Crocodylus porosus (Australian saltwater crocodile): 109314841
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Entry
109314841 CDS
T07440
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03430
Mismatch repair
cpoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109314841 (PMS2)
03460 Fanconi anemia pathway
109314841 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109314841 (PMS2)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109314841 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109314841
NCBI-ProteinID:
XP_019397720
Ensembl:
ENSCPRG00005005175
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MELEACPPPAAAIRALDRPSVHRICSGQVVLSVGTAVKELLENSLDAGATHVDVKLKDYG
AELIEVSDNGCGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVTI
FTCHKSAKVGTRLVFDHNGKITQKTPYPRQQGTTVSIQQLFYTLPVRHKELQRNIKKEYA
KMVQILQAYCIISTGVRITCTNQVGQGKKHTVVCTPGSSSLKENIGAVFGQKQLQSLISF
AQLLPSEAVCEEYGLSSVDMPHSLYTITGFISHCDHGVGRSTTERQFFFINQRPCDPTKV
SKLVNEVYHMYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKVLLAILKTSLMDM
FGSDVNKLNINQKLLDIAGNLKKRLPEETETSKAETLLGSASQNPSRELKRGMTITRLRE
SFSLHQMTEDSFGSPKNVKQQHSSPGHRYLSDLSTSSPVNSQKSDPNKETDCWSAVDLNT
HTIIGTNLKKLENDTDSGHGSTSAESKVSFSTPEVGSCLSSESTDASPDEEFHISDENLQ
SGCLETVTCAEESLECDVQLSGNVCKLNQVSDQKERRGFLPNSFPNMKRFKSKKEDLKGT
TCPELKYAQNPAPGLHADVLIEVQKKTVTLEFSMNTLAERVKKLTQLQQKNTEMLNYRRF
KAKISPGENKAAEDELRKEIRKEMFANMEIIGQFNLGFIIAKLKSDLFIIDQHATDEKYN
FEMLQQHTVLQGQKLIAPQNLNLTAVNETILIENLEIFRKNGFDFVIDENAPVTQRVKLI
SLPTSKNWTFGPQDIEELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVNEMK
KLITHMGEIEHPWNCPHGRPTMRHIASLDLISPE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaggcctgtccgcctcccgccgcggccatccgggccctggaccgcccgtcc
gtgcaccgcatctgctcggggcaggtcgtgctgagcgtcggcaccgccgtgaaggagctg
ctggagaacagcctggacgccggcgccacgcacgtcgatgtaaaacttaaagattatgga
gcagaacttatagaagtttcagataatggttgtggtgtagaagaagaaaacttcgagggc
ttgactttgaaacattatacttctaagatacaagatttctctgatctaatacatgtcgaa
acatttggatttcgaggtgaagctctgagttcactgtgtgcattaagtgatgttaccatt
tttacttgtcacaagtctgcaaaagttggaactcgtctggtatttgatcacaatgggaaa
attactcagaaaactccttacccacgacagcaaggaacaactgttagcatacagcaatta
ttttatactctgccagtacgacataaagaacttcaaagaaacattaagaaggagtatgca
aaaatggtccagatactgcaagcatattgcatcatttcaacgggagttcgaattacctgt
accaatcaagttggtcaagggaaaaaacacactgtggtatgcacccctgggagttcaagt
ctgaaggaaaacataggagcagtatttgggcaaaaacagttgcagagtcttatttccttt
gctcagctacttcctagtgaagctgtttgcgaagaatatggcctcagctctgttgacatg
ccacacagtctgtataccattacaggcttcatttcccattgtgatcatggtgttggaagg
agtacaacagagagacaattctttttcatcaatcagagaccatgtgatccaacaaaggtt
tccaagcttgtcaatgaagtttaccacatgtacaataaacaccaatatccatttattgtt
ctaaatatttgtgtagattctgaatgtgttgacatcaatgttacacctgataagaggcaa
attttacttcaggaggagaaagttttgttagcaattttaaagacttctctgatggatatg
tttggtagtgatgttaataaacttaacatcaatcaaaagctgctggatattgcaggtaac
ttgaaaaaaagacttccagaagaaaccgaaacgtctaaggcagaaacattgcttggttct
gcatctcaaaatccaagcagggaattaaaaagagggatgactattaccagattacgggag
tcattctcactccatcaaatgacagaggacagctttggaagccctaaaaatgtgaaacaa
caacacagctcccctgggcacagatatttgtcagatctttccacttcaagtcctgtaaac
agtcaaaaatctgaccccaacaaggagactgattgctggagtgcagtggacttaaacaca
catacaattattggcacaaatttgaagaaattagaaaatgacactgattctggacatggt
agtacttctgcagaatcgaaagttagttttagcactccagaagtaggtagctgcctcagc
agcgaaagtacagatgcttctcctgacgaagaattccatatatcagatgaaaatctccaa
agtgggtgtcttgaaactgtaacctgtgctgaggaatcattggaatgtgatgtccagctt
tcaggaaatgtatgtaaattgaaccaagtgagtgatcaaaaagaacggagagggttcctt
ccgaattctttcccaaatatgaagcgttttaaaagtaaaaaagaggacttaaagggaact
acctgtccagaactaaagtatgctcagaaccctgcgccaggactacatgctgatgtactg
atagaagttcaaaagaaaactgtgacacttgagttctcaatgaacactttagcagaaaga
gtgaaaaaacttactcagctccaacagaaaaatacagaaatgctgaattacagaagattt
aaggcaaaaattagtcctggagaaaataaggcagcagaggatgaattaagaaaagagata
cgtaaagagatgtttgcaaacatggaaattattggtcagttcaatttagggtttataatt
gccaagctgaagtctgacctcttcataattgaccaacacgctacagatgagaaatacaat
tttgagatgttacaacagcacaccgttcttcaaggtcagaagttgatagcgcctcaaaat
cttaatttaactgctgtaaatgaaactatattgatagaaaacttggagatatttagaaaa
aatggatttgattttgttattgatgaaaatgctcctgtaactcaaagggttaagctgatt
tctttgccaacaagcaaaaactggacttttggtcctcaggacatagaagagctgatcttt
atgctaagtgattgtcctggagtcatgtgtaggccatccagagtcagacagatgtttgct
tctcgagcttgtagaaaatctgtgatgattgggactgcacttaatgtaaatgagatgaag
aaactgatcacccacatgggtgagattgagcatccttggaactgtcctcatggaaggcct
accatgaggcacatagccagtttagacttgatttctccagaataa
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