Crocodylus porosus (Australian saltwater crocodile): 109314804
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Entry
109314804 CDS
T07440
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109314804 (CACNA1H)
04020 Calcium signaling pathway
109314804 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109314804 (CACNA1H)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109314804 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109314804
NCBI-ProteinID:
XP_019397684
Ensembl:
ENSCPRG00005015088
LinkDB
All DBs
Position
Unknown
AA seq
2479 aa
AA seq
DB search
MTDGGRSAPFPPPAGGEVRVPIACRPARDEDALSAGKPVRGSPGSRSRDAGSEEEEQVPY
PALAPTVFFCLQQATRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVKCKSER
CTILEAFDHFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMLEYSLDGHN
VSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLW
AGLLRNRCFFDSNFAMTYNLTFLHPYYQPDDGEDNPFICSSHRDNGMQKCSNIPNLKHLK
VECTLSMDPYTPNLYNPDFSNRNACINWNQYYNVCMAGDVNPHNGAINFDNIGYAWIAIF
QVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQL
MQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLYNNWQSKRRKKVNP
NSTTNGQSRRGRKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICGLELKVMKPG
GQLMLPPPSPNLQSPPAPDSESVHSIYHADCHVEAPQVKCKSSNTPASIKLAAGLTSHGN
MNYPTILPSPASKANSVPGPKGKKNGSSPVPMVSSPVRLNADSFGKLQHLMGEHGLRRAS
SRLSGLNVPCPLPSPQASMLTCELQNCPYCASILEDPEFEFSESDSYDSDNNGVYEFTQD
LRHGDQRDQIQQQRNKRRKKKKKPKERNKAARLWSAFGNKLKKIVESKYFNRGIMIAILI
NTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGIFGYIKNPYNIFDGIIV
IISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLF
IFIFSILGMHLFGCKFSLKTKTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMA
STSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDEDFEKL
KDLRAAEMKMYSLAVTPNGHLEARGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDSRR
GSNASIDPLSYDQKSLSSLRSSPCANWGPSSNWGSRRSSWNSLGRAPSLKKKNQSGERES
LLSGEGKGSTDDESDDAKSSTVSRASLHRRAESLDYRSSLDLPELLQLPSMRHSLSINPM
AMLPTEYQDCNGKMMHVPNEFFLRIDSHKDDPLDYDDDMEDSYCYRIRKMLEPYKPEWCK
NHEDWSLYLFSPQNRFRAMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHSTERIF
LSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAG
GAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGIL
GVQLFKGKFYSCEGSDTKNITTKADCTNAHFKWVRRKYNFDNLGQALMSLFVLSSKDGWV
NIMYDGLDAVGIDQQVATKDILRFFPGIQCESAWSTESEEVICGPEETLAVGSYVPRAGD
REPCSLLCLGFSLSTEAQRRPYYADYSPARRYIHTLCTSHYLDLFITFIIGVNVITMSME
HYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIT
LEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFM
LLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDT
LRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMD
AEIELEMSRGAATPASSGGGGGTAASDGRAPYGSQEGGKLETPLRVKQQALEALSCENVS
LAMPGSDPLEGGETPVMPHTSFCSVPHHHVPTPSHKAPGHESEEGAACLWAKKESQNFLT
VRKISVSRMHSLPNDSYMFRPVMPAKPPYPLHEVEMESHPCKSQRGSITSTRSQPVGTSS
SLRIPTECLQLTPGPSYRNARDLWKIHPPTAAPRSPSLNRLLCRQEAIRTESVDGQKAEA
KDNVQVESGESLQPKKPSQSTLSPPPLHPAPRSLPGTPPHSPASPSPHRHSSVCTRKHTC
SQHSIPSWASSESSDPLRPENSLFESSDLADEEVSHINSSAKDWREAPGSRSLSVSPFAS
LASSPAHHKNCSTTSLAGSGGSREKDLKKFYSVDTKGFLDKPSWADNQRRHSIEICPSLD
DGDCSFEQPAEGTPRSPVHVQLESEYVHGARRKKKMSPPCISIDPPMEDESGAASRTKAS
ENSLLRRRTPSCESAAYRDSLDLAENPPGEQPSKAERRVQPLCRGEHLAIPNFSFEQSDA
SSLSSLSELLLDSGQSSPSSGESRPDPAALELTQLEPLQTQCNHPETNKELLVVTKSPLQ
KHGLVSTTVATDEDVEEPV
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggcgggaggagcgcgcccttcccgccgccggccggcggggaggtgcgggtg
cccatcgcctgccggcccgcgcgggacgaggatgccctcagcgccggcaagcccgtccgg
ggcagcccgggctcccgcagccgggacgcgggctcggaggaggaggagcaggtcccgtac
ccggcactggcgcccaccgtcttcttctgcctccagcaagccacccggccgcgcagctgg
tgcctcagactggtctgtaacccctggttcgagcacgtcagcatgctggtcatccttctg
aactgcgtcacgttgggcatgttccagccctgcgaagatgtgaagtgcaagtccgagcgg
tgcactatcctggaggcatttgaccacttcatctttgccttctttgctgtggagatggtc
atcaagatggtagccttggggatcttcgggcagaagtgttacctgggagatacgtggaat
cgcctggacttcttcatcgtaatggctggcatgttggaatattcgctggatggacacaat
gtaagcttatccgccatccgaaccgtccgggtactcaggcctttacgagccattaacagg
gtcccaagtatgcgaatactcgtcaccctgctgttagatactctgcctatgttaggcaac
gtccttctcttgtgcttctttgtcttcttcatctttgggatcgtcggcgtccagctctgg
gcagggctgctgagaaacaggtgtttcttcgacagcaattttgcaatgacatataaccta
actttcctgcatccgtattatcagccggacgacggagaggataatccattcatctgctcg
tcccatcgggataacggcatgcagaaatgctccaatatcccaaacttgaagcatctcaaa
gtggagtgcaccttgagcatggacccctacaccccaaatttgtataacccagatttcagc
aacagaaatgcctgcataaactggaaccaatattacaacgtatgcatggcaggggatgtg
aacccacataatggagctattaattttgataatattggctatgcctggatagctattttt
caggttataaccctggaaggatgggttgacatcatgtattatgttatggatgcacattct
ttttacaattttatatattttatattgcttataatagttggttctttcttcatgattaac
ttgtgcctggttgtgatagcaacacagttttctgaaacaaaacagcgggagaaccagctg
atgcaagagcagcgggcccgctacctctccaacgacagcacaatcgccagtttctcggag
ccgggcagctgctacgaggagctgctcaagtatatctgccacatcttcaggaaggtgaag
cgccggacgttacgcctgtacaacaattggcagagcaagcgccggaaaaaagtcaacccc
aacagcaccaccaacgggcagagccgccggggcaggaagcgcatcacctctatccatcac
ctcatccaccaccaccaccaccaccaccaccaccactaccacatcagcaacggcagcccc
cggggcccacgctccaacccggagatctgtggcctggagctgaaggtcatgaagccagga
ggccaactcatgcttccccctccgtcgcccaatttgcagagccctcccgctcccgattcg
gagtcggtccatagtatttaccatgccgactgccacgtcgaggccccccaggtgaaatgc
aagtcttccaacacccccgcgagtattaagctggctgctgggctcaccagccacggcaac
atgaactacccaaccatcctgccttctccggctagcaaagccaactcggtcccagggccc
aaaggaaagaaaaacggcagctcgcccgtgcccatggtgagcagcccggtgcgcttgaac
gcggattcgtttgggaagctgcagcacctgatgggagagcacggtctgcgcagggcatcc
agcaggctgtcggggttgaacgtgccgtgcccgctgcccagcccccaggccagcatgctg
acctgcgagctccagaactgcccctattgcgccagcatcctggaggaccccgagttcgag
ttcagcgagtccgacagctacgactccgacaacaacggcgtgtacgagttcacgcaggac
ctgcggcacggggaccagcgggatcagattcagcagcagaggaacaagaggaggaagaag
aagaagaaacccaaggagaggaataaagcggccaggctgtggtcggctttcggcaacaag
ttgaaaaagatcgtggagagcaagtatttcaaccgggggattatgatcgccattctgatc
aacacgctgagcatggggatcgagtaccacgagcagccggatgagctgaccaacgccttg
gagatcagtaacattgtcttcaccagcatgtttgccctggagatgctcctcaagctcctg
gcctttggcatcttcggttacatcaagaacccatacaacatcttcgatgggatcatcgtc
atcatcagcgtctgggagatcatcggccagtcggatggaggcctttctgtgctacgaact
tttcggctgctcagagtcctcaagctggtgcgtttcatgcccgctcttcgccgtcagctc
gtggtcctgatgaagacgatggataacgtggccaccttctgcatgctgctcatgctcttc
atattcattttcagcattctcggcatgcatctttttggatgcaagtttagcttgaaaaca
aagacgggggacaccgttccagacagaaagaactttgattccttgttgtgggccatcgtg
actgtctttcagatcctcacgcaagaagactggaacgtggtgctctacaacgggatggca
tccacctcctcgtgggccgcgctgtacttcgtggccctgatgaccttcggcaactacgtt
ctcttcaacctcctcgtagccatcttagtcgaaggcttccaagcagagggtgatgccaac
aggtcagacacggatgaggacaagacatctgccaacttcgatgaggattttgagaagctg
aaagacctccgggcagcagagatgaagatgtactctttggccgtcaccccaaatggacac
ttggaggcccggggaagcatgcctccgcccatcatcatgcgcaccgccgctacgcccatg
cctacgcccaagtgctcgccgcacatggactcggtgcacacctttgtggactcgaggaga
gggagcaatgcctcgatagatcccctgagctacgaccaaaagtccttgtccagcctccgc
agctcaccctgtgcaaactggggacccagcagcaactggggaagccggcgctcaagctgg
aacagcctaggccgggccccgagtctcaagaagaagaaccagtctggggaaagggagtcc
ctgctctccggagaggggaaagggagcacggatgatgagtctgacgatgccaagtccagc
actgtcagcagggcatccttgcaccgccgagcagagtccttggactacaggagctccttg
gacttgcccgagcttctccagttgcccagcatgcgccattccctcagcatcaaccccatg
gccatgctgcccaccgagtaccaggactgcaacggcaaaatgatgcacgtgcccaacgag
tttttcctgcgcattgacagccacaaggatgaccccttggactacgacgacgacatggag
gatagttactgctacaggatccgcaaaatgctggagccctacaagccagagtggtgcaag
aatcacgaagactggtccctctacttgttttctccacaaaatcggtttcgagccatgtgt
cagaaggtgatcgctcacaaaatgtttgaccacgtggtgctcgtcttcatcttcctcaac
tgcatcacgatcgctctggagaggcccgacatcgacccccacagcacggagaggatattc
ctcagtgtctccaattatatcttcactgcgatctttgtggctgagatgatggttaaggtg
gtggctctcggcttcttctctggagaaaacacctatctccaaagcagctggaatgtcctc
gatggggtcctggtctttgtctccatcatcgacattattgtctccatggcatcggccggc
ggggctaagattctgggcgtccttcgcgtcttaagattgctgcgaaccttgaggcctctc
cgagtcatcagcagagcccctggtctgaagctggtggtagagactttgatatcatctctg
aggcccattgggaatatcgtgctcatctgctgcgctttcttcatcatctttgggatatta
ggagtgcagctttttaaaggcaagttctactcctgcgaagggtcagacaccaagaacatc
accacgaaagccgactgcaccaatgcacacttcaagtgggtccgacggaagtacaacttt
gacaacttaggacaggctctgatgtccttgtttgtcctttcatccaaagatggctgggtg
aacatcatgtatgacggcctggacgctgtgggcattgaccagcaggtagctaccaaagat
atcctgaggtttttccctggcattcaatgcgaaagtgcttggagtacagagagtgaggag
gttatttgcgggcctgaggagacgcttgccgttgggtcatacgtgcctcgtgctggtgac
agggagccatgctcattgctttgccttggcttctctctttctacagaagcccagcgccga
ccctactacgctgactattccccagcacggaggtacatccataccctttgtaccagccac
tatctggacctgttcattaccttcatcattggtgtcaacgtcatcactatgtccatggag
cactacaaccagcccaagtccctggacgaagcactgaagtactgcaactatgtgttcacc
atcgtttttgtgtttgaagctgttctcaagttggtggcatttggttttcgacgattcttt
aaagacagatggaaccagcttgacctcgccattgttctgctttccatcatgggcatcacc
ctggaggagattgaaatgaatgcggcgctccccatcaatcccaccattatccggatcatg
cgggtgctgagaatagcaagagtactgaaactgctcaaaatggccaccggcatgcgagct
ctcttggacaccgtggtgcaggcgttgccccaggtagggaaccttggcctactttttatg
ctcctgttttttatctatgctgccctgggagtggagttgtttggaaagctcgattgcagc
gaagacaacccctgcgagggcttgagccgccacgccaccttcaccaacttcggcatggcc
ttcctcactctcttccgggtctcgaccggagacaactggaacggcatcatgaaggacacg
ctccgagagtgcacccgggaggacaagcactgcctcagctacctgccggtcatctccccc
gtctacttcgtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggcc
gtgctcatgaaacacctggaagagagcaacaaagaagccaaggaggatgccgagatggac
gccgagatcgagctggagatgtcccgtggcgctgccaccccagccagcagcgggggtgga
gggggcaccgctgcctccgatggcagggccccatacgggagccaggagggcgggaagctg
gagacacccctgcgagtgaaacaacaggcactggaggcactgagctgtgagaacgtgtct
ttagccatgccaggctcagacccgctggagggcggagagactcccgtgatgccacacacg
tccttctgctctgttcctcaccaccatgtcccgacaccttcccacaaagcccccggccac
gagtcagaggaaggggctgcctgcctctgggcgaagaaggagtcgcaaaacttcctgact
gtccgcaagatctcggtgtccaggatgcactccttgccgaacgacagctacatgttccgc
cccgtgatgcccgccaagccgccgtacccgctgcacgaggtggagatggagagccacccc
tgcaagtcacagagagggtccatcacctctacccggtcccagcccgtggggacaagctcc
tctctgcgaatccccaccgagtgtcttcagctgacccccggaccgtcgtaccgcaacgcc
cgcgacctttggaagatccaccccccgacggccgccccgcgatctcccagcctcaaccgg
ctgctgtgtaggcaggaggccatcaggacagagtccgtggatgggcagaaagcagaggcc
aaggacaacgtgcaggtggagtccggcgagagcctgcagccgaagaagccgtcccagagc
accctaagcccccctccgctgcatcctgccccccgctccctgccaggcaccccgccgcat
tcccctgcctcgccctcaccccacaggcactccagtgtctgcacgcgcaagcacacgtgt
agccagcacagtattcccagctgggcttcgagcgagagcagcgacccgctgcgccctgag
aactcgctcttcgagtcctcggacctggcggacgaagaggtcagccacatcaacagctcg
gcgaaagactggcgggaggcgcccgggtcgaggagcctctccgtctccccttttgcctcc
ctggcttcctcgccagcccaccacaagaactgcagcacaaccagcctggcagggagcggc
ggcagccgagagaaggacttgaagaagttttacagtgttgacacgaaaggcttcctggac
aagcccagctgggcagacaaccaaagacggcactccatcgagatctgtccctcgctggac
gatggagactgcagctttgagcagccggcggagggcacgccgcgctcccccgtccacgtt
cagctcgagtccgagtacgtccacggggctcggcggaagaagaagatgagcccgccgtgc
atttctatagatcctcccatggaggacgaaagcggcgcggcctcccgtaccaaagcatcc
gagaacagcctgctgcggaggaggacgccctcctgcgaatccgcggcctacagagattct
ctggacctggccgaaaacccgccgggggagcagccctcgaaagcggagcggcgggtccag
ccgctgtgccgaggggagcatctggccatcccaaacttctccttcgagcagtcggacgcg
agctccttgagcagcctctcggagctcctgctggacagcggccagtcctcgccttcctcc
ggggaatcccgccccgatcccgcggcgctcgagctcacgcagctggagcctttacagact
cagtgcaaccaccctgagacaaacaaggagctcctcgtggtcacgaagagccccctccag
aagcacggactggtctctacgaccgtcgcgacagatgaagacgtagaggaacctgtatag
DBGET
integrated database retrieval system
