Crocodylus porosus (Australian saltwater crocodile): 109314382
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Entry
109314382 CDS
T07440
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109314382 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109314382 (TAF4B)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109314382 (TAF4B)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109314382 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
109314382 (TAF4B)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109314382 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Spt46
Motif
Other DBs
NCBI-GeneID:
109314382
NCBI-ProteinID:
XP_019397113
Ensembl:
ENSCPRG00005014526
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
GAAGPKLPPAQVVAPKAPQTPTIQLPANFQIPPGTVLIRSSNGQLMLVSQQAIARAQSQT
QNNTSARPSIPTSTPAVRICTVQNPGTQLLKKVIATPVKTVLQTTNSVTSTVQRPAVVQP
AAVTASATTITVVKPSTTGASVKPPITGLPAQPITQKAASVKAESVTVAQANPSTEMLEN
VKKCKNFLATLIKLASSGTQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYIELKSSPQPY
LVPFLKKSLLALRQLMPNAQSFIQQCMQQQSPTQEAVSTQISSATTSTVPVTTSAVATTC
PQPTKSVLSSTVVTASQAVKPVLSAAVVRAPPTVSLQTMKPVLASAPVTATLQPANPIFT
STVATTPLTTIHVVKPVFTSSVAANSLQAVKPTLVSTLKPVLASTVAATATTSLQSVKPV
IGTPISIKITQPNSLLAHSGSTQQAFKVKQLLVQQPSGGMGKPVATLPQTSLLTLQTPAN
KRMPLNALIQSNQFPAGSIVKQITLPGNKILSLPASPVQKNKIKENGTTSFRDEDDINDV
TSMAGVNLNEENACILATNSELVGTVIRSCADNPFLSSEVLQKKILNMGKRHDIMELNSD
VVNLISHATQERLRGLLEKLTVIAQHRVTNHKENSKYIVASDTRAQLRFLEKLDHMEKQR
KDEEEREMLLRAAKSRSNKEDPEQLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKK
RPLDSNIASGLEGLNGNGTALGSSGFSLTKQLLRPRITRVCLRDLIFCMEQEREMKHSLV
LYRAFLK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ggcgccgccggccccaagctgccccccgcgcaggtcgtggcgcccaaagccccgcagacc
cccaccatccagctccccgccaacttccagatcccgccaggaacagttctcatcagaagt
agcaatggtcagctgatgttagtatctcaacaagcaatagctcgagcacagagccagacg
caaaataatacaagtgcaagaccatcaatacctacaagcacacctgcagtcagaatatgt
actgtacagaatcctggcacccagttactaaaaaaagtcatagcaactcctgtgaaaaca
gtattgcaaaccacaaattctgtgacctctactgttcagagacctgctgtagtacagcca
gcagctgtaactgccagtgctactactattactgttgtgaagccttcaactactggagca
tctgtaaagcctccaattacaggactgcctgcacagcctatcacccaaaaggctgcctct
gtcaaagcggagagcgtaacggtagcacaggccaatccttctacggaaatgttagagaat
gtgaagaaatgcaagaattttcttgcaacattaataaagctggcatccagtggaactcaa
gccccagaaatggggcagaatgtgaagaatctggtacaaaatctattggaagcaaaaatt
gaaccagaagaatttacaaaaaaactatacatagaactcaagtcttctccacaaccatac
ctggtccctttcctcaagaaaagtctgcttgccttacggcagctgatgcccaatgctcag
agctttatccagcagtgcatgcaacagcagtctccaacccaagaagctgtgtctacccag
atctcttcagcaacgacttccactgttccagtgacaacatcagctgtggcaaccacctgt
cctcagcccacaaaatccgtcctttcttccacagtggtcacagcctctcaagctgtaaaa
ccagttctttctgctgcagtggtgagagcaccaccaacagtttcactccagactatgaaa
ccagtccttgcttctgctccagtgacagccactcttcagcctgcaaatccaattttcacc
tctacagtagcaacgacaccactcacaactatccatgttgtgaagccagtctttacctct
tcagtcgcagcgaactcgcttcaggctgtgaagccaactttagtatcaacgttgaagccg
gtcttggcctctacagtggcagctacagcaacaacctctcttcagtctgtgaaaccagtc
attgggactcctattagtattaaaattacacaacccaactctcttcttgctcattcaggc
agtactcagcaggcatttaaagtgaaacagctgctagtgcaacagccatcaggaggcatg
ggaaaaccagtggccacccttccacaaacctctctgctgactcttcagacgcccgctaat
aaaaggatgccactaaatgcgctaattcagtctaaccagtttcctgcaggttccattgtg
aaacaaatcaccctgccaggaaataaaattctgtcgcttccagcatctcctgttcagaaa
aataaaataaaagagaacggaacaacatccttcagagatgaagatgatatcaatgatgta
acttctatggctggggtcaaccttaatgaggaaaatgcatgcatcttggcaacaaattct
gaactagttggtacagtgatccgatcttgtgcagacaatccattcctctcctcagaggtg
ctgcaaaagaaaattttaaacatgggtaaaaggcatgacattatggaacttaactctgat
gttgtgaacttgatctcccatgctacacaggagagattacgagggctcctagaaaaactg
actgtaattgctcagcatcgagtgacaaaccataaggagaacagtaagtacatagtggcc
agtgacaccagagcacagcttaggtttcttgagaagctggatcacatggaaaaacaaaga
aaggatgaagaggaacgagaaatgttgttacgagcagccaagagtcgctccaataaagaa
gatccagagcagctgcgattaaagcagaaagctaaagagatgcaacagttggagctggca
cagatgcaacagagagaagccaacctcacggccttggcagccattggaccaaggaagaaa
agaccgctggattctaacattgcatctgggctggagggcttgaatggaaatggaacggct
cttggatcatctggttttagccttacaaaacagctgcttcgtccaagaataacacgtgtc
tgtctcagggacttgatattctgcatggaacaagagagggagatgaagcattctctagtc
ttgtaccgtgcttttctgaaatga
DBGET
integrated database retrieval system
