Crocodylus porosus (Australian saltwater crocodile): 109315238
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Entry
109315238 CDS
T07440
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109315238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109315238
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109315238
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109315238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
PRY
U-box
zf-Nse
Sina_RING
Baculo_IE-1
RRM_5
Motif
Other DBs
NCBI-GeneID:
109315238
NCBI-ProteinID:
XP_019398379
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MNNTSLYFLKDKVMCPLCLELFTDPVTTACGHNFCMDCLQNYWDHQAMIGESPYCPQCQE
PFSSRPRLCQNINLGEIAKLAQEVPAMTKLPPAGPNNIPCDFCSSRKLKPIKTCLQCTPS
LCETHTQLHYKDKAYRSHQLLEPISDLKARLCLKHHKLQKQNCWAEGGFLGRTRLQEGRR
DHEAVPLQGERATKAVETEQIQVNVENQIIMMASDNHRHKGRIIYLMRVVKSARDEVNQT
FAEIIKELKIMQVKVLEFLDKEERAALVQMGNSIQQNQVKLADLWKQSLWMTGLLENTSD
QQFVQEFPKLKQLGACPEPVVSLKCEESSSFTGVKQMLSDLKAQLAVVALHFVDKILKTG
ITMQPYEVIPPNMDRKTLLKYYCNLNFDPNTVSEELLLFKETHSVLNIGIMLESSSMPCQ
GFNHWPQVLCTPSLCGGCHYWEVEVSDSWLCLGATYSYAHRTGKNYIYLIGRNSTSWCLE
WDSLKFSVWHNNIQTVVKGSYYQTVGIFLDYAAGSLTFYGVTNTVNLIYHFLTTFTEPLY
PAAMVSGGGSLFLRQHPK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacgagcttatattttctcaaggacaaagtcatgtgccccttatgcctggag
ttgttcacagaccccgtcaccacagcctgcgggcacaacttctgcatggactgcctgcag
aactactgggaccaccaagccatgatcggagagagcccctactgcccgcagtgccaggag
cccttcagttcaaggcctagactctgccaaaacatcaacctgggagaaatagcaaagctc
gcccaggaggtcccggccatgaccaagcttcccccagcgggtcccaacaacatcccctgt
gatttctgctcctctaggaaactcaagcccatcaagacctgcctccagtgcacaccctcc
ttgtgcgagacccacacccagctacactacaaagacaaagcatacagaagccaccagctg
ctggagcccatcagtgacctgaaagccaggctgtgcctcaagcaccacaagctgcagaag
cagaactgctgggcagagggcggcttcctcggtcgcacccgcctccaggaggggcgcagg
gaccacgaggcagtccccttgcagggggagagagccacgaaggcggtggaaactgagcaa
atacaagtcaacgtggaaaaccagatcatcatgatggcctccgacaatcacagacacaag
gggaggatcatctacctcatgagagtggtcaagagtgcacgagatgaggtgaaccagacc
tttgcagagattattaaggagctcaagatcatgcaggtgaaggtgctggagtttttggac
aaggaggagagagcagctctcgtccagatggggaactccattcagcagaatcaagtgaag
ctggccgacctctggaagcagagcctctggatgactggcctcctggagaatacaagtgac
cagcagttcgtgcaggaattcccaaaactgaagcagctgggagcctgcccagagccagtg
gtcagcctgaagtgtgaggagtcctcgagtttcacgggcgtcaagcagatgctgagtgat
ctgaaggcccagctagcagtggttgctctccactttgtcgataaaatccttaagacaggc
atcaccatgcagccctatgaggtgataccacccaatatggacaggaagaccctcctgaag
tactattgcaacctgaactttgaccccaacaccgtcagcgaagagctgctgttgttcaag
gagacccactcagtgctgaacatcggcatcatgctggagtcctcctccatgccctgccaa
gggttcaaccactggccacaggtcttgtgcaccccgagtttgtgcggaggctgccactac
tgggaggttgaggtctcagattcgtggctctgcttgggagccacctacagttatgcgcac
aggaccgggaagaactacatctacttgataggcaggaacagcacctcatggtgcttggag
tgggactcgctcaaattctccgtctggcacaacaacatccagacggtggtgaagggcagc
tattaccaaactgtcgggatcttcctagactatgctgctggctccctgactttctatggg
gtcaccaacaccgtgaacctcatctatcacttcctgaccacgttcacagaaccactgtac
cccgctgccatggtgagtggcggaggttcacttttcctgaggcagcacccaaagtag
DBGET
integrated database retrieval system
