Crocodylus porosus (Australian saltwater crocodile): 109314972
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Entry
109314972 CDS
T07440
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109314972 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109314972 (DDX5)
03009 Ribosome biogenesis [BR:
cpoo03009
]
109314972 (DDX5)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109314972 (DDX5)
Spliceosome [BR:
cpoo03041
]
Complex A
U1 snRNP components
U1 related factors
109314972 (DDX5)
Complex B
109314972 (DDX5)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
109314972 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
109314972
NCBI-ProteinID:
XP_019397924
Ensembl:
ENSCPRG00005000804
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGLLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEITVKGHTCPKPLINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFNSFSRERENFERTYGAVGKRDFGAKAQNGAYSAQSFSNGTPFGNG
FAAAGMQASFRAGNPAAGAYQNGYDQQYGSNMANMHNGMNQQQYAYPATGTAPMIGYPMP
ASYSQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtactccagcgaccgggaccgagggtttggagcccctcggtttggtgggagt
cgaggcggcctcctctccgggaagaaatttggcaaccccggggagaagcttaccaaaaag
aaatggaacttggatgaactgcccaaattcgagaagaatttttatcaagagcatcctgat
gtagttcggcgtaccgcgcaagaggttgaacaatacagagcaagcaaagaaattacagtt
aagggccatacctgtccaaaaccactcataaacttttatgaagctaactttcctgcaaat
gttatggaggtaattcagaggcagaattttactgaaccaactgctattcaagcccaggga
tggcctgttgccttgagtggtttggatatggttggagtagcacagactggatcagggaaa
acgctgtcttacctgttgcctgccatagtgcacataaatcatcagccattcctagagcgg
ggagatggacctatttgtctggtgctggcaccaactcgagaactggctcaacaagtgcag
caagtagctgctgagtatagtagagcatgtcgtttgaagtccacgtgtatttatgggggt
gctccaaaaggaccacagatccgtgacttggaaagaggtgtggaaatttgcattgccacg
cctggaagactcatagacttcttagaagctggaaagactaatctcaggaggtgcacttac
cttgtgcttgatgaagctgacagaatgcttgacatgggatttgaacctcagatcagaaaa
attgtagatcagataagacctgataggcaaaccctgatgtggagtgcaacgtggcccaaa
gaagtcaggcagcttgctgaagacttcttgaaggaatatgtacatattaacattggggca
ctggagctaagcgcaaaccacaacattcttcaaattgtagatgtatgtcatgatgtagag
aaagatgacaaacttattcgattaatggaagaaatcatgagtgagaaagagaacaaaacc
attgtgtttgtggaaaccaaaagacggtgtgatgaccttaccagaaaaatgaggagagat
gggtggccagcaatgggtattcatggtgataagagtcagcaggagcgggactgggttcta
aatgaattcaaacatggaaaagctccgatcctgattgccacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattt
tttactcctaataatataaagcaagtaaacgacctcatctctgtgcttcgtgaggctaat
caagctatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccgg
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttaatagttttagtaga
gaaagggagaactttgaaagaacatatggtgcagtaggaaagagagacttcggagcaaaa
gctcaaaacggggcctacagcgctcaaagctttagtaatggaactccatttggaaacggt
tttgcagctgctggcatgcaggccagcttcagggctggtaatcctgctgctggagcatac
caaaatggctatgatcaacaatatggaagtaacatggcaaatatgcacaatggcatgaac
caacagcagtatgcgtatcctgccactggtactgctcccatgataggctacccaatgcca
gcaagttattctcaataa
DBGET
integrated database retrieval system
