcaggaagtactggcaaggccccaactatggaatcaccaactttgacaatatc
ctgttttccgtgttaactgtcttccagtgtatcaccatggaaggctggactgacatcctc
tacaacaccaatgatgcagcaggaaatacctggaactggctctacttcatccctctcatc
atcattggctctttcttcatgctcaacttggtgctgggcgtcttatcaggtgaatttgcc
aaagagcgtgagagggtggaaaaccgccgagcctttctgaagctccgtaggcagcagcag
attgaacgagagctaaatgggtacttggaatggatctttaaggcagaagaggtgatgctg
gcagaagaagataagaatgctgaagagaagtcccctctggatgtgttgaaaagagctacg
ataaagaagagcaaaaatgatctgattcatgctgaagaaggtgaggatcatttcacagac
atttgctctgttgggtctccatttgctcgtgccagtctgaagagtgggaagaatgaaagt
tcttcatatttccggaggaaagagaagatgttccggttctttatccggcgcatggtgaaa
gcacaaagcttctattggatcgtcctctgtgtcgttactctgaacaccctgtgtgttgcc
atggtgcattacgcccagccagagaaactcaccactgctttgtattttgcagagtttgta
ttcctgggtctgttccttactgagatgtccttgaagatgtacggactggggccaagaaat
tatttccactcctcattcaactgctttgactttggggtgattgtggggagtatttttgaa
gttatctgggctgcagtgaagcctggtacctcatttggcatcagtgtattgagggctctt
cgactgctgaggattttcaaagtaaccaaatattggaactccctgagaaacctggtggtg
tccttgctgaactccatgaaatccatcatcagtttgctcttcctgctgttcctgttcatc
gtcgtgtttgctttgctggggatgcagctctttggaggacagtttaattttcaagatgaa
acacctaccacaaactttgatacttttcctgctgccatcctcactgtgtttcagatactg
actggtgaagactggaacgcggtgatgtatcatgggatagagtcacagggcggtgtccac
tcaggaatgttctcttgcgtttacttcatcgtcctgacattgtttggtaactacacactc
ctgaatgtcttcctggctattgctgttgacaatcttgcaaatgcacaagagttgacaaag
gatgaagaggaaatggaagaagctacaaatcaaaagcttgctcttcagaaggccaaggag
gtagcagaagtcagtcccatatctgctgctaacatttccatagcagcttttgtaaagcaa
actcgaggtactgtatctcgcagctcgtcagtctccagcgtaaattcacccaagcagcag
aactcctccaaatccaagtctgtttgggaacagaggaccagccagatccgaatgcacaat
ttccgagccagctgcgaggcactgtacaatgagctcgacccagaggagcgggtgcgctat
gccaccaccctacacatccgaccagacatgaaaactcatttggatcggcctctggtggta
gagccaaggactgaaggtcggaacaatgtcaataaactaagccctggagatgttcaggag
attgagcagaccaagaccatctctgccgagtgtgcagaagctccacggaaacatcaccgg
catcgcgagaaagacaagacaggagagcaagagaagagcgacatgaccaaggatgagaac
ggggaatctggcacaaacaacaaagaggaacgacagaggcaacacaggagccgcagcaaa
gaagcggaggggagtagcaaggaagggaaaattgagcgcagcagaggccaggaggggggg
aagaggcatcatcgccgtgggtcagtggaggaaggggctgagaaggagcaccggaggcat
cggactcaccggcactcagctgagcggcaaggcaaggaaggcaacggaacaatcaatggt
gccagaacggagcggcgttcacgtcaccgaggtgggtcaagatcggggaatcgagaagga
gatccaggctcaaaaggagagaatggggaagagcctcacagacggcacagaatccggaac
agagctctgtcaacctatgacccagcggagaaggagaacggggaaaaagaaggagatgtt
ggggaaaaggatcataggaaccatcagccaaaggaaaaccagtgcgagatcgaggctggg
gcgagtgtcagtgtcgtcccggtgcaaacccttcccagcacatacctgcagaaagtgcct
gaacagccggaagatgctgacaatcagaagaatgtgactcggatgactcagccgccgctg
gacaaaaccaccactgtgaacatccccgttaccatcactgcaccaccgggggagaccacc
gtcataccaatgaacagcgttgaatttgaaagtaaaactgaagagaaaaaagatgtggat
ggtgatgacttgacaaaaaatgggccgaagccaatcctgccttacagctccatgtttatc
ttgagtcctacaaacccaatccgacgcctgtttcattacattgtgaacctgcgctacttt
gagatggtcatcctcatagtcatagcactaagcagcattgctctggcagctgaagaccct
gtccaagctgagtcaccaaggaacgacgctctgaagtatctggattacatatttacgggg
gtctttacttttgaaatggtgataaagatgattgacttgggtctgctgcttcaccctggc
tcctatttccgtgacctgtggaacatcttggactttattgtggtcagtggggccttggtg
gcatttgccttctcaggaaccaaaggcaaggatatcaacaccatcaagtcactgcgagtt
ctgcgggtgctaagacccttgaagaccatcaagcgtctgccaaagttaaaggcggtcttt
gactgtgtagtaaattccttgaagaatgtcctcaatatcctgattgtttacatgctcttc
atgttcatctttgctgtcattgctgtgcaactcttcaaaggcagattcttctactgcaca
gatgagtcaaaggaactagagaaggactgcaggggtcaatacctggattatgaaaagagt
gaggtggaggcaaagcccaggcagtggaaaaaatatgagttccactatgacaacgtgctt
tgggctctgttgacactattcaccgtctccacgggagaagggtggccaactgtattgaag
cattcggtggatgctacatatgaggaacaaggtcccagccctggctatcgaatggaaatg
tctatcttctatgtggtgtactttgttgtcttcccttttttctttgtgaatatatttgtg
gcactgatcatcatcaccttccaggagcaaggagataaagtgatgtcggaatgcagccta
gagaaaaatgagagggcctgtatagacttcgccataagtgccaaaccactgacccgctac
atgcctcaaaacaagcagtcttttcaatacaagatgtggaagtttgtggtgtcccctccc
tttgaatattttatcatggtcatgattgcactcaatacaattgtgctgatgatgaagttc
tatgatgctccagaagcatatgaagaaatgctgaaatgcctgaatattgtgtttacatct
atgttttcaatggaatgtgtgttgaagatcattgcctttggtgtactgaattatttccga
gatgcttggaatgtttttgattttgtaacagtattgggaagtattactgatattttagta
acagagattgcggacacggacaactttatcaacctcagcttcctgcggctcttcagagca
gcaagactcatcaagctccttcgccaaggctacaccatccgcattctgctctggacattt
gtgcagtcttttaaggcattgccttatgtgtgtctcctcattgcgatgctcttcttcatc
tatgccattattggcatgcaggtatttggaaacattgcactagatgatgattcctcaatt
aatcgacacaataacttcagaacattcttgcaagccctgatgctactgttcaggagtgct
acaggggaaggctggcatgagatcatgttgtcatgcctcagtaacagagcctgcgatcca
cgatctggcctcaccaaagatgaatgtggaagtgactttgcctatttttactttgtctct
ttcatcttcctctgctcctttctgatgttgaacctgtttgtggctgtaatcatggacaac
tttgagtacctgacacgagactcttccatcctaggaccccatcacctggatgagtttgtt
cgtgtctgggctgaatatgacccagctgcctgcgggcgcatcagttacactgacatgtat
gagatgctgagacacatgtccccacctctaggcctgggaaagaaatgccctgctcgagtt
gcttataagcgccttgtgcggatgaacatgccgatctcggaccaggacttaacggtccat
ttcacatccaccctcatggccttgattcggacagctctagagatcaaacttgcttcagga
ggggtgaaacagcaccagtgtgatgctgaactaaggaaagagatctcactggtttggcct
aatctgtcccaaaagacactggatctattggtgcctcctcataaacctgatgaaatgacc
gtggggaaagtctatgcagcgctcatgatatttgatttctacaagcagaataaaaacagc
agggagcaagtgcatcaaccacctggaggcctttgccagactggaccagtgtcactgttt
caccctttgaaagccacgcttgagcaaacccaacctccagcattcaacaatgctaaagcc
tttcttcgtcagaaaagttctgcatcactcaacaacgggggcacgttgccagctccagag
ggtgggatcaaggagtccagttcatgggggactcagcgcacgcaagacatattttatgaa
accaggatgccggcttttgagcgaggccactcagaagaaattcccattgaacggacaagc
aaacaggttgtagaaatgagagaaatcagccccaccttggccaatggagagcaccaacct
ggcctggagagccagggacgggcggcttccatgccacgtctggctgccgaaactcagccc
atcccagacacaagccccatgaagcgctccatctccacattgacaccacagcgtccgcac
ccaatgcacctgtacaactattccctggagcgcatgccaccagaccaggtccaccaccac
catcaccatcgctgccatcgacggaaagaaaagaagcagaagtccatggataggccctcc
caccacctggctgatggagatgcggtggcccagccaggagagacttcatccagggatagg
aagcaggaacgtggcaggtcccaagagaggaagcagcactcctcctcttcctctgaaaaa
caacgcttctactcctgcgaccgctatgggagccgggaccattctcagcccaaatctgcc
gatcatagccggcccacctcacccaacgggggaccagaacaagggcctcacagacagggt
agtggttcagttaatgggagccccttgatgtcaacatctggtgctagcaccccgtgccgt
ggtcggaggcagctcccgcagactccattgacccctcgccccagcatcacttacaagacc
gctaactcctcgcccgtgcacttcaccagtttccaaaccggcctgcccactttctccccg
ggacgcctgagccgtggcttgtctgagcacaatgctttactgcgtggggactcccagaac
cactcacacaccatggtggcccgcatcggttctgacccttaccttggacaccgagatgat
agtgacagtccataccgtgttgttccagaggacacgctcacctttgaggaggctgtcgca
accaattcaggaaggtcctcaaggacttcttatgtctcgtccttgacttcccagtctcac
caaatccgcagggttcccaatggctaccactacacattgggcctcaacacaggccctggg
acaggctccagaggacgcagctattaccatgaagctgatgaggatgactggtgctag
DBGET
integrated database retrieval system
