Crocodylus porosus (Australian saltwater crocodile): 109314223
Help
Entry
109314223 CDS
T07440
Symbol
PRDM16
Name
(RefSeq) PR domain zinc finger protein 16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo00310
Lysine degradation
cpoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109314223 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109314223 (PRDM16)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109314223 (PRDM16)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
109314223 (PRDM16)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109314223 (PRDM16)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109314223 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-met
zf-H2C2_5
Zap1_zf1
DUF7128
zf-BED
C2CH-4th_BIRD-IDD
IgA0_D2
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
109314223
NCBI-ProteinID:
XP_019396794
Ensembl:
ENSCPRG00005012448
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPADFELRESSIPGAGLGIWAKKKIEAGERFGPYTTVQRNT
LKETNFGWEQMLTDPEGASQEGSIKKTTDELGNEKFCVDANQTGTGNWLKYIRVACSCDE
QNLAVCHINDQIYYKVIKEIEPGEELLVYMKEGAYSLGNMPPSMEEEHTFRCEDCDELFQ
SKLDLRRHKKYACNSVSSLYETLNEEIKQEGLSDGQVYECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFAPGLPLTPSSMMDKSKPSPNLNHASL
GFNDYFPSRPHPAGLPFSPAPPAFPTLTPGFPGIFPPSLYPRPPLLPPTSLLKSPLNHTQ
DAKLPSPLGNPALPLISAVSNSSQPVSGEEKCESNLENSYLDKLKARNSDMSDGSDFEDV
NTTTGTDLETTTGTGSDLDSDAESDREKVKDKSKQTESKPDFVGSSVSTSSVSNASEIPL
FYSQHSFFPPPEEQLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGGSSSESPFDLTTKPKEIKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMGSEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL
ESFAAMKADTGTSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR
HLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
KHEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQA
STLADKRPEIQDIDGSSQCHGLASEKAEDVDDEDEELEEEDDDSLTGKSQEETVSPTTEP
RGTFEDEEDEEPTSLTMSFDHTRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKD
VFNSTLDSETIKQTLYRQAKNQAYAMMMSLSENAPLHTSSQNSLDAWLNMAGAASESGTF
NPINHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactgcccaaaagtgatagcgagattgtaaataat
atgtacgagaccgatcccgatctcctggctggtgagagtgcagaggaggaaacagaggac
agtattatgtcccccatccctgtcggccctccatcaccttttcccaccagcgaggacttc
acccccaaggagggctcaccttatgaagctcctgtctacattcctgatgacattccaata
ccagcagattttgaactcagagaatcctcgattccaggggcagggctagggatctgggcc
aaaaagaagattgaagctggggaaagatttggaccttatacgacagtgcaaaggaacacg
ctaaaggaaacaaactttggatgggagcaaatgctgactgatcctgagggagcatcccaa
gagggcagtataaaaaagaccactgatgaattggggaatgagaaattctgtgttgatgct
aaccaaaccggaactggaaactggctgaagtacatccgagtggcctgttcctgtgatgaa
caaaatctagctgtgtgtcacattaatgaccagatctattataaagttattaaagaaatt
gagccaggagaagaactgttggtgtatatgaaggaaggggcttattcgcttgggaacatg
ccacccagtatggaagaggagcacacatttcgctgcgaagactgtgatgaactcttccag
tcaaagctggacctgaggcggcacaagaaatatgcctgcaactctgtcagctctctgtat
gagaccctgaatgaggagataaaacaggaaggcctcagcgatgggcaggtctatgagtgc
aaagactgtgagagaatgttccccaataaatacagcttggagcagcacatggtaatccac
acggaggagagggagtacaagtgtgaccagtgtccaaaggctttcaactggaaatcaaac
ctgattcgtcaccagatgtcacatgacagtggcaaacgctttgaatgtgaaaattgtgtg
aaggtgtttactgaccccagcaatctccagcggcacatccgttcccagcatgttggcgca
cgagctcacgcctgcccggactgcggcaaaacctttgccacttcatctggcctcaaacaa
cacaagcacattcacagtactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acacagttctccaacctgtgccgccacaaacggatgcatgcagactgtcgcactcagatc
aaatgcaaggactgtgggcagatgttcagcactacctcctctctcaacaagcaccggcgc
ttctgcgagggcaagaaccattacaaccctggggggatttttgcccctggtctcccttta
actccaagctccatgatggacaaatccaaaccctcacccaacctcaaccatgccagcctg
ggatttaacgattactttccatcccgaccgcacccagcgggtcttccattttcacctgct
cccccagcatttcccaccctcactccaggattcccagggatttttccaccctctctgtac
cctcggcctcccttattgcctcccacctcactgctcaagagtccactgaaccacactcaa
gacgcaaaacttccaagccccttggggaacccagccctgcctctgatttctgcagtgagc
aacagcagccagcctgtctcaggagaggagaaatgtgaaagcaacctagaaaattcctac
cttgacaagctgaaagccaggaacagtgacatgtcagatggcagcgactttgaggatgtc
aacaccaccacaggcacagatctggagaccacgaccggtactgggtctgacctggacagc
gacgcagagagtgacagggaaaaagtgaaggacaaaagcaaacagactgagagcaagcca
gactttgtcggcagttctgtgtccacaagttctgtcagcaatgcgagtgagatccccctt
ttctattctcagcactcgttcttccctccccccgaagagcagctgctgcctacgacaggg
gcagccaatgactctataaaagccattgcctccattgcagagaagtacttcgggcctggc
ttcatgggaatgcaggagaagaagatgggttccctcccataccattccatgttcccattt
cagttcctccccaattttccccattcactctatcctttcacggagcggaccctcaatcac
aacttgctggtcaaggctgaaccaaagtcacccagggaccttcacaaagtgggcggcagc
agctcagaatcgcccttcgatctcaccacaaaaccaaaagagattaagccaatcttgccg
ccacccaaggtcctgccagccccatcttctggggaggaacagccactggatctaagcatc
ggcaaccgcatccgtgccagccagaatggagggagggagccccggaaaaaccacatatat
ggggaaaggaagctaatgggtagtgaagtgctacccaagatttctcagtctcagctccct
cagcagccatccctgcattatgctaagccatcgccctttttcatggaccccatatacagc
agggtggagaagcggaaggtgacagacccagtgggtgccctaaaggagaagtacttgcga
ccctccccgctgctttttcacccccagatgtcagccatagaaaccatgacagagaaactg
gagagttttgcagccatgaaggcagacactggcacttctctgcagcccctcccacatcac
cccttcaacttccggtccccacctcccacgctgtcagatcccatcctgcgcaagggcaag
gagcgctatacctgcaggtactgtggtaagatcttcccacggtcggcaaatctgacaagg
catctccggacacacacaggggaacaaccctacaggtgtaaatactgtgacagatcattc
agtatttcctctaacctccagcggcacgtcagaaacattcataacaaggagaagccattc
aaatgtcacctgtgtaaccgatgctttgggcagcagaccaacctagaccgacacctgaag
aagcacgaacatgagaatgttccagtgagtcagcattctggagtcatcacaaaccacctt
gggaccagtgcctcctctccaaactcggaatccgacaaccatgcacttttagacgagaaa
gaggactcgtatttctccgaaatcagaaattttattgcaaatagtgagatgaatcaagca
tcaactttagcagataaaaggccagaaatccaagatatagatggcagctcccaatgtcat
ggattagcaagtgagaaagcagaagatgtggatgatgaagatgaagaactggaagaggaa
gatgatgacagcctgacagggaaatcgcaggaggaaacagtatcgcccacaacagagccc
cgaggaacatttgaggatgaggaggatgaagaacccacatccctcaccatgagctttgac
catacccgaaggtgtattgaggaggacgaagccggcttgttagatttggagcagatgccg
aattttgggaaggggctggatcttcgcaaagcagccgaggaagcatttgaagttaaagat
gtgtttaattccaccttagactctgagacaataaaacagactctgtacaggcaggctaaa
aaccaggcttatgcaatgatgatgtccctttctgagaatgctcccctccacacttcctcc
cagaattctctggatgcttggttgaacatggcaggagcagcttcagagtcggggaccttt
aaccccattaaccacctctga
DBGET
integrated database retrieval system
