Crocodylus porosus (Australian saltwater crocodile): 109314589
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Entry
109314589 CDS
T07440
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109314589 (TNRC6A)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109314589 (TNRC6A)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109314589 (TNRC6A)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109314589 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109314589
NCBI-ProteinID:
XP_019397358
Ensembl:
ENSCPRG00005011151
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MRQLEAKATKDVGRKLRRDLVQEEEEQLMEERKKRKDDKKKKEAAQKKAIEQKIKVPEQT
KTSVSQPQPVTSNGTSTTTSTNNNAKRATANNQQQQQQTLPRYPPREVPPRFRHQEQKQL
LKRGQQLPVIAANLGSTPKVLNSQSGGSTVANKQPVTNGEVPNSSKKQPGMPPIRDLVSH
SPNQSDLNHSGLGSHYDNSHWGPVSTNSDSSTNWDKVIVDGSDKEAWPSITGSDPELASE
CMDTDSASSSGSERNLVIMASGSTGGENDGIRNGIGHGSQNKFVVGSNSNNVGNGSINGP
WGLSHGSIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNGGLNPSTLNSNGNHGAWPV
LENNGHALKGSVGNGNSGTNIQCSTIGQISNNQSINSKVGGSAHVSWGSLQENGDSEING
TRKVSFSGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSVQINELPNNTGHGAWRMSTMNHS
QIQASPVTNGTSISHLSNGEAKNGGSYGTTWGAYGSNYSGDKCSGPNSQANGDTVNATLM
QPGSSGPGSTNYQMNGNKGGGVWEAGTVSSQNLPWGSGNGASAGGSRRGWGNPAQNTGTN
ISNGEWNKLPSNQHSNESVSGNSRKFTNGWKSTEEDDIKVNSQSSAAPQIAEQSNVWAKT
VTGDSEGSAESTACHEERITADGQNRERRKVDQHALLQSIVNRTDLDPRVLSNSGWGQTP
IKQNTAWDTEMSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSTNSNDTSSVSGWGDPK
SATRWGDSKGSNSQGGWEEDSAATVTVKSNQSWGGSKEDKSSWNDAQKIKQGWGDGQKAS
QGWGISASDSWGENSRSNHWGETKKSSSGGSDSDRSVSGWNEPGKSNSVTWGGSNANPNN
ASGWDEPAKSNQSQGWGEPPKSNQPPGWGDSSKPINSPDWNKQQDVGSWGAPSAPSKPPG
SGWLGGPMPTPAKEDEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVP
NGSSSSDQQAQVHQQLLPSSAMSSKESSSGSGWGEPPTPATTVDNGTSAWGKPMDTGTSW
GEPISDAAGTSGWGNASLGQQASSKPGPKSMQDSWCGDDMSLTGSRQTSWEEEEDVEIGM
WNSNSSQEVNSSLNWPPYMKKMPTKGTMKGGNKQDETWIHPFIKQFTSLSFSRESPEETI
QSNKADMSGGVLLDKRMEMDKPGLNVGDYNRVIGKGPGSRPQISKESSMDRSPYFDKNGN
PSMFGVGNIAAQPRSMQQPPAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNNGGLSP
LFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQKVQNQRSMPSGGRQQQEQQGRSLSMQQ
QMMQQSRQLDPNLLMKQQTPPSQQQTLHQSSMKSFFENVIPHATPELQKGPSPINAFSSF
PIGMNSNLNVNMDMSSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPF
VPYDFMNSSNSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPY
VTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSSTAQS
TSVARNSDSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKPPLSTWDNS
LRLGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFH
LNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTPSPG
WQSLGSSQNRLGSIDSSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSSNYSTSLWGT
PSSNDTRGISSPSPINAFLPVDHLGGGGESM
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttggaagccaaagctaccaaagacgtggggagaaaactacgcagggattta
gtgcaagaagaggaagaacagttgatggaagaaaggaaaaagagaaaagacgacaagaag
aagaaggaagctgctcaaaaaaaggccattgaacaaaaaatcaaagtgccagaacaaaca
aagaccagtgtaagccagcctcagcctgtcacctccaacggcacttccacaacaaccagc
actaataataatgccaagcgggccacagccaacaatcagcagcagcagcagcagaccttg
cctcgataccctcctcgtgaagtaccaccacgatttcgacaccaggaacagaaacagctt
ctgaagcgaggtcagcagttaccggtcatagctgcaaacctgggatctactcctaaagta
ttaaacagccagtcaggaggtagcactgttgcaaataaacagccagtgaccaacggcgaa
gtgccgaacagcagcaaaaaacagccaggcatgcctcccattcgggacttggtcagccac
tcccctaaccagtcagatctgaaccacagtggtctaggatctcattatgacaattctcac
tggggacccgtctctacaaatagtgactccagcacaaactgggacaaagttattgtagac
ggctctgacaaagaagcatggccatcaatcactggcagtgacccagagttggcatcagaa
tgtatggacactgactccgcctctagctctgggtcggagagaaacctcgttattatggct
tcagggagcacaggtggtgaaaatgatggcattcggaacggcattggacatggttctcaa
aataagtttgtggttggtagcaacagcaataatgtgggcaatggtagtattaatgggccg
tggggtttgtcccatggatccataataagcacatgtcaagtttctgtggatgctcctgac
agcaaatcggaaagtagcaacaatagaatgaatgcttggggcaccataaactcttcatca
aatggagggttaaatccaagcactttgaattcaaatggcaaccatggtgcctggccagta
ttggagaacaatggacacgcccttaaagggtctgtagggaatggtaattctggcacaaat
attcagtgcagtaccataggtcagatatctaataatcagagtattaactctaaagtgggt
ggttcagcccatgtttcctggggaagccttcaggaaaatggtgattctgaaataaatggt
acaaggaaggtttcattcagtgggcaacctcaaaaccttaacactgaaatgaatggacca
aataacactactaactttatgacctctagtttaccaaactctgctggttcagtgcagatt
aatgaactgcctaataatacagggcatggggcctggcgcatgagcacaatgaatcattct
cagattcaggcctctccagttacaaatggcacttccatttctcatcttagcaatggtgag
gcaaaaaatgggggttcttatggtactacatggggtgcctatggttccaattactctgga
gacaaatgttcaggcccaaacagccaagctaatggtgacactgtgaatgcaactctaatg
cagccgggcagcagtgggcctggcagcaccaattatcaaatgaatgggaataaaggagga
ggggtatgggaggcagggacagtcagctcccaaaatctgccatggggaagtggaaatggt
gcgagtgccggaggaagtcgaagaggatggggcaaccctgcacaaaacactggcactaac
atttcaaacggggaatggaataaactgcctagcaatcagcattccaatgagagtgtaagt
ggaaatagtaggaagtttacaaatggatggaaatctactgaggaggatgacattaaagtt
aatagccagagttctgctgcgccgcagatagcggagcagagcaatgtatgggccaaaaca
gttactggggatagtgaaggtagtgcagagagcactgcgtgtcacgaagagagaataact
gcggatgggcagaatcgagagagaagaaaagttgaccagcatgcgttactccaaagtatc
gtgaacagaactgacttggatccacgtgtcctttccaactcgggttggggacagactcca
atcaaacaaaacactgcctgggataccgaaatgtcgccaagaggtgaaagaaagactgac
aatgggacagaggcctggggaggctctgtgacacagacttccagctcaggggggtgtgtg
gatagacctagtactaatagtaatgatacctcatctgtatcagggtggggagatccaaag
tctgctacaaggtggggagactccaaagggtctaacagccaaggggggtgggaagaggat
tctgctgctacagtaacggtcaagagcaatcaatcatggggaggtagcaaagaggacaag
tcatcttggaacgatgcacagaagatcaaacagggatggggagatgggcagaaagccagc
caaggctgggggatttctgccagtgacagttggggggaaaattcacgaagcaaccattgg
ggtgagactaagaaatcaagttcaggaggtagcgacagtgacagatccgtgtctggttgg
aatgagcctgggaaatcaaattctgttacttggggaggtagcaatgcaaacccaaataat
gcttcaggatgggatgaacctgcaaagtctaatcagagccagggctggggagaacccccc
aaatccaatcagcctccaggttggggggattcatcaaagccaatcaattctccagactgg
aacaagcaacaagatgttggatcttggggagcaccgtctgcccccagtaaaccgccaggg
tcaggctggttgggtggaccgatgccaacgccagccaaggaagacgaacccacaggatgg
gaggagccatccccagaatcaatacgccgtaaaatggaaattgatgatgggacttctgct
tggggtgatccaagcaaatacaactacaaaaatgtgaatatgtggaataaaaatgtccca
aatggtagcagcagttcagaccagcaagcacaggtacatcagcagctactgccttcaagt
gccatgtccagcaaggaaagcagcagtggttctggatggggagagcctcctactccagcc
actactgtagataatggaacatcagcgtggggtaaacccatggatactggtactagctgg
ggagaacctatcagcgatgcagcgggcacctctggctggggaaatgcttctcttggtcaa
caggcttctagtaaacctgggcctaaatctatgcaagatagctggtgtggagatgacatg
tcattgacaggcagtcggcagaccagctgggaggaagaggaggatgtagagattggaatg
tggaacagcaattcatcacaagaagttaactcatctttaaattggccaccatacatgaaa
aaaatgcctacaaagggaacaatgaaaggtggaaataagcaagacgaaacatggatacat
ccgttcattaagcaattcacgagcctcagtttttcaagagaatcgccagaagaaaccata
cagagcaataaggcggatatgtctggaggagtattgctggataaacgaatggaaatggat
aagcctggcctgaatgtcggagattacaatcgagtgatagggaaaggccctggttctcgt
cctcagatttccaaagagtcttccatggatcgcagtccttattttgataagaatggcaat
cccagtatgtttggtgttggtaacatagcagcacagcccaggagcatgcagcagcctcca
gcacaacctcttaattcatctcagcctaacccacgtgctcaagtgcctcctccattacta
tcccctcaggttccagtatcattactgaagtatgcaccaaacaacggtggcctgagtcca
ctttttggcccgcaacaggtagccatgctgaaccaactatcccagttaaaccagctctct
cagatctcccagttacaacggttgttggctcagcagcaaaaagtgcagaatcagagaagc
atgccttctggtgggcgtcaacagcaggagcagcagggtcgatcacttagtatgcagcaa
cagatgatgcaacagtctcgtcagcttgatccaaacctgttgatgaagcagcagactcca
ccatctcagcaacagacactccatcagtcaagcatgaaatctttctttgagaatgtcata
ccccatgctactcctgagctgcagaaagggccatcgccaataaatgcattcagcagcttc
ccgataggcatgaattcaaacttgaatgtaaacatggatatgagcagtattaaagagcca
caatcacgactgaggaaatggactacagtggacagcatttctgtgaacacatcactagat
cagaactccagcaaacatggtgctatttcaagtggtttcaggctggaggagtctcccttt
gttccatatgactttatgaacagcagtaattcaccagccagtcctccaggatctattggg
gacggctggccacgtgccaaatcgcctaatggctctagcagtgttaactggccaccagag
tttcgtcctggcgagccatggaaaggttatccaaacattgaccctgaaactgacccttac
gtcactcctggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccac
ctcagggacaggaacagtgggtcatcctcatctttgaacaccacgctgccttcaactagt
gcctggtcatccattcgtgcctccaactacaatgtttccctcagcagtacagcacaaagc
acttcagtagccagaaacagtgattccaaatcaacatggtctcctggatcagtcactaac
acctctctggctcatgagctgtggaaggtccctttgccacctaaaagcatcactgctcca
tcccgcccaccaccggggctgacaggccagaaaccacctttgtccacatgggataactcc
ctacgtttgggtggaggatggggaaattctgatgccagatatacccctggttcaagctgg
ggtgagagcagctcagggagaataacaaattggcttgttctaaaaaaccttacacctcag
atcgacggctcaaccctgcgtaccctgtgcatgcagcacggtccactaataacattccac
cttaacctcccacatggtaatgctttggtccgttacagttcaaaagaagaggtagtgaag
gcacaaaaatctctgcacatgtgtgtattagggaacactactattcttgctgagtttgcc
agtgaagaggagattagtcgcttctttgcacaaggccagtctctgactccttctcctggc
tggcaatctcttggatccagccagaaccgacttggatccattgacagttcccattcgttc
tcaaaccgtaatgatctaaatcactggaatggtgctgggctgtcgggaactagcagtgga
gaccttcatggcacttcactctgggggagctccaactattccacaagcctgtggggcacc
ccgagcagcaatgacacccggggaattagcagcccatcccccatcaatgctttccttcct
gttgaccacctcggtggaggtggagagtccatgtaa
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integrated database retrieval system
