Crocodylus porosus (Australian saltwater crocodile): 109314670
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Entry
109314670 CDS
T07440
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109314670 (RAI1)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109314670 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
109314670
NCBI-ProteinID:
XP_019397495
Ensembl:
ENSCPRG00005015992
UniProt:
A0A7M4FCQ9
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQQTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYNQQQLPYPG
YESSAVEKYHRGNKQLPGQQLQGRPSFSNYAVQENSPYPARYSGEESLQAWGAQPQALAG
GVAKYEENLMKKTPAPPGSRQYHEQASQLPFRTHSLHLQQQPALTYPKLPRQKIQNDVSS
PMPFSQSPHFTQSFPASSTYSSVPGGSQTAHSYKSCTAPSGQPQHERPLGNAANLASGQR
VQNLHGYQANRMSYDQQPQQQPQPQPQPQPQPQSSLPGRHHAQETLHYQSLAKYQHYSQP
GQTYCQGDAPPVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFQYSQQS
LSAGTFPAGITDHSHFMPLLNPSPTDGTSPEAQPGNCKSLQKEKIPENLLSDLSLQSLTA
LTSQVENISNTVQQLLLSKSSMAQKKGIKNPPRTPEQLKGQHCSPESSTYSAEQVGTPLS
DPLSTPQSVHAETQDADYLSGSEDQLERSFLYCGQGRSPARVNSNSKAKPESVSTCSVTS
PDDMSTKSDDSFQSIHANLPLETFTKFVANERECPRLLLSALSQEELASEIIVLQDAINE
KVDKAWADSPSLSKEATKSPFHLENHRTCLDSMVKGPWPSQGDSSTLTESLKLDKASGGN
NGKDFSEEVYETPSVEFAAAETKNTLKDAGSLAYNSKPSIPAATSSSGAASYSCYSNTTA
NSVGSESTMEHFDWPDESLGESCLRWKDLGSSLQSSDLSKGLFHSKLAGSCKEKKNACSM
EMCDGEQPAKNEQAKDFSQQEMGEEEEETLTYDEATKADNERWLEDTRHCCSGGDFSEIP
MISSPDLKESDLEPEEYSSLCELASSEQKSMIYDTSPPKPPENAPVLSSSDVPVSAEETV
STVEKDSSAPSSRLSGQSVILLGPAVGTETKVKSWFESSLSHIKPEDEAVGSEDTLQGKA
EPEMPLSVKVKKQVAPENLLIKSEPTLRAKSLRSKRVHCRLSEREDSGKLVPSLIKDVPG
AGMVGSTCVGPESQLETPSKNAHGQTPRFPAEGLPARMCTRSFTALTEPRTPAPLEGLKA
SDHQEKLGKKSACAMKQRAAFKARKRSGKPAPKGVQNPSDLAPVLVPNLVQNDDLVGQKP
KDLEAPETEVKDQRSMILRSRTKTQEVFYTKRRRERRTVEVRLKNCKAPKKLLSNNHLPP
AFKLASQGSPHKEGKVGKRMKLPKPGAGMGSKMSERPLHSLKRKSTFLSPIPAKKRNLVL
RSNSSGAKDEKPDTSPSLFKRMPSAKKAKAKLPTKSPCEAVLKPPLAKETPDVCIKITSR
AAFQGATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFACKTAAAATARRSPLSPSAAEKE
RALKHGSVTPAAGEARPLSQGMAQKSPAASVAEQLCRNSNNRSLKGKLMNGKKLSSDCFR
GEACLSPEPAQHGGSMAAKSLGLLPKKRSRKGKAAALGLAKSPLDKRAALAPPLLLTARE
RAAAGNTLGNGEEGQRDGKKPKSEDKDFAGSEGPEGRAAPGQARAPKPRANHSNYNGYSK
RQRKRLARGKAKSVASRCKSRGKRRRQQQQAPLLHPTEPEIRLKYISCKRLRTDSRALPF
SPYVRVEKHDEFTTTCTVVNSPGDEARLQKEQHRSSAAQALPPSGAAPQPRAALPSSSTM
HLGPVVSKTLSAACLVCCVCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKDKIKAEGPSD
EAPLPLPAERVLKATDNCPASAAVGKVPRLDSAADSAKQSALRSSSRGMFRKLQSCYCCD
ERTEGEEAAEKPKRHECSKPESPAQEPAGDTQEHWVHEACAIWTAGVFLVAGKLYGLQEA
IKAAAEVKCSSCQQTGATVGCCHKGCAQTYHYACAIDTGCLLTEESFSLKCPKHKRHPL
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagaactaccagcagact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcgtcagaggctggtggcgaaagagtactacaatcagcagcagctgccgtacccgggg
tatgagagcagcgccgtggagaagtatcaccggggaaataagcaattacctggccagcag
ctgcaaggcaggccgtccttttcgaattacgccgtccaagagaacagcccgtacccggcc
cgctactccggggaggagagcctgcaggcctggggggcccagccgcaggccctagccgga
ggggtggcgaagtatgaggagaacttgatgaaaaagacgccggctcccccgggcagccgg
cagtaccacgagcaggcgtcacagctgccgttcaggactcactccctgcacctccagcag
cagcccgccctgacctaccccaagctgccgaggcagaagatccaaaatgacgtctcctcg
cccatgcccttctcccaaagcccccacttcacccagtccttcccggcctcctccacgtac
tcgtccgtgccgggcgggagccagacggctcactcctacaagagctgcaccgcgccctcc
ggccagccgcagcacgagaggccgctgggcaacgccgccaacctggcctccgggcagcgg
gtgcagaacctgcacggctatcaggccaatcggatgagctacgaccagcagccgcagcag
cagccgcagccgcagccgcagccgcagccgcagccccagtcttccctgccaggaagacac
catgcccaggaaaccctccattaccagagcctggccaagtaccaacattacagccagccc
ggccagacctactgtcagggcgacgcaccgcctgtgaggacgccggagcaatactaccag
accttcagccccagctcgagccattccccagcgcgctctgtcgggcggtctccgtcctac
agctccacgccgtcccccctgatgcccaacctggagaacttccagtacagccagcagtcc
ctcagcgccgggacgttccccgccggcatcacagaccacagccacttcatgcctttgctc
aacccttctccgacagatgggacgagtccagaggcgcagcccgggaactgcaaaagcttg
caaaaggagaagatccccgagaacctgctgtccgacctcagcttgcagagcctgaccgcg
ctcacctcgcaggtggaaaacatttccaacaccgtccagcagcttctcctgtccaagtcg
tccatggcccagaagaaaggcatcaagaaccctcctcggacgccggagcagctcaaaggg
cagcactgcagccctgagagcagcacgtactctgctgagcaggtggggacgcccctgtca
gaccctctcagcaccccacagtctgtccacgctgaaacccaggatgccgattacctgagc
gggtctgaagaccaactggagagaagtttcctctactgcggacagggccgcagcccggcc
agagtcaacagcaactccaaggccaagcccgaatccgtgtccacctgctctgtgacgtcc
ccggatgacatgtccacaaagtccgacgattccttccagagcatccatgccaacctgccc
ctggagaccttcaccaagtttgtggccaacgaaagggagtgcccgcggctgctcctgagc
gcactctcgcaggaggagctggcgtctgagatcatcgtcttgcaagacgcgatcaatgag
aaggtggacaaggcttgggctgactcccccagcttgagcaaggaagcgaccaaatccccc
tttcatttagaaaaccacaggacatgcctggactcaatggtaaagggcccgtggcccagc
caaggggactcgagcaccctcactgaatccctgaagttagacaaagcctccggtgggaac
aacggcaaggacttcagtgaggaggtttacgagactccctcggtggagttcgcagccgca
gaaacaaagaacaccctcaaagatgcggggtccttggcatacaactccaagcccagcatc
ccagctgctacttccagctccggggctgccagctacagctgctactccaacaccaccgcc
aactcggtgggctctgaaagcaccatggagcattttgactggccagatgaaagcctcggc
gaatcctgcctgaggtggaaagacctggggtcaagcctgcaatcgtcagacctttccaag
ggcttattccacagcaaattggctgggtcttgcaaggagaaaaaaaatgcctgcagcatg
gagatgtgcgatggcgaacagccagccaagaatgagcaagcaaaggatttcagccagcag
gagatgggggaggaagaggaagagacgttgacgtatgacgaggccaccaaagcagataat
gagagatggctggaggacaccaggcactgctgttcaggtggggacttcagcgagattccc
atgatatcgtctccggatctgaaggagtccgacttggagcccgaagaatactcctcgctg
tgcgagctggcgagttcggagcagaagtccatgatctacgacacgtccccaccgaaaccc
cccgagaacgcgcctgtgctctcttccagcgacgtgcccgtgtcagccgaggagacggtg
agcacggtggagaaagacagctccgctccttcctctcggttgtccggccagtccgtgatc
ctcctcggcccagccgtcgggaccgaaaccaaggtgaagagctggttcgaatcttccctc
tctcacatcaaacccgaggatgaagctgtggggagcgaggacactctccagggaaaggca
gaacctgaaatgcccttgtcagtcaaggtcaagaagcaagtggcccctgaaaatctgctg
ataaaatcagagccaaccttgagggccaaaagcttacggagcaagagggtccactgcagg
ctgtcggagagagaggactctggtaagctggtgccgagcctaatcaaagacgtcccggga
gctggcatggtgggcagcacgtgtgttgggccagagagccagctcgagacaccaagcaaa
aatgcccatggccagactcctcggtttccagcggagggcttgccagcgaggatgtgcacc
cgctctttcactgctttgacggagcccaggacgccagcccctctggaagggctgaaagcc
tctgaccatcaggaaaagttggggaagaaatcggcttgtgccatgaagcagagagctgcc
ttcaaggccaggaagcgctctgggaagccagcccccaaaggtgtccagaatcccagcgat
ctggctccagtcctggtcccaaacctcgtgcagaacgatgacttggttggccagaagcct
aaagacctagaggctccagagaccgaggtgaaggatcagaggtccatgatcctccggtcc
cggacaaagacgcaggaggtcttctacaccaagcggaggcgggagcggaggaccgtggag
gtccggctcaaaaactgcaaggcgcccaagaagctcctttccaacaaccacctcccgcct
gccttcaagttggcatcccagggcagcccgcacaaggagggcaaggtaggcaagaggatg
aagctccccaagccgggggctggcatgggcagcaagatgtcagagcggccgctgcattcc
ctgaagagaaaatccaccttcctctcccccatcccggccaagaagaggaacttggtttta
cggagcaacagcagtggcgccaaggacgagaagcctgacacctcccccagcttgttcaaa
cggatgccgtccgccaagaaggcaaaggccaaactgcccaccaagagcccctgcgaagcc
gtcctcaagccccctctggccaaagagacccccgacgtctgcattaaaatcacctcccgg
gccgcctttcagggggccacgaagacgaaagtcctgcctccgcggaagggcaggggcctc
aagctggaggccatcgtgcagaagatcacgtctcccaacctgaagaagtttgcctgcaaa
actgccgccgccgccaccgctcgccgcagccctctgagcccctccgccgcagagaaggag
cgggccttgaagcacgggagcgtaaccccagcggcgggagaagccaggccattgagccag
ggcatggcacaaaagtctcctgccgcttcagtagcagagcaattatgcagaaattcgaac
aacagatccttaaaagggaaactaatgaacggcaagaaactgtcctccgactgcttcagg
ggtgaggcctgcttgtctcccgagccggcacagcacggcggcagcatggccgccaagagc
ctcggcttgctgcccaagaaaaggagccggaaggggaaagccgcggccctcggcctggcc
aagagccccctggacaagcgggctgccctcgcccctcctttgctcctgacagcccgggag
cgggcggccgcggggaacacgctgggcaatggggaagagggacaaagggatgggaagaag
ccaaagagcgaggacaaagactttgcaggcagcgagggccccgaggggagagctgccccg
ggccaggcccgggcgccgaagccgcgagccaaccactccaactacaatggctactccaag
cggcagaggaagcggctcgcccggggcaaggccaagagcgtggcgtcgcggtgtaagagc
aggggcaagcggcggcggcagcagcagcaggcccctctgctccaccccacggagccggag
atccgcctgaagtacatctcgtgcaagcggctgcggacggacagccgggcgctgcccttc
tccccgtacgtgcgcgtggagaagcacgacgagttcaccactacctgcaccgtcgtcaac
tcccccggggacgaggccaggcttcagaaggagcagcaccgctcgtccgcggcccaggcc
ctgcctcccagcggggccgcgccgcagccccgagcggcgctgccctcgtcttccaccatg
cacctgggccccgtggtgtccaagacgctcagcgccgcctgcctggtgtgctgcgtctgc
cgaaacccagccaactacaaagacctgggggacctgtgcgggccgtactaccccgaggac
tgcctgccgaagaagaagtcgaggctgaaagacaagatcaaagcggaggggccgagcgac
gaggcgcccctgcctctgcccgccgagcgcgtgctcaaagcaacggataattgtccagcg
agcgctgccgtcggcaaggtgccgaggttggacagcgccgctgactcggccaagcagagc
gccctccggtcgagctctagggggatgttcaggaaactacaaagctgttactgctgtgat
gagaggacagagggcgaggaggcggcggagaagcccaagaggcacgagtgcagcaagccc
gagtccccggctcaggagccggcgggcgacacgcaggaacactgggtccacgaggcctgt
gcgatatggaccgctggggttttcctggttgcgggcaagctgtatgggctgcaggaggcg
ataaaggcggctgctgaagtgaaatgctcgagttgccagcaaacaggagcaaccgttggc
tgctgccacaagggatgtgcccagacctatcactacgcatgtgccatcgacacaggttgc
ttattaactgaagagagtttctctctgaaatgtcccaaacacaagaggcatcccttataa
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integrated database retrieval system
