Crocodylus porosus (Australian saltwater crocodile): 109314532
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Entry
109314532 CDS
T07440
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109314532 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109314532 (EXOSC10)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109314532 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
AAA_lid_10
DUF4230
Motif
Other DBs
NCBI-GeneID:
109314532
NCBI-ProteinID:
XP_019397290
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MRVRQAGLGELDWAANPSPSAGQGRRLRPGPRELRGGRGVAWTQPRPLVGLALASSEKPR
AATSSPRVRTRQPAWRPKSRESILPPRDSTSKMAATAGGGGGGSAAKKSKTTTKNSGGAA
GEGTEPPGGGGDAVLPGFRDADSFAKYALGTVVAATKASNGLPQPGDEYDFYRSFPGFRA
YCETQGDRLLYCMSKLMQYHGCRSHIKDRSKVTELEDKFDLLVDSNDAILERVGILLDEA
AGVNKNQQPVLPAGLQLPETIVSSWNRKSAEAKRTKSETFRLLHAKNITRPQLKFGEKID
NSNTPFIPKLFVKPNALKPLPEALAKSRRERKERPEDLDVPAALADFLHQQRTQQTEQDM
FAHPYQYELEHFSPPDVVLEKPEPQMFRPLEETPCHFVSTLDELVELNEKLVNCKEFAVD
LEHHSYRTFLGLTCLMQISTRTEDFIIDTLELRSDLYILNEPFTDPAIVKVFHGADSDME
WLQRDFGLYLVNMFDTHQAARLLNLGRHSLDHLLKLYCSVDADKRYQLADWRIRPLPEEM
LHYARDDTHYLLYIYDKLREELWNKGNGKPTQLQVVWQRSRDICLKKYIKPIFSDDSYLE
LYRRQKKHLNTQQLTAFKLLYAWRDKLSRQEDESTGYVLPNHMLLKIAEELPKEPQGIIA
CCNPIPPVVRQQINELHLLIQQAREMPLLKSEAASVTKKGPLSNPEKPENHLFGPHDSSH
ITLDDPQNHLSLAPAPALKCGSLFSDGEESDSEGMLPDSTCLVATATISIFNEPDVEEGG
TEKNLTVAQQKARRIMESFENPFRMYLPAEQNPAHVSQSAKFDPSSKIYEISNRWKLMNQ
TQLQKEAKEEAKKKVAQQTAAREQAQKACKMAAENVVSVRQQAAQEQAGKKRERIASEPE
TELPKQEKKRPKASQQPEEQETPKEFTPFDYSKSDFKAFAGSSKSKQSSQFDPAKQAHTG
KKFGGANKLQQQAGNKSMSYLAGKTNRGSRHNWPKR
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaggcaggccggactgggagagctggactgggctgcaaacccctcccccagc
gctgggcagggcaggagactgcgccctggaccgcgggaactacgaggcgggagaggcgtg
gcctggactcagccccgccccttggtgggcctcgccctagcaagctcggagaaaccaagg
gcagcgacttcttctcccagggtgcgcacgcgccaaccagcatggcggcccaagtctcgc
gagagcattctaccaccgcgcgactccacgtccaagatggccgctacagctgggggtgga
ggcggcggcagcgcagcgaaaaagagcaagacgacgaccaagaatagcggcggcgcagcc
ggggaaggcacagagccgccaggaggcggcggggatgcagtgctgcctggtttccgggat
gccgactccttcgccaagtatgccctcggcacagtggtggctgctaccaaggcatctaat
gggcttcctcagccgggagatgagtacgacttctaccgaagctttcctgggttccgagcc
tactgtgaaacgcaaggagacaggctgctttactgcatgagcaaattgatgcagtaccac
ggctgtcgcagtcacatcaaagatcgcagcaaagtgacagagctggaagacaaatttgat
ttgttggtcgactccaatgatgcaattcttgaacgagtgggtattttactggatgaagca
gcgggagtgaacaaaaatcagcagcctgtcctgccagcaggactgcagctccctgagacc
atcgtttccagctggaaccgcaagagtgcagaagccaaaagaacgaagtctgaaaccttc
cggctgcttcatgccaagaatattactcgaccacaattaaagtttggggagaagatcgac
aattccaacactcccttcattcctaaactttttgtaaaacccaatgctctgaaaccactg
cctgaagcactcgccaagagcagacgggagcgaaaggagcgtcctgaggacttggatgtg
ccggctgcactggcggatttcctccatcagcagaggacccagcagactgagcaagacatg
tttgctcacccctaccagtatgaactggaacatttttctccaccagatgtagttcttgag
aaaccggagccccagatgttcaggcctcttgaggaaacgccttgccattttgtctccaca
ctggatgagctggtagaactaaatgaaaagcttgtcaactgcaaagagtttgctgtggat
ttggagcaccactcctatcggaccttcttgggattgacgtgtctgatgcagatctccacc
cggacagaggattttatcattgacacgctggagcttcggagtgacctgtacattctgaat
gagcccttcacagaccctgcaattgtaaaggtctttcacggtgcagattcagacatggaa
tggctacagagagactttggcttatacttggtgaacatgtttgatacgcaccaggctgcc
cgtctcctcaaccttggccggcattctctagaccatttgctgaagctctactgcagtgtg
gatgctgacaagcggtaccagctggctgactggcggatacgccctttgccagaggagatg
ttgcattatgcccgggatgacactcactacctgctctacatttatgacaagctgagggag
gagctgtggaacaaaggaaatggaaagcccacacagctccaggttgtgtggcagcggagc
agggacatctgcttgaagaaatatatcaaacccatcttctcagatgactcctatcttgag
ctctacaggagacagaaaaagcatctcaacacacagcagctaactgcctttaagcttctc
tatgcctggcgggacaagctatcgcgccaagaggacgagagtacagggtatgtgctgcca
aaccacatgctgctgaagatagcagaagagctgccgaaagaaccccagggcatcattgct
tgctgcaacccaatcccacctgtagttcgccaacagatcaatgaactgcatctccttatc
caacaagcccgagagatgcctctgctcaagtctgaagcagcttcggtgacaaagaaggga
cctctctccaatccagagaagccagagaatcacttatttggacctcatgacagttcccac
attaccctggacgatccccagaaccacttgtcattagcacctgcaccagctctgaagtgt
gggagtctcttttcagacggggaagagtcagacagcgaaggaatgttaccagattccacc
tgccttgttgctacagccaccatcagcattttcaatgaacctgatgtggaagaaggaggg
actgagaagaatttaacagttgcgcagcaaaaggctcggcgcattatggagtcctttgaa
aacccgttcaggatgtatctgcctgcagaacagaaccctgcccacgtctctcagtcagca
aagtttgacccatcatccaaaatttacgaaatcagcaatcggtggaagttgatgaatcag
acacaactgcagaaagaggcaaaggaagaagccaaaaagaaagtagcacagcagacagcg
gctcgggagcaggcccagaaggcatgcaaaatggctgcagaaaatgttgtttcagttcgt
caacaagcagcgcaggagcaagctggcaagaaaagggagagaattgcaagtgagcctgaa
acagagctgccaaagcaagaaaagaaacggccaaaagcctcccagcaaccagaggagcag
gagacgccaaaggagttcaccccctttgattacagcaagtctgacttcaaagcgtttgca
ggaagcagcaagtccaagcagtcctcgcagtttgatccagccaagcaggcccacacaggc
aagaaatttggtggagccaacaaacttcaacaacaagctggaaataaaagcatgtcctac
ctcgctgggaaaacgaatcggggctccaggcacaactggccaaaaagatag
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