Crocodylus porosus (Australian saltwater crocodile): 109314730
Help
Entry
109314730 CDS
T07440
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109314730 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109314730 (DROSHA)
03009 Ribosome biogenesis [BR:
cpoo03009
]
109314730 (DROSHA)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109314730 (DROSHA)
Enzymes [BR:
cpoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
109314730 (DROSHA)
Messenger RNA biogenesis [BR:
cpoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109314730 (DROSHA)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
90S particles
RNase
109314730 (DROSHA)
Prokaryotic type
rRNA processing factors
109314730 (DROSHA)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
109314730 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
YcaO
Cro
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
109314730
NCBI-ProteinID:
XP_019397593
Ensembl:
ENSCPRG00005016610
UniProt:
A0A7M4FJX7
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGVRNSTQTFRPQNLRQLHPQQPSVQYQYDQQATPPATYSNPPTT
GYMPPRLDFVPYPPPVPPSAQSPISQCPMRPPFPNHQVRQNFPVPPCFPPAPPPVPNPSN
APVPGAPTGQNAFPYLMPPPAVPHPPPPPVMPQQVNYQPVYSTGYSQQSFPPPNFNSYQH
NSNTFQSSSSNNSSSSGSSHFRHTSQYQGDKSQSERRSPERSKHYDEHRHREHGHVHGDR
HRSNNHGDRRDRGRSPDRRRQESSRHRPDYDRGRTPPRHRSYERSRERERERHRHRDSRR
SPSPERSYKKDYKRTGSRSPSRERKRPRWEEDRERWSEGQSASKEKSYTSIKDKEPEENI
SEKNEEEEDELLKPVWVRCTHSENYYSSDPMDQVGDSTVVGTSKLRDLYERFEEELGKRQ
AKAKAARPPWEPPKTKLDEDLESSSDSDCDSEDDSSCSSSSDSEVFDVIAEIKRKKAHPD
RLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRI
TVSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMM
PENFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSSCCPRFHFMPRFVRFLPDGGKEV
LSMHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQ
LDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQ
KLSQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCL
MHLDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMH
MRKKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGL
ATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGS
LEEAKQLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGV
IFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTL
LRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEY
VHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHAR
TYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMR
WEREHQEREPDETEEARK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctggacgaggatgtccccggggccaaggaggacctggagttagaaat
tcaacacaaaccttcagacctcagaacctgcggcaacttcaccctcagcagccttcagtg
caatatcaatatgaccaacaagccacccctccagctacctattctaaccctccaaccaca
gggtacatgcctcctcggttggattttgtaccttatcctcccccagtgcctccatcagca
cagagtccaatcagccagtgtcccatgaggccaccttttccaaaccatcaagtgaggcaa
aattttccagtccctccttgttttcctcctgctcctccgccagtgccaaatcctagcaat
gccccagtgcctggagcccccactggacaaaatgcatttccttacctgatgccacctcct
gcggtgccacatcctccaccaccaccggtcatgccacaacaagttaattatcaaccggtc
tactctacaggctactcacagcagtccttcccacctcctaactttaatagttatcaacat
aactctaacactttccagagcagtagcagcaacaatagcagcagtagtggtagcagccat
ttccggcacacaagtcagtaccagggagataaatcccagagtgaacgaaggtccccggaa
aggagtaagcactatgatgaacaccggcaccgggaacatgggcatgttcatggagacaga
catcggtccaacaaccatggggatcggcgggatcgaggcaggagtcctgatcggcgaaga
caagaaagcagtcggcataggcctgattatgacaggggaaggacgccgcctcgccacaga
agttatgaacgtagcagggaacgggaaagggaaaggcataggcatcgggatagccgaaga
tcaccatctccagagaggtcctacaagaaagattataaaagaacagggagccgatccccc
agccgagagagaaagagacctcgttgggaggaggacagagagaggtggtcagaaggccag
agtgctagtaaagagaagagttacaccagtatcaaagacaaagaaccagaggaaaatatt
tcagaaaaaaatgaggaggaagaggatgaattgctcaagcctgtctgggttcgttgtacc
cattcagaaaactactattcaagtgacccgatggatcaagtgggggactccactgtggtt
ggaacaagcaaactccgagatttgtatgaaagatttgaggaggagttaggaaagcgacag
gcaaaagccaaagcagccaggccaccatgggagccaccgaagaccaaactagatgaagat
ttggagagctccagtgactcagactgtgactctgaagatgacagcagctgttccagcagc
tcagattctgaagtttttgatgtcatcgcagaaattaagcgcaaaaaagctcacccagat
cgtcttcatgaggagctgtggtacaatgatcctggacagatgaatgatggaccactatgt
aagtgtagtgcaaaagcccgacgaacaggaataagacacggcatttatcctggtgaagag
cctattaaaccatgccgtcctatgaccaacaatgctggaagactgtatcactaccggatt
actgtgtcacctcccacaaatttcttaactgatcgaccaactgttatagaatatgatgac
catgaatatatttttgaaggattttctatgtttgcacatgccccactaacaaatattcct
ctatgtaaagtaatcagatttaacattgactatacaattcatttcattgaagagatgatg
cctgagaatttttgtgtgagaggacttgaattattttcctcgtacctgttcaaagatatt
ttggaactctatgactggaatcttaaaggtccttcacttgaaaatgattcctcttgctgt
ccaagatttcacttcatgccacgttttgtgagatttctgccagatggaggcaaagaagtg
ctgtcaatgcatcagattctactttatttgttacgctgcaacaaagctttggtccctgaa
gaggagattgccaatatgcttcagtgggaagaacttgaatggcagaagtatgcagaggaa
tgcaaagggatgatagttaccagccctggcatgaaacccagctctgttcgcattgatcag
ttggaccgtgagcagttcaatccagatgtgattacttttcctattattgtccactttggg
atacgacctgctcaactcagttatgctggagaccctcagtaccaaaaactatggaagagt
tatgtaaagctgcgtcatttgcttgctaatagccccaaagtcaaacaggctgataaacag
aaattgtcacagagagaggaagcactgcaaaaaattagacagaaaaacacaatgagacga
gaagtgactgtggagctgagcagccagggattctggaaaaccggcattcgttctgatgtc
tgccagcatgcaatgatgcttcctgtgcttacccaccatattcgctatcatcaatgtctg
atgcatttagacaaattgataggatacacatttcgagatcgttgcttgctacagcttgcc
atgactcatccaagccatcacttaaactttggaatgaatccagaccacgcaagaaattca
ttatccaactgtggaattcgacagcccaagtatggagaccgaaaagtccatcacatgcac
atgaggaaaaaaggaataaataccttgataaatattatgtcacgtcttgggcaagatgac
ccagccccttccaggattaaccacaacgagcgtctagaatttctgggagatgctgtagta
gaattcttaactagtgttcatctgtactatctgtttccaactctggaagaaggaggacta
gctacctatcgcactgccatcgttcaaaatcagcatcttgctatgttggctaagaagctg
gaactggaccggtttatgctttatgctcatggacctgacctttgcagggaatcagacctc
cgccatgcaatggcaaactgttttgaagccttgataggtgctgtttacctagaaggaagc
ctagaagaagccaaacaattatttgggcgtttactgtttaatgacaaggacctgcgggat
gtatggcttaattatcctctacacccactccaactgcaagaatccaacactgacagacag
ctcattgagacttctccagttctccagaaactaacagagtttgaggaagcaattggagtt
atttttactcatgtgaggcttctagcacgtgccttcaccttgagaactgtggggtttaac
catctgactctaggccacaatcagaggatggaattcctaggtgactccataatgcaattg
gtagccacagagtacttattcatacatttccctgatcatcatgaagggcacttaacgctg
ttgcgaagctccttggtgaacaacaggacacaggctaaagtagcagaagagctgggtatg
caagaatttgccatcactaatgacaagaccaagaggcctgtggctcttcggactaagact
ttggccgatctgttggaatcctttattgctgcactttacattgataaggatttggaatat
gttcatactttcatgaacgtgtgcttttttccacggttaaaggagttcattttaaatcag
gattggaatgacccaaaatcccagcttcagcaatgttgcctcactctcagaacagaagga
aaagagccagacattcctttatacaagactctgcagacagtgggaccttctcatgccagg
acatacacggtggctgtttatttcaaaggagaacgaataggatgtggtaaaggcccaagt
attcaacaagcagaaatgggagctgcaatggacgcacttgaaaaatataactttccccag
atggcccatcagaaacggttcattgaacggaaatacagacaagagttgaaagaaatgagg
tgggaaagagagcatcaagagagagagccagatgagactgaagaagccaggaaataa
DBGET
integrated database retrieval system
